Labeo rohita (rohu): 127171217
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Entry
127171217 CDS
T09007
Symbol
tank
Name
(RefSeq) TRAF family member-associated NF-kappa-B activator isoform X1
KO
K12650
TRAF family member-associated NF-kappa-B activator
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04140
Autophagy - animal
lroh04621
NOD-like receptor signaling pathway
lroh04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
127171217 (tank)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
127171217 (tank)
04622 RIG-I-like receptor signaling pathway
127171217 (tank)
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GFIT
Motif
Pfam:
TBD
LXG
HIP1_clath_bdg
TACC_C
DUF7310
DUF5614
Bacillus_HBL
DUF4618
Sec10_N
Rootletin
DUF641
Motif
Other DBs
NCBI-GeneID:
127171217
NCBI-ProteinID:
XP_050975684
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Position
9:complement(34059654..34080402)
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AA seq
297 aa
AA seq
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MDRTISEQLNKAFEAYRNASIEKELAKKELQHKTEQYQRHTQQLERKIEEQAKTISHLKT
ELSSLRKHASGEVCEPAYRKQEAETLSPSDHRSDNPSSSHRTNHFLINEPTEYSRMLPHS
ISAACEMKSENVLDTWQEIQGTFQRIQTLTRRQKDHLKRIHKGNETANEQFSMPIQCTEG
TAERAEVPFPSPLRSEVEDASASTSLASRGAGPDGTFFDSLRGLSVKFPPSTEDEYDFLN
STPDKQVDLPLHRPDLGDNLHTMREESYPSYSAPSPSTHTSGSSASHENVRGPQQVK
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atggacaggaccattagtgagcagctcaacaaagccttcgaagcgtaccgcaatgcgtcc
atcgaaaaagagttggccaaaaaggagcttcagcataagaccgagcagtatcaacggcac
actcagcagctggagagaaagatagaggagcaggcgaagaccatctcacatcttaaaacc
gaactcagttctcttcgtaaacatgcgtcaggggaggtctgtgagcctgcgtacagaaaa
caggaagcagaaaccttgtcacctagcgatcatcgctctgacaacccatccagttcccac
aggactaaccatttcctgataaacgaacccacagagtattccaggatgcttccccattcg
atatctgctgcctgcgaaatgaagagtgagaatgtgctggacacttggcaggaaatccag
gggactttccagaggattcagactctaaccagaaggcagaaagatcacctaaagcgaatc
cacaaaggaaacgagacggctaatgagcagttttccatgcccatccagtgcaccgaaggc
acggcagaacgggccgaagttccttttccctcaccgctgaggtcagaggttgaagatgct
tcagcctccacctccctcgcgtcacgtggcgccggcccggacggaacgttttttgattcc
ctaagaggcctgagtgtgaagtttcccccgagcacagaagacgagtacgactttctaaac
agtacgccggataaacaggtggacctgccccttcacaggccagaccttggagacaacctg
cacacgatgagggaggagtcttatccgtcatactctgcaccttctccgtccactcacacg
tctggatcttctgcatcgcacgaaaatgtacgaggaccccaacaggtaaaatag
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