Labeo rohita (rohu): 127170943
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Entry
127170943 CDS
T09007
Symbol
pou2f1b
Name
(RefSeq) POU domain, class 2, transcription factor 1b isoform X1
KO
K09364
POU domain transcription factor, class 2
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
127170943 (pou2f1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lroh03000
]
127170943 (pou2f1b)
03021 Transcription machinery [BR:
lroh03021
]
127170943 (pou2f1b)
Transcription factors [BR:
lroh03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
127170943 (pou2f1b)
Transcription machinery [BR:
lroh03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
127170943 (pou2f1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POU2F1_C
Pou
Homeodomain
Motif
Other DBs
NCBI-GeneID:
127170943
NCBI-ProteinID:
XP_050975255
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All DBs
Position
9:23297015..23320329
Genome browser
AA seq
701 aa
AA seq
DB search
MADGGAASQDESSGPDSRMSNPSETSKCAMESGDENTGAQTNGLDFQRQTVQTTSAITNA
HAQALLQQLTLTPAQQQLLLQQAQAQLLAAAVQHSAGQQSSTTGASISASAATPITQIPL
SQPIQITPQLQQLQQQQNLNLQQFVLVQPGHPIATQLQPAQFIISQTPQGQQSLLQAQNL
LTQLPQSQANLLQTQPSITLATQPATPTRTIAATPIQSLPHSQTTPKHIDTPSLEEPSDL
EELEQFAKTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPL
LEKWLNDAVCAENQTSDQALSSPSSLGSPGLGIEGLNRRRKKRTSIETNIRVALEKSFLE
QNQKPTSEEITMIADQLNMEKEVIRVWFCNRRQKEKRINPPSSGSAISTPIKAIFPPTTA
LVPSTASLVTSNTPTTMTVNPILPLTSTSVSSVGFTGTTIGSATTNTASVISTAPVITTA
ASSPSLSPSPTAAQTSSSEHTSAQETLTAVSQAPSSLATTLGTGQVMVAAPSLSAALQGA
AQLPTSASIAAMAAAAGLNPGLMASSQFTPGGALLSLAPGGLGSALSPALMSNSTLATIQ
GVWSALASSGTLPITSLDGSGNLLFANTSAGSTPNLVTAPLFLNPQNLSLLASNPVSLVS
AGGAAGAAGALNLHITADAHQNAVTTANMPASTITTASKAQ
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atggcggacggaggagcagcgagtcaagatgagagttcaggaccagattctagaatgagt
aatccatcggaaacaagtaaatgtgcaatggagagcggggacgaaaacactggtgcccaa
acaaatggactggactttcagaggcagactgtgcaaacaacaagcgcaatcaccaacgca
cacgcacaggccttgctccaacagttgactttgactccagcgcagcagcagttattgctg
cagcaggctcaggctcagctcttagcagcagcggtgcagcattcagccggccagcagagc
agcactacaggagccagcatctctgcctccgctgccacccccatcacccagatccccctc
tcccaacccatccagatcacacctcagttacagcagctgcaacagcagcagaacctcaac
ctgcagcagtttgtgttggtccagccgggccaccccatcgcaacacagctgcagcccgcg
cagttcatcatctcgcagacaccacagggccagcagagtctcctgcaggcccagaacctt
ctaactcaactacctcaaagccaagccaacctcctgcagacccagccaagcatcacactt
gccacacagcctgctacacccacacgcacgatagcagcgacccccatccaatcccttcct
cacagccagacaacaccaaagcacatcgacacacccagcctggaagagcccagcgacctg
gaggaacttgagcagtttgccaagaccttcaaacagagacgtatcaaactgggcttcacg
cagggggatgttggccttgccatgggaaaactttacggaaatgacttcagccaaaccacc
atttctcgctttgaggccttgaacctgagctttaaaaacatgtgcaaactgaagcctctg
cttgaaaaatggctcaatgatgcagtttgtgcagagaaccagacatctgaccaggccctg
tccagtcccagctctcttggctcgcctgggctgggcatagagggtctaaaccgccgccgc
aagaagaggaccagcattgagaccaacatcagagtggccttagaaaagagctttctggag
cagaaccaaaaacctacctctgaggagatcaccatgatcgcggaccagctcaacatggag
aaagaggttatccgagtatggttctgtaaccgcagacagaaagagaagaggatcaaccca
cccagcagtggcagcgccatcagcactcctatcaaagcaatcttccctcccaccacagct
ctggtgccgagtacagcgagtcttgtgaccagtaacacaccgactacgatgactgtaaac
ccaattttgcctctcaccagcactagtgtctccagcgtcggtttcactggcacaactatt
ggctcggctaccactaacactgcatcggtcatctccactgcacctgtgatcaccaccgca
gcatcctctccttcgctcagcccttctcccaccgcagcgcagacgtcctcctcagagcac
acttcagctcaggagacgttgacggcagtaagtcaggcaccttcctccctggcgacaact
ctgggcactgggcaggtgatggtggcggcacccagcctctcagccgctctgcaaggagcc
gcccagctgcccaccagcgccagcatcgccgccatggctgcagccgcaggcctcaatcct
gggctcatggcatcgtcgcagttcactcctggtggagctcttctaagtttggcacccggt
ggtctcggaagcgctttgagtccagcactgatgagcaacagcaccttggccacgatccaa
ggtgtgtggagcgctctggcgtctagtggcactctgcccattacatctctggatgggagc
gggaacttgctgtttgccaacaccagcgctggtagcacccctaacctcgtgacggcaccg
ctctttctgaaccctcagaacttgtcgctgctcgccagtaacccggtcagcctggtgtct
gcgggaggggccgctggtgccgccggagccctcaacctgcacatcaccgccgatgcccat
cagaacgctgttaccacagcaaatatgcccgcctccaccatcaccacggcctctaaggcc
cagtga
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