Labeo rohita (rohu): 127170941
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Entry
127170941 CDS
T09007
Symbol
si:ch211-269e2.1
Name
(RefSeq) cohesin subunit SA-2
KO
K06671
cohesin complex subunit SA-1/2
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
127170941 (si:ch211-269e2.1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lroh03036
]
127170941 (si:ch211-269e2.1)
Chromosome and associated proteins [BR:
lroh03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
127170941 (si:ch211-269e2.1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HEAT_SCC3-SA
STAG
SCD
Cnd1
AAA_lid_5
DUF3124
WipA_N
Motif
Other DBs
NCBI-GeneID:
127170941
NCBI-ProteinID:
XP_050975250
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All DBs
Position
9:23368920..23398563
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AA seq
1176 aa
AA seq
DB search
MIAEPTLLSRSVQKENSVVDVSSCASVHHVSSERNENRQKTVRGKRKARECSENAKRKHS
KSSNGSLGRAENEQLKNGDVEAVTLFEVVSMGRSAMQAVVDDWIDAYTGDRDTALLDLIS
FFIQCSGCKGMVTAEMFQSKKGTDVMSKMVEDLDEDTGLQYKKFLAFPWILTVTWPLDMD
SGEYPLIMSGLYWKRFRSHFCEFVSVLVAQCQNCVIFDGYLLNTLISLLTELSDSRVRAF
RHTCTLAAVKLLSALVNVALNLTVSVDNSQRLYEVELAKMASKRASPRLDRIQRKINELQ
DRKFEIENMMDAIFKGVFLKRYRDVIPEIRAICMEELTVWMKLYSSVFLNDSYLKYVGWM
MHDKQPDVRLKCVLGLQALYQDQSCSKMDLFTIRFKERMISMTLDKDHEVAIQAMRLLMV
ISQSCEDVLSPDDHKNVFQFVYCSHRPLATTAGEFLYNRLLSNPELSRPRDKASDQEKHR
ELVLARIRALIHFHTESELHKHVLYLVDSLWDSAGALLKDWTGLTSLLLPHTSCQEQALS
SAEEAFVIELVLASVRQAAEGPPVSGRGAGKKVISTKEKKSQIDDCTKLTEHFIKVLPEL
LTKYSEDAEKLTSLLKIPQYFQMDTCDHENSQCVQALLAELEAAVNSHTDAGLLETAARS
YQTLCAQDFPWHSLARASFDRLIQHWTDTLGTRLGESLSDDCFNANKDNTLEILSTLKKL
NVFNIAQDLSKWSLYELETRLLDVEIKHGGLPMELTTEALRCMCCCILWKLNTFGEGVTS
RESALQQRSQLRAFCEKCHRCLSHAEQLVREQAFMCLSDVLIAHNYRLQMWDSSAGTPLL
YTPDPKLQKALLSFVVEHVFTSPEQDSHSSKVSESESGDGRLEDLHRRRNLLAAYCKLIV
HSVLEMSMAAEVFKQYVKYYNDFGDIIKETLNRTRQMDKIESARTLVQCLQQLYLRLKQE
QDRGNTCSSRVQTYSSIKELARRFSLTFGWDQIKSRESLAMIHRDGIEFVFKGFVQQSEK
HSPPYISYLTILSEFSSKLLKPDKKTIYSYLQKFAGEQVINNREECWMPLIYYRASLMGT
AEGEDAVSFISSDTNKQPSITNRSRSPSVKQLNSEGDQRFLSPSSDPKGNKLLKSFEDSK
VQQAPLSREQLTNSIVSAKGPRSIDEVDVDTVDIDD
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atgatagcagagccaactttactgtccagatcggtgcaaaaagagaactcagtagttgat
gtctcttcctgtgcatcggtgcatcacgtctcaagtgagagaaatgaaaaccgacagaag
actgtgagaggaaagaggaaagcccgggaatgctctgagaatgctaaacgaaagcattca
aagagcagtaatggcagcctgggcagagcagagaacgaacagctcaaaaatggagacgtg
gaagctgtcacactgtttgaggtggtcagcatgggcaggagcgccatgcaggctgtggtg
gatgactggattgacgcatatactggtgacagagacacagcactgctcgatctcatcagc
ttctttatccagtgttcaggatgcaaagggatggttacagcagagatgtttcagagcaaa
aagggtactgatgtcatgagcaaaatggtggaggatctggatgaggacacaggcttacaa
tacaagaagtttcttgcatttccatggattttaactgtcacgtggcctcttgacatggac
agtggcgagtatcccctcattatgtctggactatactggaagaggtttcgctcacacttc
tgtgagttcgtatctgtgctagtggcccagtgtcagaactgtgtaatctttgacggctac
ctcttgaatacactcatttcactgctgacggagctctccgattccagagttcgcgctttc
aggcacacctgtacgctagcagcagtgaagctgctcagcgctttggtgaatgtggctctc
