Labeo rohita (rohu): 127171150
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Entry
127171150 CDS
T09007
Symbol
runx1
Name
(RefSeq) runt-related transcription factor 1 isoform X1
KO
K08367
runt-related transcription factor 1
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
127171150 (runx1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lroh03000
]
127171150 (runx1)
Transcription factors [BR:
lroh03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Runt
127171150 (runx1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Runt
RunxI
Motif
Other DBs
NCBI-GeneID:
127171150
NCBI-ProteinID:
XP_050975574
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All DBs
Position
1:48619849..48674292
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AA seq
514 aa
AA seq
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MHRIQGQNRLAGPAQGDHGFQGQSREPFKIREHIKLEALDSDEDEARQPSGAMASNSIFE
SFPSYQSCFSREPAPGRRFTPPSTTLSSGKMNEGLPLGAQESSGAALVGKLRMADRSMVE
VLSDHPGELVRTDSPNFLCSVLPTHWRCNKTLPIAFKVVALGDIPDGTLVTVMAGNDENY
SAELRNATAAIKNQVARFNDLRFVGRSGRGKSFTLTITVFTNPPQVATYQRAIKITVDGP
REPRRHRQKPDEAVKPGALAFSEQLRRSAMRCSPHHGPAPNPRPALNTPPFSSPAHSQIS
DSRQMQTSPSWSYEQSYPYLGPISTPAVHPTTPISPSRNAIHCPDLTAFTDPRVGLERSF
PSLPSLPDGRFSDPRVPYPTGAFTYTPTPVTNAIGIGMSAMTSPAGRYHTYLPPAYPAGS
SQAQAGAFQAGSSPYHLYYSSAAGSYQFSMMPGGGGGGGERSPPRILPPCTNASTGSALL
HPSLPNQSEVVVEAEGSHSSSPTSMSVEAVWRPY
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgcacagaatccaaggacagaaccgcctcgctggaccagcgcagggcgaccatgggttt
caggggcaaagccgggagcccttcaaaattcgggagcatatcaagttggaagcgttggat
tcggacgaagacgaggcgaggcagccgtcgggagccatggcctccaacagcatcttcgaa
agcttcccgtcctaccagtcgtgcttctccagggaacctgcgcctgggcgacgcttcacg
cctccctcgaccaccctgagctcggggaagatgaatgaggggttgcccctgggggctcag
gagagcagcggcgccgccctggtgggcaaactgcgtatggctgaccggagcatggtggag
gtgctttccgaccacccaggagagctggtgcgcaccgacagccccaacttcctctgctct
gtcctgccaacacactggcgctgcaacaagacgctgcccatcgccttcaaggtggttgcc
ctcggtgacatccctgatggcacgctggtcacagtgatggccggcaacgatgagaattac
tcagccgaactccgcaatgctacagctgccatcaagaaccaagtggcccgttttaacgac
ctgcgtttcgtcggccgcagcggaagaggcaagagtttcactctcaccatcaccgtcttc
acaaaccctcctcaggtggccacgtatcagagagccataaagatcactgtggacggaccc
cgagaaccacgacgccaccgacagaagccggatgaagcggtaaagccaggcgcgttagct
ttctctgaacagttgcgacgaagtgccatgcggtgcagtccacaccacggccccgccccc
aacccccgccccgccctcaacacgccccccttcagcagccccgcccacagccagatttcc
gattctaggcagatgcagacgtctccatcctggtcctacgagcagtcgtacccttacctg
ggccccatctccaccccagcggttcaccccaccacgcccatctcacccagccgcaacgct
atacactgtccagatctgacggcgttcaccgaccctcgtgtgggtctggagcgttccttc
ccgtcgctcccctcgctgccggacggccgtttctcggacccgcgcgtgccgtaccccacc
ggagcgttcacgtacacgcccacccccgtcaccaacgccatcggcatcggtatgtcggcc
atgacaagcccggcgggccgctaccacacgtacttacccccggcgtacccggcgggctcc
tcgcaggctcaggccggagccttccaggccggctcgtctccatatcacctgtactacagc
agcgctgccggctcctaccagttctccatgatgccgggcggaggaggaggaggcggcgag
cgttcgcccccgcgcattttaccgccctgcaccaacgcctccacgggctccgccctcctg
cacccctctctgcccaatcagagcgaggtggtggtggaggccgagggaagccacagcagt
tcgccgaccagcatgtcggtggaagccgtctggaggccgtattga
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