Labeo rohita (rohu): 127171158
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Entry
127171158 CDS
T09007
Symbol
ncam2
Name
(RefSeq) neural cell adhesion molecule 2 isoform X1
KO
K06491
neural cell adhesion molecule
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
lroh04514
Cell adhesion molecule (CAM) interaction
lroh04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
127171158 (ncam2)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
127171158 (ncam2)
04517 IgSF CAM signaling
127171158 (ncam2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lroh04131
]
127171158 (ncam2)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lroh04515
]
127171158 (ncam2)
04090 CD molecules [BR:
lroh04090
]
127171158 (ncam2)
00536 Glycosaminoglycan binding proteins [BR:
lroh00536
]
127171158 (ncam2)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
lroh00537
]
127171158 (ncam2)
04091 Lectins [BR:
lroh04091
]
127171158 (ncam2)
Membrane trafficking [BR:
lroh04131
]
Exocytosis
Tethering complex
Exocyst complex assembly proteins
127171158 (ncam2)
Cell adhesion molecules [BR:
lroh04515
]
Immunoglobulin superfamily
NCAM1/2
127171158 (ncam2)
CD molecules [BR:
lroh04090
]
Proteins
127171158 (ncam2)
Glycosaminoglycan binding proteins [BR:
lroh00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
127171158 (ncam2)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
lroh00537
]
Others
127171158 (ncam2)
Lectins [BR:
lroh04091
]
I-type lectins (Siglecs)
127171158 (ncam2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
fn3
V-set
FN3_DSCAM-DSCAML_C
Ig_VEGFR-1-like_5th
VEGFR1-3_N_Ig-like
C2-set_2
Fn3_ROS1
Ig_PDGFR_d4
Pur_ac_phosph_N
Ig_C17orf99
Ig_4
Izumo-Ig
Ig_6
Ig_5
Ig_MYOM1
V-set_CD47
Ig_ANOS1
Receptor_2B4
DUF1410
Ig_Rha78A_N
NDNF
Fn3_VIN3
Fn3_ELFN
Fn3_PBP1
Motif
Other DBs
NCBI-GeneID:
127171158
NCBI-ProteinID:
XP_050975585
LinkDB
All DBs
Position
9:complement(23991439..24223234)
Genome browser
AA seq
795 aa
AA seq
DB search
MIRTVLCFLGLLVGGSQGVLQVSISLKKVELSVGESKFFTCTVIGEPVSLDWYNPQGERM
VPSQRVALHNEGVRSRLTLYNAKIEDAGIYRCQANDAQGHTEEATVVLEIYQKLTFRDVR
SPQEFRQGDVAEVVCDVTSSPVPVVSWFYNNEEIIEDTEKFQLLQNNNLQVQRVTKADEG
VYRCEARVEARGEIDFRDIILVVNVPPVVSVPQQSFNATADYGESVTFTCRAYGSPEPDV
TWHRKGVQLQESERYVMRARGTTLTVRNIQQDDGGSYTCKASNKAGEVEHELFLKVFVQP
HITKLRNVTAVEGSAAMISCKAEGEPLPEISWRRASDGHSFSDGDKSPDGRVEVRGRYGE
SMLTIVGVKLSDWGRFDCEALSRIGGHQKSMFLDIEYAPKFQTNHTIFFSWEGNPVNISC
DVMSNPPATMLWRREKLTIPSEGAGNMRVHSAPGRSLLEVTPMSDRDFGRYNCTARNNIG
MRYQEFILAQADVPSNPYSVRLSSVAQRVATVTFTKPDSHGGVPISHYLVKYKDISAQDW
KDVKSQGTQTIVLLTNLEPNTTYEVRVAAVNGKGQGEFSRTESFQTLPIREPSPPSVQGQ
RGVGKAYRLGLVKQDDGGMPILEYIVKYKTDKEEQWMTKLVPGVNDFVLLQPLQWNTQYE
