Labeo rohita (rohu): 127170657
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Entry
127170657 CDS
T09007
Symbol
tbc1d4
Name
(RefSeq) TBC1 domain family member 4 isoform X1
KO
K17902
TBC1 domain family member 4
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
127170657 (tbc1d4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lroh04131
]
127170657 (tbc1d4)
Membrane trafficking [BR:
lroh04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
127170657 (tbc1d4)
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
127170657 (tbc1d4)
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
127170657 (tbc1d4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
TBC1D_hel
DUF3350
PID
DUF4600
IRS
Motif
Other DBs
NCBI-GeneID:
127170657
NCBI-ProteinID:
XP_050974755
LinkDB
All DBs
Position
9:20749710..20790305
Genome browser
AA seq
1247 aa
AA seq
DB search
MEGQDGKGNNDSNQKTDKRFALWYMGWSSLDRRTTLPMLPWLLAEIRRKSEKNESGPAQA
REVQLYLSPPLIRCVPANSSNPSVFIFEHKAQFISRFIHNSHDLSYFAYLIRSQPDNPES
EMACHVFKACDPNQVPEVISSIRQVSKVALKEESKPKQDSDESFYNSQKFEVLYCGKVTV
SHKKAPSTLIDDCIDKFRQHEIERKRLRLLNGQRSSTEAPVEFIMGEDPLSASLCEVDEP
EPNVTEEELSEVGNWNLDLSSSCSTGSLRGAFPECILEDSGFGEQQEIRTRCNSLAGGLQ
KRSRETGKGSTRRRHASAPNNVQPSDADKNRTMLFQVGRFEVNLISPDTKSVVLEKNFKD
ISSCSQGVKQTDHFGFICRDVVESGPAQYVCYVFQCASESLVDEVMLTLKQAFTTAAALQ
SSKNQIKLCEACPMHDLHKLCERIEGLYPPRAKLAIQKYLSQLSDNEQVNIFERVQKMKP
VSDHEENELVILHLRQLCETKQKSHVHIGEVPQQNASGSTVTSDNSSAGRNKLDVLKNKA
RSSLTSSLENIFSRGANRMRMRLGSMGSFDRQGDSPGDSPPGTPPSYVEDDPDAPQFRRR
AHTFSHPPIKKKISFTEVSSQASKAPLRRQQSLAPELLQNSNVGFSRVRSVSESESYFSL
SSSFHTPTFLKTFYQGSLGSLASLSDNGSLKSGNGEGRKRSLSGCSTDSLTLVPPRRVSW
RQKIFLRVASPMNKPSASMQNMDNMDGRELLPLSPRALNLDQDPQVSPLSPEQGFGGEKG
RHSPADYRALWKKAIHQQILLIRMEKENQRLEASRDELHIRKMKLDYQEVCQCSKEVQAL
WDRKLSSPCRTKVQWDKEEIHSAVCQGVPKSRRGEVWLLLSQQYRLRHRLPQRQQPPETP
YQDLLKQLTAQQHAILVDLGRTFPTHQYFSTQLGAGQLSLYNLLKAYSLLDTEVGYCQGI
SFVAGLLLLHMSEEQAFDTLKFLMYDLGIRRQYRPDMISLQIQMYQLSRLLHDYHRNLYT
HLEEHEICPSLYAAPWFLTLFASQFPLGFVARIFDLLFVQGTEVIFKVALCLLSSHEGEI
LECEGFESIVDYLKSTIPTLTHSQMEETITKATEMDISKQLHAYEVEYHVLQDELSDAPP
PSEDSDRLDKLEKANAQLKKQNMDLLEKLQAARLKIQTLESSVESFLSRESKMKHLIRSL
EQEKASYQKTIERMRSSLPSDAVADVEMTQLKSSTNGKAKETACKKP
NT seq
3744 nt
NT seq
+upstream
nt +downstream
nt
atggagggacaggatggcaaagggaataatgacagtaatcaaaagacagacaagagattt
gcactctggtacatgggctggtcttctctggacaggcggaccacgctgcctatgctaccc
tggctcttggcggagatccggaggaaaagtgagaagaacgagtctggtcccgcacaggcc
agagaagttcagctgtatctctcgcccccactgattcgctgcgtgcccgcaaacagcagc
aacccgtccgtgttcatattcgagcacaaagcacagtttatatccaggtttatccacaac
agccatgatttgtcttattttgcctaccttatcagaagtcaacccgataacccagagtct
gagatggcatgccatgtgttcaaagcatgtgatccaaaccaggtgcctgaggttattagc
agcattagacaggtgtccaaggttgctcttaaggaggaaagcaagcccaagcaagacagt
gatgagtctttttacaactcccagaaattcgaagtactttactgtggaaaagtgacagtc
agtcacaagaaagccccatcaactttgatcgacgactgcattgacaaattccgccaacat
gagattgaacgcaaacgtctgcggctcctcaatggccagcgcagctctaccgaggccccc
gtggagttcattatgggtgaagaccctctaagcgcctccctctgtgaagtcgacgaaccc
gagcctaacgtgactgaggaagaactgtctgaggtgggcaattggaatctggacttgtct
agctcctgcagcacgggcagtctacgaggggcctttcctgaatgtatcttggaggactcg
