Labeo rohita (rohu): 127171160
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Entry
127171160 CDS
T09007
Symbol
gabpa
Name
(RefSeq) LOW QUALITY PROTEIN: GA-binding protein alpha chain
KO
K09441
GA-binding protein transcription factor, alpha
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lroh03000
]
127171160 (gabpa)
Transcription factors [BR:
lroh03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Ets-type
127171160 (gabpa)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ets
GABP-alpha
Ig_3
SAM_PNT
I-set
V-set
Ig_2
ig
ubiquitin
Motif
Other DBs
NCBI-GeneID:
127171160
NCBI-ProteinID:
XP_050975589
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All DBs
Position
9:23858171..23879409
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AA seq
687 aa
AA seq
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MSTTHILTFPALLMLLYIPSSDPVTVTTSKPKVEVHENTNAVLSCEFKTEKETNPRVEWK
KRGKDVSYVYFDGDFTGPFKGRASIDGATMTLRGVTQKDSGAYHCEVTARQDKIKLGEVT
VTLNVLVPPHAPSCEVPETVMKGFSAELRCKDKLSVPAATYSWYKDNKLLHPGNLPEINY
TLDSKTGTLKFKSVSKSDEGQYRCEAYNGVGAPKSCAGRHMKITEFKQGVEGMSKSETEE
MIEIEIDGREKQECLEEGIEEQTITAAELITQDIDINEPIGNLKKLLEPRLQVPLDGYDI
CLQDILLHPDHSLFDQGVKTDGTVQLSVQIVTKQGEEKLNILEIVKPVETVEVVIDPDAA
AGEEAHLVEDGHVIAVERAAIPDETSEQVTRWAAALEGYRKEQVRLNIPYDPVQWTADQV
IHWAVWVMKEFGIEEMEVGGIHIPGRQLCGFSQEEFLQRVPSGEILWSHLELLRKYVLAS
QDQGQEATVTIDQPVQIIPAPVQQATPTAIKVMKHNKTPRAPRISGEERSSPGNRTGNNG
QIQLWQFLLELLTDKDSRDCISWVGEEGEFKLNQPELVAQKWGQRKNKPTMNYEKLSRAL
RYYYDGDMISKVQGKRFVYKFVCDLRTLIGYSAAELNSLVTECEQKKLARVQLHGLGQPV
NTVTLATATGQPVTTVTLAAAALEKDS
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgagcacaacacacatactaacctttcccgctcttctcatgctgctctacattcccagc
tcagatcctgtgactgtgacgacaagcaaacccaaagtggaggtacatgaaaacacaaat
gctgtcctgtcctgtgaattcaagacagagaaagaaacaaacccgcgtgttgaatggaaa
aagagaggcaaagatgtttcatatgtttattttgatggggattttacaggtccatttaag
ggccgtgcatccatcgacggggcaacgatgaccctccgtggtgttacacagaaagactca
ggagcatatcattgcgaagtcacagcccgccaggacaaaattaagctgggggaggtcact
gtcaccctcaatgtgcttgtgccgccacatgcaccatcatgtgaggtcccagaaacagtc
atgaaaggattttcagctgagctccgctgtaaagacaaactgagcgttcctgctgccacc
tacagctggtacaaagacaacaaactacttcatcctggcaatctccctgaaatcaactac
accctggactccaaaacagggacgctgaagttcaagtctgtgtcaaaatctgatgagggc
caatatcgatgtgaggcctacaatggggtgggggcacccaaaagttgtgcaggccggcat
atgaagattactgaatttaaacaaggagttgaagggatgtcaaaaagtgagacagaggag
atgattgaaattgagattgatggacgggagaaacaggagtgcctagaggaagggatcgag
gagcaaaccatcacagcggctgaactgattactcaagacattgacatcaatgagccgatt
ggtaacctgaaaaagttactggagcctcgtcttcaggtcccgctggatggatatgacatt
tgtctgcaggatatcctattgcatcctgatcacagcctgttcgatcaaggagtgaagaca
gatggcacagtacagctcagcgtgcagattgtcacgaagcagggtgaagagaaattgaat
attctggagattgtgaaaccagtagagactgtggaggtggtgatcgatccagatgcggct
gctggcgaggaagcccatctcgtggaggatggacacgtgattgcagtagagcgagccgcc
attcctgatgagacttcagagcaggtgacccgctgggcggccgcattggaagggtaccgc
aaggaacaggttcgactgaacattccctatgacccggtgcagtggacagcagatcaggtt
atccactgggcagtttgggttatgaaagagtttggcattgaggaaatggaggtgggtggc
attcacattcccggccgccagctctgcggttttagccaggaggagttccttcagagagtg
cccagcggagagatcctgtggagccacctggagcttctacgcaagtatgtacttgcgagt
caggatcagggtcaggaagcaacagtcaccattgatcaacctgtgcagatcattcctgcc
cctgtgcaacaggccacacctacagccattaaggtgatgaagcacaacaaaacaccccga
gccccccgtatctcaggagaggagcgcagctcccctggcaaccgcacaggtaacaacggc
cagattcagctgtggcagtttctcttggagctgctgacggataaggactctcgggactgc
atttcctgggtgggagaggaaggcgaattcaaacttaatcagcctgagctggtagctcag
aaatggggccagcgcaagaacaagcccaccatgaactacgagaagctaagcagagctctc
aggtactactatgacggagacatgatcagcaaagtgcagggcaagcgctttgtctacaag
tttgtgtgcgacctgaggactctgatcggatacagcgcggcagagctcaacagcctggtg
acggagtgcgaacagaagaaactggcccgggtgcagcttcacggcctcggccagcccgtc
aacacagtcacgctggccacggccacaggccagcccgtcaccacagtcactctggctgca
gcggctttagagaaagacagttga
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