aacctcactgtcagtgtcgataacagtcagcggctgtacgaggtcgagctggccaagatg
gccagcaaacgggcttctccgcggctggacaggatccagagaaagatcaatgagttacag
gacaggaaatttgaaattgagaacatgatggatgccatattcaaaggagtcttcctgaaa
agatacagagacgtgattcctgaaatcagggccatctgtatggaggaattgacggtgtgg
atgaaactgtatagttcagtgtttctgaacgacagctatctgaagtacgtaggatggatg
atgcatgacaagcaacctgatgtgcgtctgaaatgtgtgctgggtctgcaggcactttat
caagatcaaagttgttccaaaatggaccttttcacgataaggtttaaggagcggatgatt
tccatgactctggataaagaccatgaagtggccatacaggccatgagattgctcatggtc
atctctcaatcctgtgaggatgttctgagtcctgatgaccacaagaacgtcttccaattt
gtgtactgctcccacagacctctagcaaccactgcgggtgaattcctctataataggctg
ctcagtaaccctgaattatcaagacccagagacaaagcttccgatcaggagaaacacaga
gaattagtcttagccagaatccgagcccttatccacttccacactgaaagcgagctgcac
aagcatgtgctgtacctcgtggatagtctgtgggacagtgcaggagctctgctgaaggac
tggaccggtcttacctcactgctcttacctcacacatcctgtcaggaacaagctctgagc
agtgctgaggaggcctttgtgattgagctcgtgttggcgtcagtgagacaggctgcagag
ggtcctcctgtatcagggagaggggcaggtaaaaaggtgataagtactaaagagaaaaag
tcacaaattgatgactgcacaaaactcactgaacacttcattaaagtgctgcctgagctt
ttaaccaagtactcagaggatgctgaaaaactgacctctcttctaaaaatacctcagtat
ttccaaatggacacctgtgatcatgaaaactcacagtgtgtgcaggcattgctggctgag
ttggaggctgcggtgaacagtcacacagatgctgggctgctggagacggctgcccgttct
taccagaccctctgtgctcaggattttccctggcattctctggcccgggccagctttgac
cggctcatccagcactggacagacacactgggcacacggttaggagaatcactgagtgac
gattgtttcaatgcaaacaaggacaacactttggaaattctgtccacactgaagaaactt
aatgtattcaacattgctcaggatctgtctaaatggagcctgtatgagctggagaccaga
ctcctggatgtggagattaaacatggtggtcttccaatggagttgacaactgaagctctg
cgctgcatgtgttgctgcatactttggaagctcaacacctttggagaaggtgtgacctcc
agggagtccgccctccagcagagaagccagctacgtgccttctgtgagaaatgtcaccgc
tgtctctcgcacgctgagcagcttgtacgagagcaagccttcatgtgtctgagtgatgtt
ctcatagctcataattaccggcttcagatgtgggattcgtctgcaggcactccattgctg
tacacccctgatcccaaactccagaaagctcttctatcctttgtcgtggaacatgtcttc
accagccctgagcaggactcccacagtagtaaagtcagtgagagtgagtctggagacgga
cggctggaagacttgcaccggcggagaaatcttctggcggcgtactgcaagctcatagtg
cacagtgtactagagatgagcatggctgctgaggtttttaagcagtatgtgaagtactac
aatgacttcggcgacatcatcaaagagaccctgaacaggacacggcagatggacaagatc
gaaagcgcacgcacgctggtgcagtgccttcagcagctgtatctgaggctgaaacaggag
caggacagaggaaacacatgcagctccagagttcagacttacagcagcatcaaggagctg
gccagacgtttctcgctcaccttcggatgggaccagatcaaatcccgcgagtccctggcc
atgattcacagggacggaattgaatttgttttcaaagggttcgttcagcagtctgagaaa
cactctccaccgtacatctcatacctcaccatcctcagcgaattctcaagcaaactgctc
aaaccggacaagaagactatctacagttatttgcagaagtttgctggtgagcaggtcatc
aacaacagagaggaatgctggatgccgctgatttactacagagcgtctctgatgggcacg
gccgagggagaagatgccgtctccttcatcagctccgataccaacaaacagccctctatc
accaaccgctccagatcaccctctgtcaaacaactcaactctgaaggtgaccaaaggttt
ctttccccctcttcagacccaaaagggaacaagcttctgaaaagttttgaagactcgaaa
gtccaacaagccccactgagcagagagcagctgaccaacagtatcgtgtctgctaaaggt
ccaaggagcattgatgaagttgatgtggatactgtagatatcgacgactaa
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