Labeo rohita (rohu): 127170701
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Entry
127170701 CDS
T09007
Symbol
itgb2
Name
(RefSeq) LOW QUALITY PROTEIN: integrin beta-2
KO
K06464
integrin beta 2
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04145
Phagosome
lroh04514
Cell adhesion molecule (CAM) interaction
lroh04517
IgSF CAM signaling
lroh04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
127170701 (itgb2)
04517 IgSF CAM signaling
127170701 (itgb2)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
127170701 (itgb2)
09142 Cell motility
04810 Regulation of actin cytoskeleton
127170701 (itgb2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lroh04131
]
127170701 (itgb2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lroh04147
]
127170701 (itgb2)
04515 Cell adhesion molecules [BR:
lroh04515
]
127170701 (itgb2)
04090 CD molecules [BR:
lroh04090
]
127170701 (itgb2)
Membrane trafficking [BR:
lroh04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
127170701 (itgb2)
Exosome [BR:
lroh04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
127170701 (itgb2)
Cell adhesion molecules [BR:
lroh04515
]
Integrins
Integrin beta subunits
127170701 (itgb2)
CD molecules [BR:
lroh04090
]
Proteins
127170701 (itgb2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_B_tail
Integrin_b_cyt
PSI_integrin
EGF_integrin
EGF_TEN
EGF_2
EGF_Teneurin
vWA_SIBA-E
I-EGF_1
Motif
Other DBs
NCBI-GeneID:
127170701
NCBI-ProteinID:
XP_050974835
LinkDB
All DBs
Position
9:complement(29960946..29976181)
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AA seq
767 aa
AA seq
DB search
MLQAVCLRGLLLLLVGRQVYTEEQCLKASINTCGECIRSGSGCAWCKDLNFTKTGEQEAV
RCDTVASLQKRGCSHNFIINPKNDFFKSFKQASDCWYKPVQIQPQEISLNLRPGMPYIFD
LHFKRAEGYPVDLYYLMDLSYSMKDDLENVKKLGNNLLSELTKITGNARIGFGSFVDKTL
LPYTDTNEAKLQRPCADKNEPCQPAFGFQHVLSLTTDGNKFKNMVAQQHISGNLDPPEGS
LDAIMQVAVCVNDIGWGNSTRLLVLATDDGFHMAGDGKLAAILEPNQETCQLVNNKYSKS
NIWDYPSVGQIARKLEEQNIQPIFAVTKKMETVYTELSKLIPKSAVGVLSEDSSNVVNLI
VDAYNNLTSEVIMAHDALPDFVSVKYTSNCEGGQKPSDRGKCDNVNIGKEVIFRVTVTVE
KCIESQSFLIGPLGFNEKLKVNVATRCECECDDKKELHPHCGGNGKVVCGGCRCNPGFLG
QRCECKLGQKDEASLKAQCRKDNGTECEGKGDCLCGRCQCHNTDSGGNFYGEFCECDDEH
CEKNNNQQCAGHGKCKCGKCDCDQGYEGSACQCAKSDEACKIENTVCYNRGKCVCNHCNC
ERGYKGPYCKTCPNCQRPCDNSGSCVECLAFGTGPFEKNCTETCKHLTVKVEQNLIKKDC
RVKDKEGCWMTFTMTEQPGFDTYSVTVLKDRECPEGPNIAAIVGGSLAAVALIGLLILLI
VKGVLYASDLREWRRFEKDRKHEKSCGTNPLFQNATTTVQNPTFSGD
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atgcttcaggcagtgtgtctgaggggccttctcctgttattggtgggaagacaagtctac
actgaggaacaatgtttaaaagcttcaataaacacgtgtggagaatgcatcagatccggg
tctggctgtgcctggtgtaaagatttgaatttcaccaagaccggggagcaggaagcagta
cgttgtgacacagttgcttcgcttcagaaacgaggatgttcacacaatttcataataaat
cctaaaaatgatttttttaaaagtttcaaacaagcctctgactgctggtacaaaccagtg
caaatccaaccacaagaaataagtctgaatcttagaccagggatgccctacatttttgat
ctacattttaaaagggcagaaggctatccagtagatctctactacctaatggatctctca
tactccatgaaagatgatttggaaaatgtaaaaaaactgggaaataatttactttctgag
ctcactaaaatcaccggcaatgccaggataggctttggttcgtttgtcgacaaaacgctt
cttccatacaccgacaccaatgaagcgaagctccaacggccgtgcgcagataaaaatgaa
ccgtgtcagccagcatttggctttcagcatgtgctttcactgacaacagatgggaacaag
ttcaaaaatatggtagcccagcagcatatatcaggaaacctagaccctccagagggaagc
ctggatgccatcatgcaagtcgcagtctgcgtgaatgatattggttggggaaacagcact
cggttgctggtgttggccactgatgatggcttccacatggcaggggatggaaaacttgct
gccattctggaaccaaaccaagaaacctgtcagctggtcaacaacaaatacagcaagagc
aacatctgggattacccatctgttggacaaattgctcgcaagctggaggagcaaaacatt
caaccaatttttgcagtcaccaaaaaaatggaaaccgtgtacacagagctgagcaaactg
attcctaaatctgcagtaggagtgctctctgaagactcgagcaacgttgtcaatctaatt
gtggatgcatacaataacttgacctctgaagtgatcatggctcatgacgccctcccagac
tttgtatctgtgaaatacacgtcaaattgtgaaggtggacaaaaacccagtgacaggggg
aaatgtgataatgtgaacattggtaaggaggtgatttttagggtgacagtaacagtagag
aaatgcattgagagtcagagcttcctcatcgggccactgggctttaatgaaaagctgaag
gtgaacgttgcgactcgatgcgagtgtgaatgtgatgataaaaaagagcttcatcctcac
tgtggggggaacggtaaagttgtctgtggtggctgcaggtgtaatccgggattcttagga
cagcgatgtgagtgcaaactaggccaaaaggacgaggcgtcattgaaagcgcagtgccgg
aaggacaacgggaccgaatgcgaaggcaaaggagactgtctgtgcggacgttgtcagtgc
cataatacggatagcggtggcaatttctatggcgaattctgtgaatgcgacgacgagcac
tgtgaaaaaaataacaatcaacagtgtgcaggtcatggcaaatgcaaatgtggtaaatgt
gactgtgatcaaggctatgagggctcagcgtgtcaatgcgcaaaatccgatgaggcttgc
aagatcgaaaatactgtttgttataaccgtgggaaatgcgtgtgtaaccactgtaattgt
gagagaggatacaaggggccctactgcaaaacgtgtcctaattgccaacgtccgtgtgat
aattccgggagttgtgttgaatgtttggcctttgggaccggtccgtttgagaagaactgc
actgaaacctgtaaacatctgacggttaaggtggaacaaaacttgatcaagaaagattgt
cgagtcaaagataaagagggctgctggatgacatttacaatgacggaacagcctggattt
gacacatactctgtcactgtcctcaaagacagagaatgtcctgaggggccaaacatagca
gccatcgtaggaggatctctagcagctgtggcgttgattggtctcctgatcctcctcatt
gtcaagggagttctgtatgcaagcgaccttagagaatggaggagatttgaaaaagacaga
aaacatgaaaaatcatgtggtaccaacccattattccagaatgctacaaccacagttcaa
aacccaacattttctggagattag
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