Labeo rohita (rohu): 127171038
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Entry
127171038 CDS
T09007
Name
(RefSeq) guanylate-binding protein 1
KO
K20899
guanylate-binding protein 1/3/4/7
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
127171038
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Motif
Pfam:
GBP
GBP_C
MMR_HSR1
RHD3_GTPase
Motif
Other DBs
NCBI-GeneID:
127171038
NCBI-ProteinID:
XP_050975405
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Position
9:complement(41224236..41273808)
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AA seq
648 aa
AA seq
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MDKPVCLIDTASDGKLFVQQSALQVLEQIQQPVVVVAVVGLYRTGKSYLMNRLAGKQTGF
ALGSTIESKTKGIWMWCVPHPTKTGTTLVLLDTEGLGDVDKGDSKHDTKIFSLSVLLSST
LVLNSQGTIDNRAIEELQYVTELTEYIKIKSSDEDEEDSEFVKFFPSFIWAVRDFTLEQK
INGKYVTEDQYLEFALKLKPGSSRTVNEFNLPRQCIRNYFPSRKCFTFPFPTAPENVSRL
ESLDPSDLSPDFQEVTERFCKFVCDKSEVKKLKDGYTVTGRVLGHFAKTYVDTIASGKVP
FLENAVIALAMIENEAAVKEGLEVYQSGMEKLKNSFPLELKDVSSEHQCLSRTATEVLMK
RSFKDSEGTYLKSLEEGINKLFDGYLCQNEEASKKRCENILSSLSETMTEKLKKGFYAKP
GGYDLFSQDLEDIVKKYKIQANKGVKAEDTLEEFLKQKSVESNAILQTDNKLTEKEKKIM
EEREKAILLAQEINTKEEKQRQLEEKMEAERRGNEETMIQMKKKMDEEMRHQREEAQRAT
DSKLREQAALLEKGFQEKADRMSKEIEDFRRKNKNAEKENDKLFKKMITNMNKRHTETMN
LMKRQHSEQMELIRSMPKPSSDYFPGLVLRLLVAGISSLTGCPVKAPI
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atggataaaccagtatgcttgattgacacggcgtccgacgggaagctgtttgtccagcag
tcagcgttgcaggttctggagcagatccagcagccagtggtggtggtggccgtggtgggt
ctctaccgcaccgggaagtcctacctgatgaatcgactggcagggaaacaaacagggttt
gcactgggcagcacaattgagtccaagacgaagggcatctggatgtggtgtgtacctcac
cccactaaaacaggaaccactctggtgctgctggacaccgagggacttggggacgtggac
aagggggactcaaagcatgataccaagatcttttcactgtctgtccttctgagtagcact
ctagtgctgaacagccaagggacgatcgacaacagagctattgaggaactgcaatatgtc
acagagttaaccgagtacatcaagatcaaatcatctgatgaggatgaagaggactcagag
tttgttaagttcttccccagtttcatctgggcagtgagggacttcactctagaacaaaaa
ataaatggcaaatacgtgaccgaggaccaatacttggaatttgccttaaagctgaaacca
ggctcttcaagaacagtcaacgagttcaaccttccacggcaatgtatccgaaattatttc
ccatcccggaagtgttttacttttcctttcccaaccgccccagagaatgtgtctcgtctg
gaaagtctggatccttctgacctttccccagatttccaggaggtcacagaacgtttctgc
aagtttgtctgtgacaagagcgaagtaaagaagctaaaggatggatacacagtcactggc
agagtcctgggtcactttgcgaagacatatgtagacacgattgccagcggtaaagttcca
tttctggagaatgctgtgatcgccttggcaatgattgagaatgaggctgcggtgaaggag
gggcttgaggtgtaccagagtggaatggagaagctgaagaactccttccctctggaactg
aaggacgtatcatcagaacatcagtgtctcagcaggactgcaacagaggtcttaatgaag
cgttcctttaaggacagcgaggggacatacctgaaatctctagaggaaggcattaacaaa
ctctttgatggatacttatgtcaaaatgaggaggcttcaaagaaaagatgtgagaatatt
ctgtcatccctctctgaaacaatgacagagaagctcaagaagggattctatgccaaacct
ggtggttatgatctcttctcccaggaccttgaagatattgtgaagaaatataaaatccaa
gccaataaaggagtcaaggcagaagacacacttgaagagtttctgaagcagaagtcggtg
gagtctaatgcaattctgcagactgacaataaactgacggagaaggagaaaaaaataatg
gaggaaagagagaaggccattctcctggctcaagaaataaataccaaggaagagaagcag
cgacaactagaagagaagatggaagcagagagaaggggtaatgaagagacgatgatacag
atgaagaaaaagatggatgaggagatgaggcatcagagagaagaggcccaacgtgccaca
gacagcaaactaagggaacaggctgctttgttggagaagggctttcaggagaaggctgac
aggatgtcaaaagagattgaggacttcaggaggaagaataaaaatgcagagaaggaaaat
gacaaactgtttaaaaagatgataacaaacatgaacaaaagacacactgagaccatgaat
ctgatgaagaggcaacacagtgagcagatggagttaattaggagcatgccaaagccttcg
tctgattatttccccggtctagtcttacgtctgctagttgctggtatcagcagcctaacc
ggttgccctgttaaagcacccatctag
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