Labeo rohita (rohu): 127170785
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Entry
127170785 CDS
T09007
Symbol
hdac4
Name
(RefSeq) histone deacetylase 4 isoform X1
KO
K11406
histone deacetylase 4/5 [EC:
3.5.1.98
]
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
127170785 (hdac4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lroh03036
]
127170785 (hdac4)
Enzymes [BR:
lroh01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
127170785 (hdac4)
Chromosome and associated proteins [BR:
lroh03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
127170785 (hdac4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
HDAC4_Gln
Motif
Other DBs
NCBI-GeneID:
127170785
NCBI-ProteinID:
XP_050974992
LinkDB
All DBs
Position
9:complement(30542929..30839102)
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AA seq
1052 aa
AA seq
DB search
MSSHSRPDGLPTKEQPLELLKPSGLNHIPPVDVSAALPLQVPPSAIPMDLRVDHQFALAP
SDPAQREQQLQQELLALKQKQQIQRQLLIAEFQRQHEQLSRQHEAQLQEHVKHQQDLLAL
KHQQELLEHQRKLERHRQEQELEKQQREQKLQLLKNKERGQESAVASTEVKMRLQEFVLN
KKKALAQRSLNHCLPNDPRYWYGKTQHSSLDQSSPPQTGISTYNHPVLGMYDPKDDFPLR
KTASEPNLKLRSRLKQKVTERRSSPLLRRKDGPITTAKKRSLDMAESACSSAPGSGPSSP
NNSSNNITNENGIAGSISNSQVEPSLAHRLTGREGPVSQLSLYTSPSLPNITLGLPATGP
SSVASGQQDGDRMAVPGLQPGIPITTPFMPGAHLPSYLAASTLEREGGSAHNTLLQHMVL
LEQSAAQNSLVAGLGGVSMQSHPIHKLRQHRPLGRTQSAPLPQNAQALQQLVVQQQHQQF
LEKHKQQFQQQQLHISKMIAKPNEPGRQHESHPEETEEELREHQGLGDSTEGLPHGVTIK
QEPPDEQDEEFQQRERQAEEELLFRQQALLLEQQRIHQLRNYQASMEAAGLSVTFPGHRP
LSRAQSSPASATFPIVVQEPPAKPRFTTGLVYDTLMQKHQCMCGNSNIHPEHAGRIQSIW
SRLQETGLRGQCECIRGRKATLEELQTVHSEAHVLLYGTNPLRQKLDSSVTPMFVRLPCG
GIGVDSDTIWNEVHSSSAARLAVGSVVDLVFKVASGELRNGFAVVRPPGHHAEESTPMGF
CYFNSVAIAAKLLQQRLNVSKILIVDWDVHHGNGTQQAFYSDPNVLYVSLHRYDDGNFFP
GSGAPDEVGIGPGVGFNVNMAFTGGLEPPMGDADYLAAFRTVVMPIANEFAPDVVLVSSG
FDAVEGHAPPLGGYKLTAKCFGYLTKQLMGLAGGRLVLALEGGHDLTAICDASEACVSAL
LGNELDPIPDDVLQQRPNANAIHSMEKVLEIQSKYWRSLQRSASTLGYSLLEAQRCETEE
AETVTAMASLSVANKHMGKRTEEEPMEEEPPL
NT seq
3159 nt
NT seq
+upstream
nt +downstream
nt
atgagttcccacagccgcccagatggacttcccactaaagaacagccactggaacttctg
aagccatctggactcaaccacattcctcctgttgatgtgagcgcggcgctgccactgcaa
gtgccgccttctgccatccccatggacctgcgcgtggatcaccagttcgccctggcgccg
tcggacccggcccagcgcgagcagcagctgcagcaggagcttctggccctcaagcagaaa
cagcagatacagaggcagctcctgatcgccgagtttcagcggcagcacgagcagctctcg
cgccagcacgaagcgcagctgcaggagcatgtcaagcatcagcaagacctgctggccttg
aaacatcagcaggagctcctggaacaccagcggaagttggagcgccatcgtcaggaacag
gagctggagaaacagcagcgggaacagaagctccagttacttaaaaacaaagaacgcggc
caagagagcgctgtggcgagcactgaggtgaagatgaggttgcaggagtttgtcctcaac
aagaagaaagcgctggcacagagaagcctcaaccactgcctgccaaatgacccgcgctac
tggtacgggaaaacccagcacagctccctggaccagagctcaccgcctcagacagggatt
