Labeo rohita (rohu): 127171271
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Entry
127171271 CDS
T09007
Symbol
aff3
Name
(RefSeq) AF4/FMR2 family member 3 isoform X1
KO
K15195
AF4/FMR2 family member 3
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lroh03021
]
127171271 (aff3)
Transcription machinery [BR:
lroh03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
127171271 (aff3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AFF4_CHD
AF-4
AF4_int
Motif
Other DBs
NCBI-GeneID:
127171271
NCBI-ProteinID:
XP_050975774
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All DBs
Position
9:complement(14466422..14491056)
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AA seq
1252 aa
AA seq
DB search
MPTIYGSKGKLASVFFMLQHASQDMTQSWPYQQPPGEGGTQHFLYSHSKEGKQPSSRHRH
VRDGVSMRMPSRPLVAPHKSMLADDLKLSSDEDDKDEGSEQTTSWADNDRLSGQQQHHTS
THVGRVRHSSSGSSGSDPSSEWESSSQRSRSPSPGTHNRCGTPTQQRSLNCSTETESPPS
TQWQLDRWLEKAPKNHQSTDHDPGGGQRRSAKSDCGRGPSPGRYWSRDPESRQDYSPCES
PVPSPKFDYSPRNSPHPSPEYSPCPSPGISLVPSPVPSVCPSPGDSFRGSRSPSPLLLHP
PRSPSPSLSTAAVPSQGTYPQVQRPKQESPRHIARPNSASNPAHRPKVRPWVPPDQRKEF
RPKDSRSRDSRSKDSRAGPPQQPRHSEHSSPKKSHKDLTHKLEAKNSESTSKQRFNSPSN
PISKHSSKQRPSPKPQARHSSTTDHSIEHNHRSNELTGVSIHSSHSKSGHSSHFNTLKSS
DRGPSSKSRDSSQSEVNSRSSHSSKTKSFPDTKQSSSKQTSQHSSSPKPKVKLGDTPVSR
TRHSQKVPKPREREREVDSRGKAQGATLVQTGREQRQRRLAEEQVIRRRWVRSSEEEEEE
EDRRNEEGERERKRRRRREQEVEWKAVQPKQRPHTNSQHHAQKEYNGHNLKEQRRKKRRW
SNEDISSGPHVTDTSLSPPLSPPSPTPVIKPIRPSSSSSSSSSSSSSSSSSSSESDSEFS
PPRNVAKVPADSTSNQKTVSKRRHDKQGSGTGPQPHGSNLGTPETDKQGRGRHKLYTLVP
FGRTEKSPTVAHRGLRKLVVRIDLSLLGRVPSTDEITERQSSSSALSSGKTKEKTPMKHQ
HHLDQLPGDGRSKRKAENGDAQRESKRNHSRADKLPVPVHNESEETLNKQNGTALQKLQE
ITTCFPENKIRCQDDFFYSKRPVSPLSPPSGILEVSKPSVKAQHAEKYHAPPEKDKDSTQ
QKTQDQKTQPKVEVECVGVSGHLQSLSGSLVSPSKLPLHYRGTVPISDVSHHAEYYMHEA
KRLKHRADAMVDKLGKAVNYVDAALSFMECGKAMEEGPLESKSPHTMYAETVELIRYAMR
LKSHAGPGARQEDKQLAVLCFRCLALLYWQMFRLKKDNALKYSKVLLDYFKGSPKGPHKP
PHWNGAGKGTVPPASICSVNIMGSHTGSSPSSVISIPHRIHQMAANHLNITNSVLYSYEY
WEVADTLAKENKEFFNYLNTLTGPLTLHSSMAHIVQYTRQGLQWIRISANLS
NT seq
3759 nt
NT seq
+upstream
nt +downstream
nt
atgcctacaatttatggaagtaagggaaaacttgcaagtgtttttttcatgcttcagcac
gcatcccaggacatgacccagtcctggccttaccagcagcccccaggggaagggggcact
cagcatttcctgtactcacactcaaaggaggggaagcagcccagttcacgacacagacat
gtgagggatggtgtctctatgaggatgccctcacgtccactcgtggcccctcataaatcc
atgctcgctgatgacctaaaactcagcagtgatgaagacgacaaggatgagggaagtgag
caaacaacttcctgggctgataatgaccgcttgtcaggccagcagcagcaccacacaagc
acacatgtcggaagagtgagacattctagctcagggtcttcaggatcagacccctccagc
gagtgggaaagcagcagccagcgatcacgcagcccgagcccagggacgcacaaccggtgc
gggacaccgacccagcagcggtccctaaattgtagcacagagacggagagtccaccatcc
acgcagtggcagctggacagatggcttgagaaagcccctaaaaatcatcagtcaactgac
cacgacccaggtggaggacagcgacggagtgcaaaatctgactgtggccgaggaccatca
cctggaagatactggagcagagaccctgagtccagacaagattatagtccatgtgaaagt
ccggtcccaagtccaaaatttgactacagccccagaaacagtcctcatcccagcccagaa
tacagtccgtgccccagtccaggaattagccttgtgccaagcccagtgccaagtgtgtgc
ccaagtccaggagacagcttccgagggagtcgaagtcccagccctttactattacaccct
