KEGG   Labeo rohita (rohu): 127170637
Entry
127170637         CDS       T09007                                 
Symbol
parp4
Name
(RefSeq) LOW QUALITY PROTEIN: protein mono-ADP-ribosyltransferase PARP4
  KO
K10798  protein mono-ADP-ribosyltransferase 3/4 [EC:2.4.2.-]
Organism
lroh  Labeo rohita (rohu)
Pathway
lroh03410  Base excision repair
lroh04210  Apoptosis
Brite
KEGG Orthology (KO) [BR:lroh00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    127170637 (parp4)
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    127170637 (parp4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lroh03400]
    127170637 (parp4)
DNA repair and recombination proteins [BR:lroh03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     127170637 (parp4)
SSDB
Motif
Pfam: VIT PARP4_MVP-ID PARP VWA_3 VIT_2 WGR-like_PARP4 VWA BRCT BRCT_2 VWA_2 DUF6473 VWA_CoxE
Other DBs
NCBI-GeneID: 127170637
NCBI-ProteinID: XP_050974723
LinkDB
Position
9:13785248..13796897
AA seq 1745 aa
MTVFENCNVVLDVKNVPFKEKNKLRLALQENGGNISYVINKQCSFVVTSSVNDLSSNRQR
SIQKLQIPVVETQYVWSCLDQGHLLPLTEHNLATELPYSSSEFLPPTEIKVSTHKLGKEM
FKVHSELPKTEVEILEKGGPRPGRFRVYKEGDHDLPEFPSYFQVAKYSIFERVKPKTLSV
LELQSAKGRSGQQYRVLCSVLREAETAVVQDKLVFCVTSEDAVEAYLQLMKEMETEGFAK
THTLPPEVERLASYSLQQLLLEEKLNCSTLSQEVGVFIELVWTEALGSLNNILTVPVSSI
SLNDVSRVEGLLLQTQKTEKEDEVKALLEEVNTLLPLRMIDPPSKNKLVSQKLDLCQLIR
DIINVSEATLGSPSPSSLGKYRALRCSIEVVPPQNPEFHFVSQLLQDRPVQIQEILRVSR
GVELQLFREDLGNIKPLLHSTSPSSLVGILSRGLLLPRVGVEQHGIERTDIGNLGGGIYF
SDSLKTSVKYSKPSATDGSRLLLVCEVALGRCKDLLKKDTTLTCAPAGYHSVHGVQRTPN
RLSEFEDDEFVVYNTEQIRLKYVVQYSLEGDELKEFHPHINTQLTQITDTTPDVLSSDDS
DDLESTKNPLEEMNAGLLDSSGQKLPLQAVNVRCKLMDLLCQVIIFQTYTNQSAVPIEAK
YVFPLEETAAVCGFEAFINGKHVIGKVKEKEQARKEYKQAIEKGHGAYLMDQDAPDVFTI
SVGNLPPGATVLIKVTFITELVVRSGSIVFSLSGSVAPWQQRAALNQTTQATVEKIGVTE
LQSEGEFSLSMSIEMPYEIINLSSSHRIKTKRTDCKAVISTLPGQTLGSEGLQVSFSLSN
IHIPRMWVENHPDKDSQACMLVFYPDFKSSGVSSSGGPSSVSDVVILLDSSKSMQGDAML
NARRIALQVLKSLDRSLKINIISFSTDFKEAFPAPLPLEEASEAARKFIMSCSGSGGSTD
LWRPLRILSLLPPCRGVRNILLLSDGHIQNQPLTLQLVQENSCHTRLFTCGLSLTANRHM
LRALAQAGGGTYEFFDTKMKHTWTEKVRAQVQRMESPGCRSVAVKWQRFNPTAPPPVQAP
SQLHALFSDCHTLVYGFVPHCTQATLFGDLSGQEIKTMVSTTELQKTKGTLLHKLTARAI
IRDYEDGILGSSEAEHEGKKAELKSYIIELSKEFSILSQFTSFVAIEEREQNEHDSGFTD
IPKIISEEDVDILPYIVWTEEKLMTADIIGAEDDYVWMESDPWSRFRSTSPELLGSCNMA
CLSSDDSEDDYGSIDEFIEQASAARPSYLSSSSSWRPSCLNGGINAVRGSMKEMSSGFRP
GLASRIYAPKAVFRTKGSWGAPLKARFPLSSLDGASISDMHPPPATAVMSACSDLPCMES
LPSEYSFDSQMDMTPVRASKKSASHPHHYYGLSNWGSVKHVSDTPMSRIGSRSQRRPAPP
SPSLFSYEPPCSYRQFHELLEVRDIGLNSLTEMSATEFAAELHASTPPVCADPPRPHHLA
SQQFMSMTPSPAPPPGFSRKMGASFSRRARAPASIVFDQPEKLAPPSPPQSGGFGGFFQR
NISAPGAKRKGQQKQFLKGRKQISKPDTVAWNELFELQHEDGYWECTDRLSSFLNLDVDF
FANVFLKEKGIRSFGVKAHADILRLLATLLVLQLIRVKKLEVGRLLESLLRLKESQEPRP
MYWEAVKRAVDWACRTDKQYPCVCSRLEIGWDWESSTRQLLGCDSPHPYSSLKPVLERRI