tccacttacaaccacccggtgctgggaatgtacgaccccaaagatgacttcccgctccgc
aagacagcatctgagcccaacctgaagctgcgatcgaggctgaagcagaaagttacggag
cgcaggagtagcccgttgcttcggaggaaggatgggccaatcaccactgcaaagaagcgc
tctctggacatggcagaatcggcatgcagcagtgctcctggttctggtccgagttcaccc
aacaacagctcaaacaacattacaaatgagaacggcatcgccggatcaatctccaacagt
caagtagagccatctttggcgcacagactcacgggcagagagggtcctgttagccagctg
tctctgtacacatcgccctcccttcccaacatcaccctgggcctgccagccaccggccct
tccagcgtggcatccggccagcaggatggtgacaggatggcagtgccaggcttgcagcca
ggaatacccataaccactccgttcatgccaggagcccacctgccttcttacctggccgcc
tccaccttagagcgggagggcggctcggcacacaacactctcctgcagcatatggtgctt
ctggagcagtcggccgcacagaactccctggtcgcaggcctggggggcgtgtccatgcag
tcccatcccatccacaagctccggcagcatcggcccctcggacgcacgcagtcggccccc
ctaccccagaacgcccaggcgctgcagcagctggtggttcaacagcaacaccagcagttc
ctggaaaaacacaagcaacagttccaacagcagcagcttcacatcagcaagatgattgct
aagccgaacgagcctggccgacagcacgagagccacccagaggagacggaggaggagcta
cgggagcaccaggggctgggcgactccacggagggtcttcctcacggagtcactatcaaa
caggaacctccggatgaacaggatgaagagttccagcagagagagaggcaagccgaggaa
gagctgctttttagacagcaagctctcttgttggagcaacagaggatccatcagttgagg
aactatcaggcgtctatggaggcggccgggctgtctgtgaccttcccaggccatcggccc
ctatccagagcacaatcgtccccggcctctgcgacctttcccattgttgtgcaagaacct
cctgccaaaccacgctttaccactggtctggtgtacgacaccctgatgcagaaacaccag
tgcatgtgtggaaacagcaacatccatcccgaacacgccgggcgcatccagagcatctgg
tcgcgactgcaggagacgggactgcgcggccagtgtgagtgtattcgaggcagaaaagcc
actctggaggagctacagactgtccactctgaggctcatgtgctgctttacggaaccaac
cctcttagacagaaactggacagctcagtgacacccatgttcgtgagactgccgtgcgga
ggaatcggggttgacagtgacactatctggaatgaagttcattcgtccagtgctgctcgt
ctggctgtgggatctgtagtggatttggtgtttaaagtggcttcaggagagctgaggaac
ggctttgctgtggtacgacctccaggacaccacgctgaggagagcactcccatgggattt
tgctatttcaactcggtcgccattgcagccaaactcctgcagcagagactcaacgtcagt
aagattctcattgttgactgggatgttcaccatggaaatgggactcaacaggccttctac
agtgaccctaatgtcctgtatgtgtctctccatcgctacgatgatgggaacttcttccct
ggcagtggagcccctgatgaggtgggcatcggtccaggcgtgggctttaatgtgaacatg
gccttcaccggaggtctggagccacccatgggggacgcagactatctggcggcattcagg
acggtggtgatgccaattgcgaacgagtttgctccagacgtggtgctggtttcttcaggc
ttcgacgctgtggaggggcatgcgccacctctgggaggatacaagctcacggccaaatgt
tttggctacctgaccaagcagctgatgggactggccggcggccggctggtgctcgcgctg
gaggggggtcacgacctcaccgccatttgcgatgcctccgaagcatgtgtttctgctttg
cttggaaacgagttggatcctattcctgatgacgtgctacaacagaggccgaacgccaac
gccattcactccatggagaaagttctggaaatccagagtaaatactggcgctcgctgcag
agatctgcctcgactctgggatactcactgctggaggcccagagatgtgaaactgaagag
gcagagacggtgaccgctatggcctccctgtctgtggccaacaagcacatgggaaaaagg
acagaggaggagcctatggaagaggaacctccattgtag
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integrated database retrieval system
