Labeo rohita (rohu): 127170731
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Entry
127170731 CDS
T09007
Symbol
itga6a
Name
(RefSeq) integrin alpha-6 isoform X1
KO
K06485
integrin alpha 6
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04510
Focal adhesion
lroh04512
ECM-receptor interaction
lroh04514
Cell adhesion molecules
lroh04810
Regulation of actin cytoskeleton
lroh04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
127170731 (itga6a)
04514 Cell adhesion molecules
127170731 (itga6a)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
127170731 (itga6a)
09142 Cell motility
04820 Cytoskeleton in muscle cells
127170731 (itga6a)
04810 Regulation of actin cytoskeleton
127170731 (itga6a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lroh04147
]
127170731 (itga6a)
04515 Cell adhesion molecules [BR:
lroh04515
]
127170731 (itga6a)
04090 CD molecules [BR:
lroh04090
]
127170731 (itga6a)
Exosome [BR:
lroh04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
127170731 (itga6a)
Exosomal proteins of breast milk
127170731 (itga6a)
Cell adhesion molecules [BR:
lroh04515
]
Integrins
Integrin alpha subunits
127170731 (itga6a)
CD molecules [BR:
lroh04090
]
Proteins
127170731 (itga6a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP
FG-GAP_3
Trypco2
Integrin_alpha
Motif
Other DBs
NCBI-GeneID:
127170731
NCBI-ProteinID:
XP_050974894
LinkDB
All DBs
Position
9:complement(2238943..2269568)
Genome browser
AA seq
1092 aa
AA seq
DB search
MELFEQGLSLNLCIFSLLLWTSTSAFNLDTQNVLRKNGQPGSLFGFSLALHRQLQPYDKR
ILLIGAPKARALSNQGANITGGLYSCDITSHPDDCTRVDFDNDVDARVENKENQWMGVTV
QSQGPGGKIVTCAHRYQRLLFPNSPQEARDITGRCYMLSQDLSIDSQSDEDGGNWKFCDG
RTRGHERFGACQQGLAATFTKDYHYVVFGAPGAYNWKGIVRVEQKNNTLLEMGFFDDGPY
EVGDENRLDPNLVPVPANSYLGFSLDSGHSITEKGKLIIVSGAPRANHSGAVVFLRKEGE
MSTMLTPEHVLEGPGLASSFGYDVAVVDLNGDGWQDVVVGAPQFFQRDEEVGGAVYVYIN
RAGRWKDVIPTRLNGTKDSMFGLAVENIGDINLDSFEDIAVGAPYADSGFGSVYIYHGSA
DGINTTPAQILEGKQHNIKMFGYSLAGNMDLDHNSYPDLAVGSLSDTVFIYRSKTVISIK
KDIKVTPKEIDLMKKTCGNSVCLTVEACFSYKANPSTYNPKLSISCTLEAEWYRRKLGLP
SRVVFLDKTTNDQDFQSTGTLELRGQNKKACYKAKLKLQEGIRDKLRAIPIEVSVAIQSA
KRGKRQSSLPQLTPILDSTVPNKTITEVNFLKEGCGTDNICQSNLHLQYRFCYRESKQDV
FPPLPLEKGVPVISLSDQKDIALEVTVRNKNGDDAHEAKLVGHFDESLSYSGFRSPKNSD
KHVICAANQNGSLADCELGNPFKRDSEVTFYIILSTGKISLDTKEVEIDLQLETTSSQEG
LGKVKAKAKVVIELLLSVQGVAKPSQVYFGGEVRGMSAMKRGEEVGSLVEYEFRVINLGK
PLKSFGTASLNIQWPKESSVGKWLLYLMKINTKDLQLVTCSPEKEINPLRLSEESTSRKK
RELEERKPSEGSKTSLFPDKRKHKILSCSGDARCVEIKCPLQGLDSTAVIILKSRLWNST
FLEDYASYNYLDIIVKASISLDVSAKNIVLKNPETQVRLTVFPETTVTPFGGVPWWIILV
AVLAGILMLALLVLLLWKCGFFKRSKYEDSVPKYHAVRIRKETRLLKDGKDMLDPLEKKQ
WMTTWNENESYS
NT seq
3279 nt
NT seq
+upstream
nt +downstream
nt
atggagctctttgagcaggggctctctctgaacctgtgcattttttcgttgctgttatgg
acttctacaagtgcatttaacctggacacgcaaaacgtccttaggaagaatggtcaaccg
ggcagcctctttggattctctctcgccttgcaccggcagctccagccttatgataaaaga
atattgttgatcggtgctcctaaagccagggctttgtccaatcagggagcaaacatcaca
ggtgggctgtacagctgtgacatcaccagccatcctgatgactgcactcgagtggacttt
gacaatgatgttgatgctcgtgtggagaataaggagaaccagtggatgggtgtaactgtt
caaagtcaaggacctggaggcaagattgtgacatgtgcccatcgataccagcgtctgttg
