Labeo rohita (rohu): 127171425
Help
Entry
127171425 CDS
T09007
Symbol
sox1b
Name
(RefSeq) transcription factor Sox-1b
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lroh03000
]
127171425 (sox1b)
Transcription factors [BR:
lroh03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
127171425 (sox1b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
127171425
NCBI-ProteinID:
XP_050976040
LinkDB
All DBs
Position
1:complement(19849923..19851798)
Genome browser
AA seq
339 aa
AA seq
DB search
MYSMMMETDLHSPGPQTNTNTGHTGPNGGSKVNQDRVKRPMNAFMVWSRGQRRKMAQENP
KMHNSEISKRLGAEWKVMSEAEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKTKTLLKKDK
YSLAGGLLAGSGGGGGVGLGMGAGVGQRLESPVGHGGNTAASYAHMNGWTNGAYSGQVAA
AAAAAAMMQEAQLAYSQHPGSGAHHHHGHHHHPHNPQPMHRYEMTALQYSPISNSQSYMS
ASPSGYGGISYTQHQNSSVASSGAIGTLSSLVKSEPSVSPPVTAHSRAPCPGDLREMISM
YLPTAEAGDPSVQSRLHAVPQHYQSSTTSVNGTVPLTHI
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgtatagcatgatgatggaaacggacttgcattccccgggaccccagactaacacaaac
acgggccacacgggtcccaacggcggcagcaaagttaaccaagaccgcgtcaagagaccc
atgaacgcgtttatggtgtggtctcggggtcagcgcaggaaaatggctcaggagaaccca
aagatgcacaactcggagatcagcaagcgcctcggagcggagtggaaagtcatgtccgag
gcggaaaagcgacccttcattgacgaggcgaaaagactgcgcgccatgcacatgaaggag
catccggattacaagtaccgaccccggaggaagaccaagaccctgctcaagaaggacaag
tactctttggcgggtggcctgctcgctggatcaggtggcggaggtggcgtggggctggga
atgggagcgggggtcggacagaggttagagagtccggtaggtcacggcggcaacaccgcg
gcgagctacgcgcacatgaacggctggaccaacggcgcgtactccggccaggtggcggcc
gccgcggctgcagccgcgatgatgcaggaggctcagctcgcctacagccagcacccgggc
agcggagcgcatcaccaccacgggcaccaccaccatccacataatccccagcctatgcac
cgctacgaaatgacggctctccagtacagccccatctcaaactctcagagctacatgagc
gcctcgccgtcaggctatgggggaatatcctacacgcaacaccagaactccagcgtggct
tcatctggggccatcggcacgctgagctcgctggtgaaatcggagccgagcgtaagtcct
cccgttactgctcactctcgagccccttgtcccggagacttgcgggagatgataagcatg
tatttaccgacggcggaggcaggggacccgtccgttcagagcagactgcacgctgtaccg
cagcactatcaaagttccacgacgagcgtaaacggaaccgttccactgacacacatatga
DBGET
integrated database retrieval system
