Labeo rohita (rohu): 127171349
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Entry
127171349 CDS
T09007
Symbol
lss
Name
(RefSeq) lanosterol synthase
KO
K01852
lanosterol synthase [EC:
5.4.99.7
]
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh00100
Steroid biosynthesis
lroh01100
Metabolic pathways
Module
lroh_M00101
Cholesterol biosynthesis, FPP => cholesterol
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
127171349 (lss)
Enzymes [BR:
lroh01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.7 lanosterol synthase
127171349 (lss)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SQHop_cyclase_C
SQHop_cyclase_N
Prenyltrans
Motif
Other DBs
NCBI-GeneID:
127171349
NCBI-ProteinID:
XP_050975886
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Position
9:25993706..26005344
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AA seq
735 aa
AA seq
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MTGGTCLRRRGGPYKTEPVTDLSRWRLSNVEGRQTWRYIEEAETVDRKQSFLESHSLGLD
TGEFISAAPAAHTAVEAAMKGMDFYSRLQAEDGHWAGDYGGPLFLLPGLLITCHIAKIPL
PDAWKKEMVRYLRSVQLPDGGWGLHIEDKSTVFGTALNYTTLRILGVDPDDPDMVRARNT
LHSKGGAVGIPSWGKFWLAILNVYSWEGMNTLFPEMWLFPSWVPAHPSTLWCHCRQVYLP
MSYCYAVRLSADEDPLVLSLRQELYVQEYSTIDWPAQRNNVAACDMYTPHSTLLTIAYSI
LNVYEAHHSTTLREKAVKELFDHIKADDRFTKCISIGPISKTINMLVRWYVDGPTSSVFQ
EHVSRIPDYLWLGLDGMKMQGTNGSQLWDTAFAVQAFLEAGAQDIPRFTECLTQAHHFFD
LTQIKENPPEYEKYYRQMNKGGFPFSTRDCGWIVADCTAEGLKSVMLLQEQCGFLKENVP
TERLFDAVNVLLSMRNPDGGFATYETKRGGKLLELLNPSEVFGDIMIDYTYVECTSAVMQ
ALKHFHSVYPKHRAEEIRTTLQQGLDYCRRIQRPDGSWEGSWGVCFTYGVWFGLEAFACM
GHTFQNGSACVEVKSACEFLLSNQMEDGGWGEDFESCEQRCYVQSKNSQIHNTCWALLGL
MAARYPDIRVIQRGIQVLIDKQLPNGDWPQENISGVFNKSCAISYTSYRNVFPVWTLGRF
SRLYPCSPLAGKLKI
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgacagggggaacgtgtttgcggagaaggggaggcccctataagactgagccggtgaca
gatctcagccgctggaggttgagcaatgtggagggcagacagacctggaggtacattgag
gaggcagagactgtggacagaaagcagagcttcctggaatctcactctctgggactggac
acgggtgagttcatctcagcggcccctgccgcacacaccgcagtagaagctgcaatgaag
ggaatggacttctacagccgtctccaggctgaagatggacactgggctggggattatggt
ggaccacttttcttacttccaggtttgctcataacctgtcacattgccaagatccctctg
ccagatgcgtggaagaaggaaatggttcgataccttcgctctgtgcagctgcctgacgga
ggctggggcctgcacattgaagataagtctactgtttttggaacagctttaaattacacc
accttgagaattctgggagttgatcctgatgatccagatatggttcgagcaaggaatact
ttacacagcaaaggtggtgctgtcggcataccctcctggggtaaattctggttggccatc
ctcaacgtatacagctgggaaggaatgaatacgctctttccagagatgtggttgtttccc
tcttgggtgccggcacatccctctactttatggtgccactgtcggcaggtctacctgccc
atgagctactgctatgcggtcaggctgtctgctgatgaagatccgctggtactcagttta
agacaggagctctacgttcaggaatactcgactattgactggccagctcagaggaacaac
gttgcagcctgtgacatgtacacacctcacagcaccttgcttactatcgcttactcgatc
ctgaatgtgtatgaagctcatcacagcactacgctgagagaaaaagcagtgaaggagctt
tttgaccatattaaagcagacgatcgcttcacaaagtgtatcagcattggcccgatttcg
aagacaatcaatatgttggtacgctggtatgtggatggacccacctcgtctgtctttcag
gagcatgtgtcaaggatccctgactatctatggttgggtctggatggtatgaaaatgcag
ggcacaaatggatcacagctatgggacactgcatttgcagtacaggcatttcttgaggca
ggtgctcaggacatccccaggtttacagagtgcctcacacaagcccatcatttctttgat
ctgacccagatcaaagaaaatcctccggaatatgagaaatactatagacaaatgaacaag
ggaggttttcccttcagcacacgggactgtggttggatagttgcggactgtacagcggaa
gggctgaaatctgttatgctgctccaggagcagtgtggttttcttaaagaaaacgttccc
acagaaagactctttgatgctgtcaatgtgctgctgagcatgagaaatccagatggaggg
tttgccacgtatgagaccaaacgtggtggaaaactgctggagctgctgaacccatctgaa
gtgtttggtgatataatgattgactacacgtatgttgagtgcacctcagctgtaatgcag
gcactgaaacactttcacagcgtatatcctaagcacagagcagaagagattaggacaact
cttcagcaggggctggactactgcaggaggattcaaagacctgatggctcatgggaaggg
tcctggggagtctgtttcacatatggagtctggtttggtctggaagcttttgcatgtatg
ggccacactttccaaaatgggtctgcttgtgtggaggtgaaaagcgcttgtgagttcctg
ctgtcgaaccagatggaggatggaggctggggcgaggactttgagtcatgtgagcagcgg
tgctacgttcagagcaagaactcacagatccacaacacctgctgggctttgctggggttg
atggctgccaggtaccctgacatcagagtgattcagcgaggcattcaagttctgattgat
aagcagctgcccaatggagactggccacaggagaacatttctggagtgttcaataaaagc
tgtgccatcagctacacctcttacaggaatgtgtttcctgtgtggacgctgggccgtttc
tcacggctctacccctgcagccctctggctgggaaactcaaaatctga
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