cccagaagccccagtccaagtctctcaaccgctgcagtacctagccaaggtacatatcct
caggtacagcgacctaaacaggaaagtcccaggcatattgcacggccaaactctgcctct
aatccagcacatcgtcccaaagtaaggccatgggtgcctccggaccagagaaaggagttt
agacccaaggactctagatccagagactctcgatccaaagactccagagctggtcctccc
caacaaccccgtcattccgagcacagctcaccaaaaaagtcacacaaagatctcacacac
aagcttgaagccaaaaactctgaatccacaagcaagcaaaggtttaactccccttcaaac
cccatttcaaagcattcatcgaagcaaagaccaagcccaaaaccacaagccaggcactcg
tctacaactgaccatagtattgaacataatcacagaagcaatgaacttacaggagtgtca
atccacagttcacactccaagtcaggccattcgtctcattttaatactttaaagagttct
gaccgtggtccctcgtcaaagtccagggactcatcccaaagcgaagtcaacagtcgatct
agtcacagctcgaagactaaatctttcccagatacaaagcagtccagctctaaacagact
tcccaacacagttccagcccaaagcccaaggtcaaactaggggacaccccagtgtccaga
accaggcattcccaaaaagtcccaaagcctagagagagagagcgagaggtggacagccga
ggtaaggcccagggagcaaccctggtgcagaccggcagggagcagagacaaagaagactg
gcggaggagcaagtaataaggcgtcgctgggttcggagttctgaagaagaggaagaagag
gaagacaggagaaacgaggaaggggaaagagagaggaaacggaggaggaggagggagcag
gaagttgaatggaaagcagtgcagcccaagcaaagacctcacaccaacagccagcatcac
gctcagaaggaatacaacggacacaaccttaaggagcagaggaggaagaagagacggtgg
agcaatgaggacatttcctcaggtcctcatgtgacagacactagcctatctcctccactt
tctccaccttcccctactcctgtcatcaagcccattcgtccatcatcttcctcgtcttca
tcctcctcatcatcctcatcgtcctcgtcatcttcctccgaatcagactctgagttcagt
ccaccacgaaatgttgccaaagtccctgcagattcaacatcgaaccaaaaaacagtgtca
aaaaggaggcatgacaaacagggttcaggcactggtcctcaaccccacgggtcaaattta
ggcactcctgagacagacaaacaaggtcgggggagacacaaactctacacacttgtgcct
ttcggccgaactgaaaagtcccccaccgttgcacatcgaggcctgagaaaacttgttgtg
aggatagacctctcgcttctgggtagagtccccagtacagatgagattacagagagacag
tcctcatcttcagctttgtcatcgggaaagacaaaagaaaagacaccgatgaaacaccag
caccacttggaccaactgcctggagatggcagaagtaaaagaaaagctgaaaatggagat
gctcaaagagagagtaagagaaatcactcccgtgcagataaactaccagtgccagtgcat
aatgagagtgaggaaaccctcaacaagcaaaatggtactgcccttcagaagctacaagag
ataactacatgtttcccagaaaacaaaataagatgccaggatgatttcttttattccaag
aggccagtatccccattgtctcctccatctggcatactggaggtctcaaagccctcggta
aaagctcagcatgcagagaagtaccacgcacctccagaaaaagacaaagattcaacacag
cagaaaacacaggaccagaagacgcagcccaaagtagaggtggagtgtgtcggagtgtca
ggacacctacagtctctttctggatcactggtttctccctcaaagcttcctcttcactac
agagggaccgtacctatcagtgatgtctctcatcatgctgagtactacatgcatgaggcc
aagaggttgaaacatcgagcagacgctatggtggataagttaggaaaagctgtgaattat
gtggatgctgctttgtccttcatggagtgtggtaaagccatggaagagggaccgctggag
tccaagtccccccacaccatgtatgctgaaactgtggagctcataagatacgctatgaga
ctaaagagtcacgccggccctggagccaggcaggaagacaaacaactagctgtactatgt
ttccgctgtcttgctcttctttattggcaaatgttcagacttaaaaaggacaacgctcta
aaatactccaaagtcttgctggactatttcaagggttctccaaaaggacctcacaaaccc
cctcattggaacggtgctggaaagggaactgtacctcctgcctctatttgctctgtcaat
ataatgggatctcacacaggcagctcaccaagcagtgtcatcagcattcctcatcgtatc
caccagatggcagcaaatcacctcaacatcaccaacagtgtcctgtacagttacgagtac
tgggaggtagctgataccctggccaaagaaaataaggaatttttcaactatctgaacaca
ttgactggacccttgactctgcatagcagcatggcccatatcgtccagtacaccaggcaa
gggctgcagtggatccggatcagtgctaatctgtcataa
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