Labeo rohita (rohu): 127170526
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Entry
127170526 CDS
T09007
Symbol
fer1l6
Name
(RefSeq) fer-1-like protein 6
KO
K22127
fer-1-like protein 6
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lroh04131
]
127170526 (fer1l6)
Membrane trafficking [BR:
lroh04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
127170526 (fer1l6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C2
Ferlin_C
FerB
dsrm_Ferlin
FerI
dsRBD2
Motif
Other DBs
NCBI-GeneID:
127170526
NCBI-ProteinID:
XP_050974497
LinkDB
All DBs
Position
9:11098482..11121976
Genome browser
AA seq
1818 aa
AA seq
DB search
MDRDKDGAASYGKKFGIKVKKKHRKGQKGVVIANKNALEAEPETNPDNPDVVDVPQPELS
KASTSAHVSLRQTANIKRSKPVAKILEGEGKPQHFQISINITEARQLVGDNIDPSVVIEI
GDEKKQTSVKEGTNSPFYNEYFVFDFFCNQNIFFDKVIKLSVMHSKIMKSYCVGTFKIDV
GTVYAQPGHQFINKWATLTDPADIRTGVKGHLKCDISVSGKGDVATPSQKFSDAEEQIEK
HLLLPEGLNPERPWARFYVIVYRAEGLPRINSSIMANVTKAFVGDTTALIDPYVEVSFFG
QVGRTSTQKSTADPVWNEQVVFKEMFPPLCQRLKIRVLDEGSMNDVAIGTHYIDLHTISN
DNDGDNGFLPTFGPAWINLYGSLRNSTLVDDSQELNEGVGEGVSYRGRVYIELSVEILSG
GAPDSKSLLSRISLKDAKGGKAGAKDPKTGTGPGGEEEKSKTIGPEVMPVEPPQKINDED
METFLLFGCVFEASMIDRRTSDRPISLEFTIGNFGNLIDGAAPPPSKKKPEDVSLTTPLL
DTAATMPCKSTTTPERPLFGDAQRHYMHLPIGAQKPCVYIYSSWEDRAYRLHHANMLDTI
ALMFEDGVTKVAELDKMLSPEAGTLMHHVLQEFKKDASEFIAFAEKKVKGSNLTLLDKKR
LTLCKQELESMSEIAGGLLEPKRRSLTVKEMMLEAQKIKKKLRFLVEEPQHTLPDVFVCL
LSNNKRLAYARIPARHLLFSQSPEQRGRDCGKIKTLFLKPPVKRGPGWTVQAKLDVYLWL
GTSRDSSHMLENLPSGFEPEHISSEDRTGHPPAYILYTEKHLFQLRAHMYQARGLIAADN
TGLSDPFAWVSFQSNSQSTGIIKQTLTPTWNQLILMNNVCLYGGLYDIVQEPPLVVIEVY
DDDAVGIEYLGSTMAVPVVKLSDEQYSPPQLQYSPLFCGSLSGGDILGAFELLQISKSGE
HTLPDLDEPDGGVTPVPSYIRPVLCKYRIEVLFWGLRELKKVQLLSVDRPQVFIKCAGGG
VNSSVIQSYKKNPNFTILVDAFDVELPEDEHLLPPLTVTVVDWRAFGRSTLVGSHMINNL
ALFKHIPTPVQQPLPEPRNIAVAQLSLQQSVVPPPNEEIAIEIEQEEIIAPAPKTEPDVQ
EKKVSKKSKTRSTKRKKRTTADESADNVIDWWSKYYASMEKIQLAKQKENNPFPLLFENI
TPLENIISEGLISLASNVKDKKKEVNFKSVIEQPRLATLQVYDKELEAEFGPFDDWVKTF
ELYRGKANEEEGSADDRFVGKFKGRFCLYKLPEADGEEEEGYLDSGQFKINQGIPPNTPV
EVLIRVYIVAAFNLHPADPDGKADPYIVLKLGKTEIKDRDNYIPKQLNPVFGRSFEFQAT
FPKESLLTVLIYDYDMVGGDDLIGETQIDLENRFYSRHRATCGLPAEYAIEGYNAWRDSI
QPTELLIKLCKENRLDNPHFSPGRITIGNKVFTGKTVFADEDQMVESYEHLALKVLHRWS
EMPNGGCKLVPEHIETRALYLRDKPGIDQGHLQMWVDIFPMDMPYPGPPVDISPRKPKGY
ELRIIIWNTEDVILEDTNFITGQKSSDIYVKGWLKGLEDDSQETDVHYNSLTGEGNFNWR
FVFPFNYLPAEKVVVVQKRDSIFSLDKTEQKIPAVLVMQVWDFERLSSDDFLGSVELDLH
GFPRGAKSAKACKMEMLTEITDNISIFQQKRSKGWWPFVKAGELTGKVEAEFHLVTAEEA
EKNPVGRARKEPEPLEKPNRPDTSFSWFMNPFKCFFHLIWGNYKKYIIGGLVLLIVALFL
VLVFYTLPGAISSKIVNG
NT seq
5457 nt
NT seq
+upstream
nt +downstream
nt
atggaccgagataaagacggcgctgcgtcgtatggcaaaaagtttggaataaaagtgaag
aagaaacacaggaaaggacagaagggtgttgtaatcgcaaacaaaaatgctctagaggca
gagcctgaaactaatcctgacaatccagacgtggtagacgtaccacagcctgaactctct
