Labeo rohita (rohu): 127171159
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Entry
127171159 CDS
T09007
Symbol
appb
Name
(RefSeq) LOW QUALITY PROTEIN: amyloid beta (A4) precursor protein b
KO
K04520
amyloid beta A4 protein
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
127171159 (appb)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lroh01002
]
127171159 (appb)
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
lroh00535
]
127171159 (appb)
00536 Glycosaminoglycan binding proteins [BR:
lroh00536
]
127171159 (appb)
Peptidases and inhibitors [BR:
lroh01002
]
Peptidase inhibitors
Family I2: Kunitz - BPTI family
127171159 (appb)
Proteoglycans [BR:
lroh00535
]
Cell surface proteoglycans
Others
127171159 (appb)
Glycosaminoglycan binding proteins [BR:
lroh00536
]
Heparan sulfate / Heparin
Others
127171159 (appb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
APP_E2
APP_N
APP_Cu_bd
APP_amyloid
Kunitz_BPTI
Beta-APP
eIF-3c_N
HrpE
Insulin_TMD
Motif
Other DBs
NCBI-GeneID:
127171159
NCBI-ProteinID:
XP_050975588
LinkDB
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Position
9:complement(23879486..23904912)
Genome browser
AA seq
751 aa
AA seq
DB search
MGMDRTVSLLLMLTTLSLAIEVPSDDSVGLLAEPQVAMFCGKLNMHINIQSGKWEPDPTG
TKSCIGTKEGILQYCQEVYPDLQITNVVEANQPVSIQNWCKTGRRQCRSHTRIVVPYRCL
VGEFVSDALLVPDKCKFLHQERMDMCESHLHWHTVAKESCGDRSMNLHDYGMLLPCGIDR
FRGVEFVCCPMEEQKELDSEEQEEANSDVWWGGAEAEYTDSSVLREQAPTKPEPAVTEDD
EDINNEEEEVWDNDEDGDGEDDEDEEDDDEDTTDEQDTSEQTSNVAMTTTTTTTTESIEE
VVRAVCWAPPRSGPCHAKLSRWYFVAQTGQCAPFMFGGCGGNRNNFESEEYCMAVCSSSA
LPTMAPSPADAVDRYLEAPGDMNEHTRFQKAKESLEAKHREKMSEVMREWEEAERQAKNL
PRADKKTIIQRFQEKVEALEKEAAGERQQLVETHMARVEALLNDRRRQALESYLSTLQSD
QPRPRQVLNLLKKYIRAEQKDRQHTLKHFEHVREVDPKKASQIRPFVMTHLRVIEERMNQ
SLGYLYKVPQVANEIQDQVALLIQRDQAEVTQQLSSLQSKMRVSYGNDALMPDLPDSTTP
LDNLPPEQDGLGFIHPESFNQANTDNHVEPVDARPIPERGLPTRPEIPKVRLDIEERHNA
GYDVRDKRLMFLAEDMGSNKGAIIGLMVGGVVIATVIVITLVMLRKKQYTSIHHGVIEVD
AAVTPEERHLTKMQQNGYENPTYKFFEQMQN
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atgggtatggaccgtacggtatccctgctgttaatgctgacgactctgtcgctcgccatc
gaggtgccatcggatgactcagtgggcttgttggcggagccccaggtggccatgttttgt
gggaaactcaacatgcatatcaacatccagagtggcaagtgggagccagatccaactggc
accaagagctgcatcggcaccaaagagggcatccttcagtactgccaagaggtataccca
gatctccagatcactaacgtagtggaggccaaccagcccgtcagcatccagaactggtgc
aaaacgggtcgtcgccagtgccgcagtcacacgcgcattgtggttccctaccgctgcctg
gttggcgagtttgtcagcgatgccctccttgtcccagataagtgcaagttcctgcaccag
gagcgaatggacatgtgtgagagtcatctgcactggcacacagtggccaaagagtcctgc
ggtgatcgttccatgaatctccacgactacggcatgctgctgccgtgcggcatcgaccgt
ttccgcggagtagagtttgtatgctgccctatggaggagcagaaggagttagacagcgag
gagcaggaggaggccaactcagatgtgtggtggggcggcgcagaagccgagtacacggac
agcagtgtactgagagaacaggctccgaccaaacctgaacctgctgtgactgaggatgat
gaggatatcaacaatgaggaagaggaagtctgggacaacgacgaagatggtgacggtgaa
gatgatgaagatgaggaagatgacgatgaagacacaactgatgaacaagacaccagtgag
cagacctccaatgttgcgatgaccaccaccaccactaccacaacagagtctatagaggag
gttgtgcgagcggtatgctgggcccctcctaggtcggggccgtgccatgccaagctatcc
cgctggtattttgtggcgcagacgggccaatgcgcccccttcatgtttgggggctgcggg
ggtaaccgcaataactttgagtctgaggagtactgcatggctgtctgcagcagcagtgcg
ttgccaaccatggccccgagccctgctgatgctgtggatcgttacctggaagctccagga
gatatgaatgagcacacccgcttccaaaaagcaaaggagagcctggaggctaaacacaga
gagaaaatgtcagaggtgatgagagaatgggaggaggcagagagacaggcgaagaacctt
cctcgtgctgataaaaagaccatcattcagcgcttccaggagaaggtggaggcgttggag
aaagaagcggccggggagagacagcagctggtagaaacccacatggcacgagtggaagct
ctgctgaatgaccgtcgccgccaggcactggaaagctaccttagcactctgcaatcggac
cagcctcggcctcggcaggtgcttaatctgttgaagaagtacatacgagcggagcagaaa
gacaggcagcacactctcaaacactttgagcatgtgcgagaggtggatcccaagaaggca
tctcagattcgaccatttgtgatgacccacctgcgtgtgattgaagaacgcatgaaccaa
tccttggggtatctctacaaggtgccacaagtggctaatgaaatccaggaccaagtggca
ttgcttattcagcgtgaccaggcagaagtcacccaacagctgtcgtctcttcagagtaag
atgagggtgagctatgggaacgatgccctgatgcccgacctgcctgacagcaccaccccc
ctggacaacctgccaccagagcaggacggcctagggttcatccaccccgaaagctttaac
caggccaacactgacaaccatgttgaacccgtagatgcccgtccaattccagaaaggggt
ctgcctacaagacccgagattccaaaggttcggctggacattgaggaaagacacaatgct
ggttatgatgttcgtgacaagagactgatgttccttgcagaagacatgggctctaataag
ggggcaataattggactgatggtgggtggagttgtcatcgcaactgtcatcgtaatcact
cttgttatgctaaggaagaagcagtacacttctattcaccatggagttattgaggtggat
gcagcggttacccctgaggaacgtcatctcactaagatgcagcagaacggctatgaaaac
cctacctacaagttctttgagcagatgcagaactaa
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