Labeo rohita (rohu): 127171430
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Entry
127171430 CDS
T09007
Symbol
xrcc5
Name
(RefSeq) X-ray repair cross-complementing protein 5 isoform X1
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
127171430 (xrcc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lroh03400
]
127171430 (xrcc5)
DNA repair and recombination proteins [BR:
lroh03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
127171430 (xrcc5)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Ku_N
Ku_PK_bind
Ku_C
VWA_2
VWA
Motif
Other DBs
NCBI-GeneID:
127171430
NCBI-ProteinID:
XP_050976047
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Position
9:complement(34681533..34710612)
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AA seq
744 aa
AA seq
DB search
MTERCEVKARKSYFMYNWKKRQQSALVLCMDVGFSMSNSEPGQEPPFEQAKKVIQKFVQR
QVFAENKDEVGLVLFGTDGTKNRLAEGGQYENITVHRHLMMPDFELLEEIASEVQPGGQQ
ADWLDALVVCMDLLKDETMGKKFERLNIVLLTDLNVQTSEDQLDIIIQNLKKAGITLQFF
LPFPVDGEDRADGRGDGPGPSAGPGRPGKGLNRQQTQGLEMVKQIMTSLEEEEGLEEVYT
FSDALEKLSIFKRIDRRPMAWPCQLTIGSSLTIRIVGYKAVTEEKVKKSWAIVEAQSHQR
DDVKRETVYCLNDDNETEVQKDDTIQGFRYGSDIVPFSKVDEDQMKYKSDGKCFSVLGFT
KQELIHRHQFMGTQVVKVFAPRDDEHAAVALSALIHALDSLKMAAIVRYAYDRRSNPQVG
AAFPCIKEKYECLLYVQLPFMEDLRQFTFPVLENNKKFTPSESQLSAVDALIDSMMLVEK
DEDGESVDILKVKHIPNPQFQRLFQCLHHRVVNPDDPLPPVEPWLKRVLERPQAVSARCQ
APLQDVKTKFPLKVVAKKKEQKTSADVFGSSADEPDVKKVKVDEETEFNLAEIAEGNITS
VGSVNPVRDFCTLVRQKTISFDQACQQLTHRIEQLLGNRSPEYYMKSIACIQAFRDQSVS
TGNAELFNSYMQSLKRSIPDRNLQEFWNLLIQDALTLISKDEVDGSTISKQDANQFLAFE
QKEEEQAAPAQEDTGDVDDLLDMM
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atgacggagaggtgcgaagtgaaagcgcggaaaagctatttcatgtacaactggaagaaa
cgacaacagtcagcattggtgctgtgcatggatgtgggtttctccatgagcaactctgag
cctggccaggaaccccctttcgaacaggccaaaaaagtcattcagaagtttgtccagcgg
caggtgtttgctgaaaataaggatgaggtgggtctggtgctgtttggtaccgacggcact
aagaaccgtctggccgaaggcggccagtatgagaacatcacggttcaccgtcacctcatg
atgcctgattttgagctgctcgaggagattgcgagcgaagtgcaacctggtggtcagcaa
gcagactggcttgatgctctggttgtttgcatggaccttttgaaggatgaaaccatgggg
aagaagtttgagcgtctgaacatcgtcctgctgacggatctgaatgtccagacttcagaa
gaccagctggacattatcattcagaacttgaagaaagctggtatcaccctgcagttcttt
ttgccgttccctgtggatggtgaggacagagcggatgggagaggggatggaccgggaccg
tcagcgggtcctggccgtccaggaaaaggcttaaacagacagcagacacaaggtctggag
atggtcaagcaaatcatgaccagcttagaggaagaggaaggcctggaggaggtgtatacg
tttagtgatgctctggagaagctgtccatcttcaagcgcatcgacaggaggccgatggct
tggccctgtcagctgaccatcggcagctctctgaccatacgcatcgtcggatacaaagct
gtgacggaggagaaggtgaagaagtcttgggccatagtagaagctcagagtcaccagaga
gacgacgtcaagagggaaacggtttactgcctgaatgatgataatgaaactgaagtacag
aaggacgacactatccaaggtttccgttacggaagtgacattgtgccattttctaaggtt
gacgaggaccagatgaaatataagtctgatgggaagtgtttttctgtgcttggcttcact
aaacaggagctgattcatcgtcatcagtttatgggaacccaagttgtcaaagtttttgca
cccagagatgacgagcatgcagcagtggcgctgtccgctttgatccacgccctcgacagt
ctaaagatggcagcgattgtgcgttatgcttacgaccgtcgcagcaaccctcaagtgggc
gccgcttttccctgcataaaggagaaatatgaatgtctgctgtacgtgcagctgcctttt
atggaggatctcagacagtttacattccccgtgttggaaaacaacaagaagttcacaccc
tcagagtctcagctgtcagccgtggatgcgttgatcgactccatgatgctggtggaaaag
gatgaggatggagagagtgtggacatcctcaaagtcaaacacattccaaacccacagttc
cagagacttttccagtgcttgcatcaccgcgttgtgaatcctgatgatcccctgccgccc
gtagagccgtggctgaagagggttctagagcggccccaggccgtgtccgcccgctgccag
gcccctctgcaggacgtcaagaccaagttcccactgaaagtggtggcgaaaaagaaggag
cagaagacgagtgcagacgtgttcggcagcagtgctgacgaaccagatgtgaagaaagtc
aaagtggatgaagaaaccgagtttaacctggccgagattgcagagggaaatatcacatcg
gttggcagcgtcaatccagtcagagatttctgcacgttggttcgacagaagaccatttct
ttcgatcaggcatgccagcagctgacccacaggattgagcagttgctgggcaacaggagc
cccgaatactacatgaagagcattgcctgtatccaggccttcagggatcagtccgtatcg
accggaaacgcagagctgttcaacagctacatgcagtccctcaagaggagcattccagac
aggaatcttcaggaattctggaatctgctcattcaagatgctctgacactgattagcaag
gatgaagtggatggaagcaccatttccaaacaagatgcaaaccagttcctggcgtttgag
cagaaagaggaagagcaggcggctccagcacaggaagacactggagatgtggatgatctg
ctggacatgatgtaa
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