ttccccaactcaccgcaagaggcacgtgatatcacgggacgctgctatatgctcagtcag
gacctgagcatcgacagccaatcagatgaggatggggggaactggaaattctgtgatggc
cgcaccaggggtcatgaaagattcggggcctgtcagcagggcttggctgccaccttcact
aaagattaccattatgtcgtctttggggcaccaggggcgtacaactggaaaggtatagtg
cgtgtcgagcagaagaacaacactctgctggaaatgggcttttttgatgatggtccttat
gaggttggggatgaaaaccggctggatccaaatctagtgccagtacctgccaacagttac
ttaggattctctctagattccggccacagtattacagagaaaggcaaactcatcatagtg
tcaggagcaccgagagccaatcacagcggtgcagtggtgtttctgcggaaggaaggcgaa
atgtctaccatgctcacacctgaacatgttctggaaggaccaggacttgcatcctccttt
ggatatgatgtcgctgtggtggacctgaatggagatggttggcaggatgttgtggttggt
gcaccccagttcttccagagagatgaggaagttggtggagctgtgtatgtttacatcaat
agggctggaaggtggaaggacgtcattcctactcgcctaaatggaacgaaagactccatg
ttcggactggctgtggagaacattggagacatcaatctggattcgtttgaagatattgca
gtaggtgctccatacgcagactctgggtttggtagtgtctacatctaccacggatctgct
gacggcatcaataccacaccagctcagatactggaaggtaaacagcacaatattaaaatg
ttcggctattctctggctggaaacatggacctggatcataactcgtaccctgatctcgct
gtgggctcgctctctgacaccgtttttatatacaggtccaaaacagttattagcatcaag
aaagacatcaaggtgacaccaaaagagattgacttgatgaagaaaacatgtggcaacagt
gtttgcttgaccgtggaagcgtgtttctcttataaagcaaacccttccacctacaaccct
aaactctccatttcctgtacacttgaggcagagtggtaccgcagaaagctgggtcttcca
tctagggttgtgtttctggataagaccacgaacgatcaggacttccagtcgaccggcact
ctggagctacgaggacagaacaagaaagcctgttacaaggctaaactcaaattacaagaa
ggcattagggataaactcagagcaattcctatcgaggtgtctgtggccattcagagcgca
aagagaggcaagcggcagagttctctgccacaactaacgccaatactggactccactgtg
cccaacaagaccatcactgaggttaatttcctaaaggagggttgtggtacggacaacatc
tgtcagagtaatctacacctgcaatacagattctgctacagggagtccaaacaggatgtg
tttcctcctctaccactggagaagggtgtgccggtgatttctctgagtgatcaaaaggac
attgctctggaggtcacagtcaggaacaagaatggagatgatgctcatgaagcgaaattg
gtggggcattttgatgaatccctctcatattctggattcaggtctccaaaaaattctgat
aaacatgtgatctgtgctgccaatcagaatggctccctagcagactgtgagctgggaaat
ccttttaaaagagattcagaggtaacattctatatcatattgagcactggcaagatatca
ctcgacaccaaagaggttgagatcgaccttcagctggaaacaacgagttcacaggaaggc
ctgggcaaagtgaaggccaaagccaaagtagtgattgaactgcttctttctgtacaaggg
gttgccaaaccatctcaggtctattttggaggtgaagtaagaggcatgagcgccatgaag
agaggggaggaagtcggcagcttggttgaatatgaattcagagtgattaatttgggaaag
cctctgaagtcttttggaactgcatccctgaacatccagtggcctaaagaaagctctgtg
gggaaatggctgctgtatctgatgaagatcaacaccaaggacctgcagttagtcacctgt
tcacctgagaaagagataaacccactcagactgagcgaggagtctacatcaagaaaaaag
cgtgagctagaggagcgaaaaccatctgaggggagtaaaacatctcttttccctgacaag
cgcaagcacaagattctgtcgtgcagtggagatgccagatgtgtggagatcaaatgcccc
ctacagggcttggacagcactgcggtcatcattttaaaatcccgcctgtggaattccact
ttccttgaagattacgcgtcctacaattaccttgatataatagtgaaagcctccataagt
ctggatgtttctgccaagaacattgtccttaaaaatcctgagacccaggtgaggctgacc
gtgtttccggagacaacagtgactccgttcggaggcgtcccgtggtggatcattctggtg
gctgttttagctggaattctaatgctggctcttctagttctgttactctggaagtgtgga
tttttcaaacgctccaaatatgaggacagcgttccgaaatatcacgccgtgaggattcgt
aaggagacgcgtcttttgaaagatggaaaggacatgttagatcccttggagaagaagcaa
tggatgaccacatggaatgagaacgagagctactcatga
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integrated database retrieval system