aaagcgtccacctcggcacacgtttccctcagacagactgctaatattaagaggtctaaa
cctgtggccaagatcttggaaggtgaaggcaaaccacaacatttccagatctccatcaac
ataacagaggctaggcagctagtcggggacaatatagaccctagtgtcgtgattgaaatt
ggagatgagaaaaagcagacgtctgtgaaagaaggaaccaactctcccttttacaatgag
tactttgtgtttgacttcttttgcaatcaaaacatcttttttgacaaagtcatcaaacta
tcagtcatgcattcaaagataatgaagagctactgtgtgggaacctttaagattgatgtt
gggacagtttacgctcaacctggccatcagttcatcaataagtgggccacactcacagac
cccgctgacatccgcacaggggtgaaaggtcacctgaagtgtgacatcagcgtgtcagga
aaaggagatgttgcgacaccatcccagaagttcagtgatgctgaagaacagatagaaaag
caccttctgcttcccgaaggcttaaaccccgaacgtccgtgggctcggttttacgtgata
gtgtaccgtgcagaaggtcttcccagaataaactccagtattatggccaacgtgaccaaa
gcctttgttggagacacaacagctctcatagatccttatgtagaggtgtcattcttcggt
caagttggcaggacatctactcagaagagcacagcagacccagtgtggaacgagcaggtg
gtgtttaaggagatgtttcctccactgtgtcagagattgaagattcgggttctggatgag
ggaagcatgaatgacgtggccattgggactcattacattgatttacacaccatctcaaac
gacaatgatggagacaatggttttctgcccacattcggaccggcatggatcaacctctac
ggttcacttcgtaattccacactggtggatgacagccaggagctgaacgagggtgttgga
gagggggtgtcctacagaggcagggtttacattgagctcagtgtggagatcctgtctgga
ggtgctcctgactctaaatccctgctttcaagaatcagtctgaaagatgccaagggagga
aaagcaggggcaaaagatcccaaaactgggacgggacctggaggtgaggaagagaagtcc
aagactatagggcctgaggtgatgccagtggagcccccacagaagataaatgatgaagac
atggaaaccttcctgctctttggctgtgtgtttgaggcttctatgattgacagaagaacc
agtgatagacctatcagccttgaattcaccattggtaactttgggaacttaattgatggt
gctgcgccgcctccttcaaagaaaaagcctgaagatgtgtcactgaccactcctctgttg
gacactgcagcaacaatgccatgcaaatccactacaacaccagaaaggccacttttcgga
gatgcacagaggcactacatgcacttacctatcggagcgcaaaagccctgtgtgtatatt
tatagcagctgggaggatcgagcgtaccgactccatcacgccaacatgctggacacaatt
gccctgatgtttgaggatggagtcactaaggtggcagagttggataaaatgttgtctcca
gaagcagggactctcatgcaccatgttcttcaagaatttaaaaaagatgccagtgagttt
attgcttttgctgaaaagaaggtgaagggaagcaacctgaccttactggacaaaaagagg
ctcactctgtgcaaacaggagctggagagcatgtctgaaatagcaggaggactgcttgag
cccaagaggagatctttgactgtaaaggagatgatgctggaagcccaaaaaattaagaag
aaactgagattcctcgtggaagagcctcaacacactttaccagatgtgtttgtgtgcctg
ctcagtaataacaagcgtctggcgtatgccagaatccctgctcgtcacctgctcttctca
caaagcccagagcagagaggccgagactgtgggaagattaagaccctgttcctcaagcct
ccagtgaagcgtggaccagggtggacagtccaagctaaactcgatgtgtatttatggctg
ggaactagcagagattcatctcacatgttggaaaatctcccatcaggctttgaaccggag
cacatctcatctgaagacaggactggccatcctcctgcttatatactctacacagagaag
cacttattccagctgagggctcatatgtatcaggctcgtggtctcattgcagcagacaac
actggactctcagacccctttgcctgggtgtcttttcagtccaacagtcaaagcactggt
atcatcaagcaaacattgactcccacatggaatcagctgatcctgatgaataatgtgtgt
ctgtatggagggctttatgatatagtccaggagccaccgctagttgtgattgaagtgtac
gatgatgatgcagtggggatagagtacctggggtcgacaatggctgttcctgtagtcaaa
ctgtcagatgaacaatactccccacctcagttgcagtatagccctctgttctgtggcagc