ggtttcggggagcagcaggagattcgtacacgctgtaatagcttggcgggtggcctgcag
aaaagatcgagagagacgggcaaggggtcgacacgtaggagacacgctagcgcgcccaat
aacgtgcagccttctgatgcggacaagaatcgcacaatgctgttccaggttggccgtttt
gaagtgaatctcatcagccctgacaccaaatctgtggttctggagaagaattttaaggac
atctcgtcctgttcacagggtgttaaacaaacagatcactttggctttatttgtcgggat
gtggtggagtctggcccagcccagtatgtgtgttacgtgttccagtgtgctagcgagtct
ctggtggatgaagtaatgctcaccctgaaacaagcctttaccacagcagcagctctgcag
agctccaagaaccaaatcaaactgtgtgaggcttgtccaatgcatgacttgcacaagctc
tgtgagagaatagaaggcttgtatcctcccagggcgaaactagccattcagaagtacctg
tcacagctgagtgacaacgagcaggtcaatatattcgaacgggtccagaaaatgaagccg
gtatccgatcatgaagaaaacgagcttgtgattcttcacctccgacagctgtgcgagacc
aaacagaagtctcatgttcatattggagaggtcccacagcagaatgcttctggcagcacc
gtgacctctgataactccagtgcgggccgtaataaactggacgtgttgaagaacaaagcc
cggagttctctgacaagctctctggaaaatatcttctcacggggtgccaaccgtatgcga
atgcgtctcggcagcatgggaagttttgaccgccagggtgactcccctggtgactcccca
cctgggaccccacccagttacgttgaggacgatccagatgccccgcagtttcgtcgccgg
gcacacacctttagccacccacccatcaagaagaaaatctccttcactgaggtttcctcc
caggcgtctaaagcgccgctgcgccgacaacagtctttggccccagagctgctgcagaac
agcaacgttggtttctcgagagtgcgcagtgtctctgagagcgagtcctacttcagtctc
tcatcctccttccacacccccactttcctgaaaaccttttaccagggctccctcggctca
ctggcctccctgtcggacaacgggagtctaaagagtggtaatggagagggcaggaagagg
tctctgtccggctgtagcaccgattctttgaccttggtgcctccacgcagagtttcttgg
cgccagaagattttcctaagggtggcgtcacccatgaacaaaccctcggcttctatgcaa
aacatggacaacatggatggccgggagctcctgccactttctcctcgggctttgaacctg
gatcaggaccctcaggtgagccctctgtccccagagcagggctttggtggagagaagggc
cggcacagcccagctgactacagggccctgtggaagaaagccatccaccaacagatttta
ctcatccgcatggagaaagaaaaccagcgcctggaggccagccgtgatgaattgcacatt
cgtaaaatgaagctggactaccaggaagtgtgtcagtgctcaaaagaggtgcaggccctt
tgggacaggaaattgagcagtccctgtcgcactaaagtacagtgggacaaagaagagatt
cacagtgctgtctgccaaggcgtccccaaaagtcggcgaggtgaagtgtggcttcttctc
tcccagcagtatcgtttgcgtcaccgtctgccgcagcggcagcaaccccctgaaacacct
tatcaagatctcctcaaacagctcacggcacagcaacacgccatcctggtcgacctcggc
cgcacattcccaacacaccagtatttcagcactcagctgggagctggacagctatctttg
tacaatctcctgaaggcctactccctgctggacacggaggtgggctactgccaggggatc
agttttgtggccggtttgctgctgttgcatatgagcgaggaacaggctttcgacacgctc
aagtttctcatgtacgacctgggcattcgccgacagtaccgtcccgacatgatctctctg
cagatccagatgtaccagctgtcccgactgttgcacgactatcatcgtaacctgtacact
cacctggaggagcacgagatctgtcccagcctgtacgccgcgccctggtttctcaccctc
ttcgcctctcagttcccgctcggcttcgttgcccgtatatttgacctcctgtttgtccaa
ggcacagaggtgatttttaaggtggccctgtgtttgctgagcagccacgagggagagata
ctggagtgtgagggctttgaaagcatcgtggactaccttaaatccaccatccctactctc
actcacagccaaatggaagagacaatcactaaggcaactgagatggacatctccaagcag
ctgcacgcgtatgaagtggagtaccacgtcctgcaggatgagctgtcagatgctcctcca
ccatcagaggactctgataggctagataaactggagaaagctaatgcccagctcaagaaa
cagaacatggacttgctagagaaactgcaggcggctcgtttgaagattcagacattggag
agcagcgtggagagcttcctgtcacgcgagagcaagatgaagcacctgatccgttctctg
gaacaggagaaagcttcctaccaaaagaccatcgagcgcatgcgtagcagtttgccatca
gatgccgtggctgatgtggagatgacccaactcaaatccagcaccaacgggaaagccaaa
gaaactgcctgcaaaaagccttga
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integrated database retrieval system
