Labeo rohita (rohu): 127170889
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Entry
127170889 CDS
T09007
Symbol
fign
Name
(RefSeq) fidgetin isoform X1
KO
K26673
fidgetin
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lroh03036
]
127170889 (fign)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lroh04812
]
127170889 (fign)
Chromosome and associated proteins [BR:
lroh03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
127170889 (fign)
Cytoskeleton proteins [BR:
lroh04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
127170889 (fign)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Vps4_C
AAA_5
AAA_16
AAA_22
TIP49
TRSP
RuvB_N
Motif
Other DBs
NCBI-GeneID:
127170889
NCBI-ProteinID:
XP_050975153
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All DBs
Position
9:33443036..33612764
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AA seq
744 aa
AA seq
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MITSSSVHGLKMQWTPEHAQWAEQHFDISSTTRSPAHKAEAYRGHLQRTYQYAWANDDIS
ALTASNLLKKYAEKYSGILEGPSERALLCSYSESAPGLLNGRKSESEAWQEGIYPMSCAA
DVVSASKTGMTAALPPPDVTASVGSSTGVASSLTEPSYSSSNCGNHASTALHSGIPSQEF
ASSYNGSYLHSTYSGGQSTPALPSPHPSPLHSAGLLQPPPPPPPTLVPSYNASSPNLSSY
NYPPAGYPPQTPVAPGYSPGGAPPPSAYLPSGIAAPTPLPPATLPGYSYQSHNHAPIAPT
PLNGSSANTLKRKAFYMTGQGEMDSSYGNFNYSQQRSAQSPMYRMPDNSLVDSTRGNGFD
RNADTSSLAFKPTKQSMPSDQQRKFGSQSGRALTPPSYGSSKGSLGSLRSGESFGKFGSP
VLSDHGDDNRQHHPHSIGTATSSSHPAEEQLKNSDASLVEMVTTEILQQTPPVDWSDIAG
LEMAKATIKDEVLWPILRPDMFSGMATLPRSILLFGPQGTGRTLLGRCMASQLGAAFLLL
SGSALVTKWLGEGEKIVQASFLVARCRQPSVVFISDVDLLLSAQLSEESPVNRIKSELLL
QLDGVLSSPEEHVLVVCSTSKPEEIDESLRRYFVKRLLVPLPDATARHQIISQLLSQHNY
CLNDKEVALLVQRTDGFSGLDVARLCQEAMVGPLHGMSGADLSGMMRPVSYQDFENVFCK
IQPSISQKELDTYTEWNKMFGCSQ
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atgatcactagctccagtgtacatggcttaaagatgcagtggaccccagagcatgcgcag
tgggccgagcagcatttcgacatctcatccaccacacgttcccccgcacataaagcagag
gcataccgcggacacctgcagcggacctaccagtacgcctgggccaatgacgacatatcg
gcactgacggcctccaaccttctgaagaagtatgccgagaagtattccggtatcctggag
ggtcccagtgagcgggcgctcctgtgctcgtactccgagagcgccccgggactcttgaac
ggacgcaagtcggagagcgaagcatggcaggaggggatctacccaatgagctgtgccgca
gatgtggtttctgcaagtaagactggcatgacggccgccttgcctcctccagatgtgacg
gcgagtgtcggcagctccacgggggtggcgagtagcttgaccgagcccagctactccagc
agtaactgcgggaatcatgcgtctactgcactgcactcggggatcccctctcaggaattc
gctagcagttacaatggctcgtacttgcattccacttacagcggcgggcagagcacccca
gctctcccgtccccacatccctcacctttgcacagcgctgggctccttcagcctccaccc
ccgccacctccaaccctagtgcccagctacaatgcaagttcccccaatctctccagttac
aattaccctccagcaggttatcccccacagactcccgttgccccaggctacagcccagga
ggagcaccccctccttcagcttacttgccctcaggcattgctgcccccactcccctaccc
cctgccactcttcccggttactcctaccagtcccacaaccatgcgccaattgcaccaaca
cctttgaatggcagctcggccaacacgttgaaaagaaaagcattttacatgacgggccag
ggagaaatggactccagttatggaaatttcaactacagccagcagcgttctgctcaaagc
cccatgtacagaatgccagacaacagtcttgttgactcaaccagagggaatggatttgac
aggaatgctgacacatcatctttggcgtttaagcccacaaagcagtcaatgccatcggat
cagcagcggaaattcggcagccagtccggaagggcgctaacccctccttcgtatggatcc
tccaaaggttccttgggatccctgcggtcaggcgagtcatttggaaagttcggttcccct
gttttgagtgaccacggggacgacaacagacagcatcacccccattccatcggcacggcc
acttcgtccagccaccccgctgaggagcagttaaaaaacagcgatgctagtttagtagag
atggtcaccactgagattctgcagcagacgccacctgtggactggagtgacattgctgga
ctggagatggcgaaagccaccatcaaagatgaggtcctgtggcctatcctgaggccagac
atgtttagcggtatggccacattacctcgcagcatccttctctttggacctcagggcacg
ggccggactctgctcggcaggtgtatggccagtcagcttggcgcggctttcctcctcctc
agtggctctgctctagtcacaaaatggctcggagagggcgagaagattgtccaggcctcg
ttccttgtcgctcgctgccggcagccttcagtggtcttcatcagcgatgtagatctgctg
ttgtctgcccagttgagtgaagaaagtccggtgaaccgaatcaagagtgaactcctcctc
cagcttgacggagttctgagctcaccagaggaacatgttcttgtagtatgttccaccagc
aaacctgaggagatcgacgagtctctacgaaggtactttgtaaagcggttgctcgtcccc
ttaccggatgccaccgcacgacaccagataatcagccagctgctctctcagcacaactac
tgcctcaacgacaaagaggttgcgctgctcgttcagcggacagacggcttctccgggttg
gatgtggcccggctttgccaggaggccatggttggtcctctccatggcatgtccggcgca
gacctttccggaatgatgcgaccggtgtcgtaccaagactttgagaatgtgttttgcaaa
atccagcccagcatatcacagaaagaactcgatacgtacactgaatggaataagatgttt
ggttgtagtcagtaa
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