ctgtcaggcggagacattctgggagcatttgaactccttcagatctcaaagtcaggagaa
cacacacttccagatttagatgagccagatggaggggttaccccagtaccctcatacatt
cgacctgtgctctgcaagtacagaattgaggttttgttctggggcctccgagaactgaaa
aaagttcagcttttatctgtcgatcggccccaggtttttatcaagtgtgcgggaggaggc
gtaaactcttcggtgatacagagttacaagaaaaacccaaacttcacaatacttgtagat
gcctttgatgtggagctgcctgaagacgaacacctcctccctcctctcactgtcactgtg
gtggactggagggcctttggccggagcacacttgtgggtagtcacatgatcaacaacctg
gccttattcaaacacatccctacacctgttcaacagcccctaccagagcccagaaacata
gcagtggctcagctgtctctgcagcaaagtgttgtgccaccacccaatgaggaaatcgcc
attgaaatagagcaagaggaaattatcgcccctgcccctaaaactgagccagacgtccag
gagaagaaggtatcaaagaagagcaaaacaagatctacgaaaagaaagaaacgcactaca
gctgatgagtctgcagataacgtcattgactggtggtcgaaatactatgcatcaatggag
aagatccaactggcaaagcaaaaagaaaacaatccatttccactgctcttcgaaaatata
actcctctggagaacattatttccgaaggattgatcagtctggcttcaaatgttaaggac
aagaaaaaggaggtgaatttcaagagtgtgatagaacagcccaggcttgcaacattacag
gtgtatgacaaagagctggaggctgagtttggcccttttgacgactgggttaaaaccttt
gaactctatcgaggaaaggccaatgaggaagaaggttctgctgatgatagatttgttggg
aagtttaagggcaggttctgtctgtacaagctgcctgaagcggatggggaagaggaggaa
ggatatctggattctgggcagtttaaaataaaccagggtattcctccaaacacaccagtt
gaagtccttatccgtgtatacatagttgcagccttcaacctgcaccctgcagacccagat
ggcaaagcagatccttacatagtgctgaaactagggaaaactgagatcaaagacagagac
aattacatcccaaagcagctcaacccagtgtttggacgatcctttgaatttcaagccact
ttccctaaggaatccctgctaactgttctcatctatgactacgacatggttggcggtgat
gatttgattggagaaacacagattgatttggagaaccgattttacagtaggcatcgagct
acctgtggtctgcctgctgaatatgccattgaaggttataatgcatggagggacagcatc
cagccaacagaactgttgattaagctttgcaaagaaaacagactggacaaccctcacttt
tctccaggacgcattaccattggcaacaaagtttttacagggaaaactgtatttgctgat
gaagatcagatggtggagtcatatgagcacctggctctaaaggtgctgcacaggtggtct
gagatgcccaatgggggttgtaaacttgtgccagagcatattgaaactcgtgcactctac
ctcagggacaaaccagggatagaccagggtcatctgcagatgtgggtggacatttttcca
atggatatgccttatcctggccctcctgtggacatttcccctcgcaaacccaaaggttat
gagctgaggatcattatctggaatactgaagatgtaatactggaagacaccaacttcata
acaggacagaagtcaagtgacatttacgtcaaagggtggttaaaggggcttgaagatgac
agccaggaaactgatgtccattacaattctttgactggagagggcaacttcaactggcgc
tttgtgttcccctttaactacctgccggctgagaaagtggtggtggtgcagaagcgagac
agcatcttctctctggacaaaactgaacagaagatccctgcagtccttgttatgcaggtg
tgggactttgagaggctttcttctgatgacttcttgggctcagtggagttggatctgcat
gggtttccacgtggagctaaatcagctaaagcttgtaaaatggaaatgctgacagaaatc
acggacaacatctccatcttccagcagaaacgctccaaaggctggtggcccttcgttaaa
gctggagaactcacagggaaggtagaagcagaatttcatctggtaacagctgaagaggca
gagaaaaatccagtaggacgtgcacgcaaggagccagagcctctagagaaaccaaatcgt
ccagacacatccttctcctggtttatgaatcctttcaaatgcttctttcacttgatctgg
gggaactacaagaaatacatcattggtggactggtgctgttgatcgtggccttattcctg
gttcttgtcttctacaccctaccaggggcaattagtagtaagatagtcaatgggtaa
DBGET
integrated database retrieval system