VEITARNVKGLSEPTFVKFSMPQKPDITADSLFSGLGLGAVVGLGLAGLLLLLVLVDVSC
FFLRQCGLLMCITRKLCSKKTATSGKSKELEEGKAAYLKLPLKEENGKETLKPDTIEIKV
HGDNSLHMTQEDSKA
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgattcggaccgtcctctgtttcctcggattgctcgtcggtggcagtcaaggtgtcctc
caggtgtcaatctcgctgaaaaaggtggagctgagcgtcggagagtccaagtttttcaca
tgcacagtgattggggagcctgtgagtctggactggtataacccacagggggagcggatg
gtcccatctcagcgggtggccctgcacaatgaaggtgttcgttccagactcaccctctac
aatgccaaaatagaagatgctggcatataccggtgccaggccaacgatgcacagggacat
acagaggaggccactgtggtgctggaaatctaccagaagctgacattcagagatgtgagg
tctcctcaggagtttcgacagggtgatgtggctgaagtggtctgtgatgtcaccagttct
cctgtacctgtggtttcctggttttacaacaatgaggagatcattgaagacactgagaag
tttcaactcctacaaaacaacaatttgcaagtccagagagtaactaaagcagatgaagga
gtgtatcgctgtgaggccagagtcgaagccaggggagagattgacttccgggacatcatc
ctggtggttaacgttccgccggtcgtctctgtgccgcagcagtcctttaacgccactgcg
gactatggagaatctgtgaccttcacctgccgggcttacggctcacctgaacctgatgtt
acgtggcacaggaagggagtgcagctccaggaatcggagcggtatgtaatgagagctcga
ggtacaacgctcacagttcgaaacattcagcaggacgacgggggctcctacacctgcaaa
gcctctaacaaggcgggagaagttgagcacgaactgtttctcaaggtttttgtccagccc
cacattactaagctaaggaacgtgacggctgtggagggcagtgctgctatgatttcctgc
aaggctgaaggtgaacctttgcctgaaatctcctggaggagagcaagtgatggccacagc
ttttcagatggagataagagtccagacggccgtgtggaggtgcgaggccgttacggggaa
tccatgctgactattgtcggagtcaagctgtctgactggggacgtttcgactgtgaggct
ctcagcaggatcggtggacatcagaagagcatgtttctggatattgagtatgcaccaaag
ttccagaccaaccacactatatttttctcgtgggaagggaacccagtcaacattagctgt
gatgttatgtctaaccctccggccacaatgctgtggagacgggaaaagttgaccatcccc
agtgagggcgctggaaacatgcgtgtacacagtgcccccggcagatcactcctcgaggtt
acaccaatgtcagacagagatttcggccgttacaactgcacagccagaaacaacattggt
atgcgctatcaggagttcatcttagcacaggcagatgttccctcaaacccttactctgtt
cggctgagctctgtggcacagcgcgtggccacagttaccttcacgaagccagactcccat
ggcggtgtacccatcagtcactacctggtcaaatacaaagacatcagcgcacaggactgg
aaggatgtgaaatcacaggggacgcagacaatcgtgttgctcactaaccttgagcccaac
acaacctacgaggtgagagtagctgcggtgaatggaaaaggtcaaggggagttcagccgc
acggagagctttcaaactctacccatacgagagccgagtcccccttcggttcagggtcag
cgaggggtggggaaggcgtaccgactgggtctagtcaagcaggatgatggaggaatgccc
atcctggaatatattgtcaaatacaaaacagataaggaagagcagtggatgacaaaactt
gttcctggtgtgaatgatttcgtgctgctgcaaccgctccagtggaatactcagtatgag
gtggaaattactgcacgcaacgtcaaaggcctgtctgaacccacctttgtgaagttctcc
atgcctcagaaacccgacatcacagcagattcgctgttcagcggcctaggtctgggcgca
gtggttgggctggggttagctggcctgctgctgctgctcgtgctagtggacgtcagctgc
tttttcctgcgccagtgcggcttgcttatgtgcatcacccgcaagctctgcagcaaaaag
acagccacaagcggcaagagcaaagagctagaggagggcaaagctgcctacctgaaattg
ccactaaaagaggaaaacggcaaggagacgctgaaaccagacacaatcgagatcaaagtt
cacggtgacaacagcctacacatgacacaggaggacagtaaagcgtaa
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