Labeo rohita (rohu): 127171188
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Entry
127171188 CDS
T09007
Symbol
rrp1
Name
(RefSeq) ribosomal RNA processing protein 1 homolog B
KO
K14849
ribosomal RNA-processing protein 1
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lroh01009
]
127171188 (rrp1)
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lroh03009
]
127171188 (rrp1)
Protein phosphatases and associated proteins [BR:
lroh01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
127171188 (rrp1)
Ribosome biogenesis [BR:
lroh03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
127171188 (rrp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nop52
Motif
Other DBs
NCBI-GeneID:
127171188
NCBI-ProteinID:
XP_050975632
LinkDB
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Position
9:complement(40304773..40319667)
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AA seq
792 aa
AA seq
DB search
MAPVQEAEIIFAQKLASNEKPIRSKALVKLRKYISARSARAEGGFSEEELLKIWKGLFYC
QWMQDKPLLQEELSTKISRLLHSFRTVDSQFLYFKTFLQTMKREWNGIDILRMDKFYQLV
RFVFREVFEMLKRQEWESSLVSEFLQLISAQLLQSSSAAPTGFVLHILDLYMNELALVGS
AELTADQNQTFIEPFFKTMAKTKDRVLLKAIGSNIFNTIVDQVPYAIEDLKREIRQNAGE
ELDSCEESENNQDNEEKTQDCAENRDENEDWFLDDTDTKDDDTCGPVLQFDYGAIADRLF
ALASNSKIQSFNRSKIYKFVKIFRDLSEGVFPQDEVENVSSDDTDDDEDQKRKRKRRKRQ
KNKERKESSSLDKSNGQSESAAASDDTDISKEKKKSKKKRKNKSLKSVDGQTDPSEETQD
ADVEGAATDLTEKMESNAELSEGDSERTHVNSSTEPADKQPKAFKLLKRKRRKKTVSRKT
SEDTSEGANDSSEMEISVESAEIVTSVPLKKKQKLKKKAKEIGEGETGRESELTSACLTS
CISATTPVDVSTATPSKKRLKKPSSDKMTEAEVKEQCDSQKTVDTSDSSKASRKTTMKKK
KKQKDVVPEPDANGEVDDLQTETGQRPAGRMGMKKSKQKSAAEQITPARKRRVKEEEVKP
SQVNGHTDETSVKRPKIISEEPSVTKNKKAKEFVLRQKKAPAPIFCKAAGMSTRMASKKV
LPASKSEMKKVTFGLKNNKTMEFRKMDQSSLVSPVSQSRVAFDPKRTPKSGVLKSPSSSP
AVTKRAMAADFF
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atggcaccggtacaagaagcagaaatcatctttgctcagaaacttgcgtccaacgagaag
cctatcaggagcaaagccttggtgaagctcaggaaatacatcagtgcgcgatcagcgaga
gcagaaggtggtttcagtgaggaggagctgctgaagatatggaagggtctgttctactgc
cagtggatgcaggacaaaccgctgctgcaggaggaactgtcaacaaaaatctccaggctc
ctccacagctttcggacggtcgacagccagttcctgtattttaagacgtttcttcagacc
atgaagagagagtggaacggcatcgacatactgcgaatggacaaattctaccagcttgtc
cgctttgttttccgagaagtgtttgaaatgctgaagagacaggaatgggagtccagtctg
gtgagtgagtttcttcagctcatttcagctcagctcctgcaaagctccagcgcggctccg
accggattcgtccttcacattctcgacctctatatgaatgaactggcccttgtcggctca
gctgagctgacagcagaccagaaccagacctttattgagcctttcttcaagactatggcc
aaaaccaaagatcgggtcctgctgaaggccatcggcagcaatatctttaacaccatcgtt
gatcaagttccttacgccatcgaggatctgaagagagagattcgtcagaatgcaggggaa
gagctggactcatgtgaagaatctgaaaacaatcaggacaacgaagagaaaactcaagat
tgtgcggagaaccgtgatgaaaacgaggattggtttttggatgacacggacactaaggat
gacgacacatgtggacctgttcttcagttcgactatggtgctatagcggaccgacttttt
gcgctggccagtaactcaaagatacagagcttcaacaggtccaagatttacaagtttgtg
aaaattttccgagacctgagtgaaggtgtgttccctcaggatgaagtggagaatgtgtcc
tctgatgatacagatgatgatgaagatcaaaaaagaaagcgaaaaaggagaaagagacaa
aagaataaagagaggaaagagtcgtcgtcactggacaaatccaacggtcaatcagagtca
gcggctgcgtcagatgacactgacatatcaaaggaaaaaaagaaaagcaagaaaaagaga
aagaacaaaagtttaaagagtgttgatggccagacagacccttcagaggagacacaggac
gctgatgttgagggagcagccacagatttaacagaaaagatggagtctaatgctgaactc
tcagaaggtgacagtgaaagaacgcatgtgaattcaagcactgaacctgcagacaaacag
ccgaaagcctttaaacttctgaagaggaagcggaggaagaagactgtttcgagaaagacg
tctgaagacacatcagagggagcaaatgacagctcagagatggaaattagtgttgaatca
gcagagatcgtgacttctgtaccgctgaagaaaaagcaaaaactgaagaaaaaagcaaaa
gagattggtgaaggagaaactggacgtgaatctgagctcacttctgcttgtttaacaagc
tgcatctcagccaccacacccgtagatgtgtcaacagccacaccgtccaagaagaggctg
aaaaagccctcctcagacaagatgacggaggctgaagtcaaagaacagtgtgattcacag
aagaccgtagacacctctgactcctctaaagcctcacgaaaaacaacaatgaagaagaag
aaaaaacagaaagacgttgtcccggagccagacgccaatggagaagttgatgacttgcag
acagagacagggcagcggcctgctggaagaatgggaatgaagaagagcaagcagaaatcg
gcagcagagcagatcacgccagcgaggaagaggagggtgaaggaggaagaggtgaagcct
tcacaggtgaatggacacacagacgagacgagtgtcaagagacctaaaatcatcagcgaa
gagccttcagtcactaaaaacaagaaggctaaagagtttgtcctcagacagaagaaagct
cccgcacccatcttctgtaaagctgcaggaatgagcacacgcatggccagtaaaaaggtt
ttgccagcttcaaaatctgaaatgaagaaagtcacatttggtctcaagaataataaaaca
atggaattcaggaagatggaccaaagctcactggtgagtcctgtcagtcaatctcgcgtg
gcctttgaccccaagaggacgccaaagtctggggtgttgaagtcgccctcgtcatcgcct
gctgtcacgaaaagagccatggcagcagatttcttttaa
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