GVSVM
NT seq 5238 nt   +upstreamnt  +downstreamnt
atgacagtatttgaaaactgtaatgtggtgttagatgtgaaaaatgtgccttttaaagag
aagaataagctgagactagctctgcaggagaatggaggaaacatctcatatgtcattaac
aaacagtgctcttttgtagtgactagcagtgtgaatgatctgagcagtaaccggcagcgc
agcatccagaagctccagatcccagtggtcgagacgcagtatgtgtggagctgtctggac
caagggcatctcctgcctttgacggagcataatttggccacagagctgccatatagcagc
tctgaattcctccctcctacagagataaaagtgtcgacacacaaactaggaaaagagatg
ttcaaagttcactctgaactcccaaagactgaggttgagattcttgagaagggtggaccc
cgtcctggcaggttcagagtttacaaagaaggcgaccatgacctgcctgaatttccttca
tattttcaagtggccaagtattcgatttttgagagggtcaaacccaagactttgtctgtt
ttggagctgcagagtgccaaaggacgatcaggccagcagtatcgtgtgttgtgttcagtc
ttgcgtgaagctgagactgcagtggttcaggacaagcttgtgttctgtgtgacgtctgaa
gatgctgtggaagcgtatctgcagctgatgaaggagatggagacagaaggattcgcaaag
acacacacacttccacctgaggttgaacgcttggcatcctatagtctgcagcagctgctg
ttggaggagaagctgaactgcagcacattatcacaggaagttggtgtcttcatagagctg
gtttggactgaagctctcggttcccttaacaacatcctgacagtccccgtctccagcatc
agcctcaatgatgtgagcagggtggagggattgttactgcagacacaaaagactgagaaa
gaggatgaagtcaaagccctgctggaggaggtcaacactcttctacccctcagaatgatc
gaccctccttccaaaaacaagctggtgtctcagaaactagacctttgtcagctgatcaga
gatattataaatgtcagtgaggccactctgggaagcccctcgccctcgtctctgggaaag
tatcgagctctgaggtgcagcattgaggttgttccaccacaaaaccctgagtttcatttt
gtctctcagctgcttcaggacaggcctgttcagattcaggagatcctgcgtgtcagcaga
ggggtggagcttcagttgtttagggaggatttaggcaacattaaacccctcctccactcc
actagtcccagcagtttagtgggaatactgtcacgaggtctgctgctgcccagggttgga
gtcgaacagcatggaattgagaggacggatattgggaatcttggaggaggaatctacttc
agtgactctctgaagactagtgtgaaatactccaagcccagtgcaactgacggctctcgg
ctgctgttggtgtgtgaagtggcgttgggtcggtgtaaggacctgctgaagaaagacacc
actttgacttgtgcgcctgctggctaccacagtgtacacggagtccaacgcactcccaac
agactctctgaatttgaggatgatgagtttgtcgtctataacacagagcagatcagactg
aagtatgtggttcagtacagtctggagggggacgagttaaaagagtttcatcctcatatt
aacactcagctcacacagatcactgacacaacgcctgatgtcttgtccagtgatgacagt
gatgatttggagtccactaagaatcctctggaggagatgaacgcaggtttgctggacagc
agtggtcagaaacttcctctacaggctgtcaatgtgaggtgcaaactgatggacctgctg
tgtcaggtcatcattttccagacctacacaaaccagagtgctgttcccattgaagcaaag
tatgtctttccgctggaggagacggcagcagtgtgtggatttgaagcctttatcaatgga
aaacacgtcattggaaaggtaaaggaaaaagagcaggctcgtaaggagtacaagcaagcc
atagagaaaggtcatggagcctacctgatggaccaggatgcacctgatgtatttactatc
agcgtggggaatcttcctcctggagccacagttttgatcaaggtgacgttcatcactgag
ctggtggtcagatcaggctctatagtcttctcactgtctggcagcgtggcaccatggcaa
cagagagccgcccttaatcagacaactcaggcaactgttgaaaagattggtgtgacggag
cttcagtcagagggggagttttctctgtctatgtccattgaaatgccttatgagatcatc
aacttgagctcttcacaccgcatcaaaaccaagaggacagactgtaaggcagtgatcagc
acattgccgggacagactctgggatctgaagggttacaggtgtccttcagtctttctaat
atccacatacccaggatgtgggttgagaaccatccagataaagatagtcaggcctgcatg
ctggtgttttatccagactttaagtcaagtggggtgtccagctctggaggtccgtccagt
