Labeo rohita (rohu): 127170876
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Entry
127170876 CDS
T09007
Symbol
tnfsf13b
Name
(RefSeq) tumor necrosis factor ligand superfamily member 13B isoform X1
KO
K05476
tumor necrosis factor ligand superfamily member 13B
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04060
Cytokine-cytokine receptor interaction
lroh04672
Intestinal immune network for IgA production
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
127170876 (tnfsf13b)
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
127170876 (tnfsf13b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
lroh04052
]
127170876 (tnfsf13b)
04090 CD molecules [BR:
lroh04090
]
127170876 (tnfsf13b)
Cytokines and neuropeptides [BR:
lroh04052
]
Cytokines
Tumor necrosis fators
127170876 (tnfsf13b)
CD molecules [BR:
lroh04090
]
Proteins
127170876 (tnfsf13b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNF
PFF1_TM
Motif
Other DBs
NCBI-GeneID:
127170876
NCBI-ProteinID:
XP_050975125
LinkDB
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Position
9:complement(8885629..8893825)
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AA seq
272 aa
AA seq
DB search
MPAEDVGPGRGERRRLPWLFLVLVIAAITSSSLSVISLYHVLALQAEVEGLRAEVVRKRE
EQSGKLEEPMSGAEKQTHEQEEEENKERIEYLQKTEMDDTVTEHTVLSKRSLGHTSNKAE
SQPCLQMMANNKKKTFQKEFALEICTAIPWQVGLKRGSALEEEQGTILVKEEGFFFIYSQ
LSFSQVYYTDSTFAMGHIVIRIKKNVVGDESQHVVLFRCIQSMNRVNHFNTCYTGGVVKL
DSGDRLELLIPRTHANISLDGDSTFLGAIKLA
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgcctgctgaagatgttggtccaggtcggggggaacggagaaggttaccctggctgttt
ctagtgctggtcattgctgccatcacctcctcttccctgtctgtgatctccttgtaccat
gtgctggccctgcaggccgaggtggaggggttgagagccgaggtggtccgcaagagagag
gagcaaagcgggaaactagaagaacctatgagtggagcagaaaaacaaacccatgagcag
gaagaagaagagaacaaagagagaattgagtatctgcaaaagactgagatggatgatact
gtaacagagcatactgtcctgtcaaaaaggagcctgggtcacacgtcaaacaaagcagaa
tcccagccctgcttacagatgatggcaaacaacaagaagaaaactttccagaaagagttt
gctttggaaatatgcacagccatcccatggcaagtcgggctgaagcgtggctcggctctg
gaggaagagcagggcaccattttagtcaaagaggaaggattcttctttatctatagtcag
ctctccttttcccaggtttactacacagactccacgttcgccatgggccacattgtgatt
cgtataaagaagaacgttgtgggagacgagagtcagcatgtcgttctgttccgctgtatt
cagagcatgaatcgagtcaaccacttcaacacttgctacactggaggcgtagtgaagctg
gactctggagacagactggagcttctgatacctcgtacccacgcaaatatctctctagat
ggggattccaccttcttaggagcaataaaactggcctga
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