gtgagcgatgtggtcattcttctggactcctccaagtccatgcagggagacgccatgctg
aacgcccgcaggattgcccttcaagtcctcaaatctctggaccgctcactgaagatcaac
atcatctctttcagcactgatttcaaggaagcttttcctgcaccactgccattagaggag
gcatctgaagcagccagaaaatttattatgtcgtgtagcggctctggtggcagcactgat
ctgtggcggcctctccggatcctgagtctgctgcctccctgtcggggtgtgaggaacatc
ctgctgctctctgatggacatattcagaaccagcctctgaccctacagctggtccaggaa
aactcctgccacacacgcctcttcacctgcggactcagcttgacagctaatcgtcatatg
ctcagagctttggctcaggcaggtggaggaacatatgaattttttgacacaaagatgaaa
cacacttggacagagaaggtgcgcgctcaggttcagcgtatggagtctccaggctgcaga
tcagtggcagtgaagtggcagcggtttaatcccacagcgccccctcctgttcaagccccc
tcacagcttcacgctctcttcagtgactgtcacactctcgtatacggctttgtgccacac
tgcactcaggccacactgtttggtgatttgagtggacaagagatcaaaacaatggtttcc
accacagaactacaaaagacaaagggaactctccttcacaagttaacagcaagagcgatc
atcagagactatgaagatggcattctaggcagcagtgaggcagaacacgaggggaagaaa
gcagagctgaagtcctacatcattgagctcagtaaagagttctccatcttgtcccagttc
acaagttttgtcgccattgaagagagggagcagaatgaacatgactctggattcacagat
attcctaaaatcatatcagaggaggatgtggatattttgccatatatagtttggactgaa
gagaagctgatgactgcggatattattggtgctgaggatgattatgtatggatggaatct
gatccatggagcagattccgctccacatctcctgaactcctgggttcttgtaatatggcc
tgtttaagtagtgatgattcagaggatgactatggaagtattgatgagtttatagaacaa
gcatctgcagctcgcccttcttatcttagctccagtagctcctggcgtccttcatgtctt
aatggtggcattaatgctgtcagaggctctatgaaagaaatgagttcagggtttcgccct
ggccttgcctctaggatttatgcaccaaaggctgttttcagaactaaaggcagttggggc
gcaccattgaaagctcgtttccctctttcctctcttgatggtgcctccataagtgacatg
catccccctccagctaccgccgtaatgtctgcttgcagtgatcttccatgcatggaatct
ctcccctcagaatacagctttgattcccagatggacatgactcccgtacgtgcctccaag
aaaagtgcttcccatcctcatcattattatggtctctcaaattggggctcagtgaaacat
gtctctgatactccgatgtccagaattggctctaggagccaaaggcgtcccgctccccct
tccccatcgcttttctcctatgaacctccttgctcttatcgtcagtttcatgaattattg
gaagtcagagatattggccttaattcccttacagaaatgtctgccacagagtttgctgct
gagcttcatgcttcaactcctcctgtctgtgcagatcctcctcgtcctcatcatctcgct
tctcagcaattcatgtccatgactcccagccctgctccccctcctggtttttctcgcaag
atgggcgcatctttttccaggagggccagggctcctgcctccattgtctttgatcaaccc
gaaaagttagcaccaccctctcccccacaatctggtggctttggtggttttttccaacgt
aatatatcagctcctggagcaaagcgaaagggacagcaaaaacaattcctaaaagggaga
aaacaaataagcaaaccagacacagtggcctggaatgagctgtttgaacttcagcatgag
gatggatactgggagtgcactgacaggctgagcagcttcctcaacctggatgtagacttt
tttgccaatgtcttccttaaggagaaaggcatccgttcctttggtgtgaaggctcatgct
gacattttgaggcttttggcgactctgctggtgctgcagctgatccgggtgaagaagctg
gaagtgggacggctgctcgagtctctcctccgactaaaagagtcccaggagcccagaccg
atgtactgggaggcagtgaaaagggctgtggactgggcctgtcggacagacaaacagtat
ccgtgtgtgtgcagcaggctggagatcggctgggattgggaatcatctacacgtcaacta
ctgggctgtgattctccacacccatattcctcactcaaacctgttctggagagacgtatt
ggtgtttcagtcatgtag

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