Labeo rohita (rohu): 127171440
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Entry
127171440 CDS
T09007
Symbol
lcmt2
Name
(RefSeq) tRNA wybutosine-synthesizing protein 4
KO
K15451
tRNA wybutosine-synthesizing protein 4 [EC:
2.1.1.290
2.3.1.231
]
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lroh03016
]
127171440 (lcmt2)
Enzymes [BR:
lroh01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.290 tRNAPhe [7-(3-amino-3-carboxypropyl)wyosine37-O]-methyltransferase
127171440 (lcmt2)
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.231 tRNAPhe {7-[3-amino-3-(methoxycarbonyl)propyl]wyosine37-N}-methoxycarbonyltransferase
127171440 (lcmt2)
Transfer RNA biogenesis [BR:
lroh03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
127171440 (lcmt2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_KLHDC2_KLHL20_DRC7
LCM
Kelch_4
Beta-prop_ATRN-LZTR1
Kelch_5
Kelch_1
Kelch_2
Kelch_6
Kelch_3
RAG2
Motif
Other DBs
NCBI-GeneID:
127171440
NCBI-ProteinID:
XP_050976066
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All DBs
Position
9:18836201..18843513
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AA seq
677 aa
AA seq
DB search
MPVNSKREQGKDVAVQGTNDSSVVSKVSAAAQGYFHDDFLKHFVCKVSRRAPLINRGYYV
RWKAVDHCVKQFFHATISCSRRQILSLGAGFDSLYFRLHAEGALGDVTVFEVDFPEVARR
KAALINSNTCLKDALPDWDALSNQQTNAVFIRSGHYNLIGVDVRKEQEVEATLSRAGLQW
DAPTLVLSEVVLTYMETQWSDAVIGWAAKLLPQSMFVMYEQIRPDDPFGRVMQNHFLKLN
STIHALKQYPDTVAQTHRFIQKGWEKCVCLDLNQFYFDLLPEDERQRVSGLEPFDEFEEW
HQKCSHYFILTASKGSVTNQALLTLPKASSIPHMTPQWTERPPLVIQPMYGSPSIEAVGM
ASAVLAPGIILLTGGCGRNGRDTAARVLIKEKDGWKCACVEAHGDKVVSLYQTLTSIPGG
GAVLLGGRTSPLNPTGSVVWVTFDPGNEQSAVQLSFENTVCTGTGPKPRWRHTSTLICYK
DKTFLFVFGGRTEKDPVLGDAHFLCLEDKHWTEMTVVGAVPEARHSHSACPYGGGLVIFG
GLGKGGRPLCDVFYLRPTSSGFCWETKNLHPPPVPRYSHSAHVINEKLVVVGGVWLQADG
VPGVAVINLNTGSCLEIQLDTSSVPWPLMLHSFCSELLDSEGSEMVLIGGGGNCFSFGTH
LNLHPVTVDLRPILCSS
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atgccagtaaacagcaagagagagcaaggaaaagatgttgctgtgcaggggactaatgac
agcagtgtggtcagtaaggtgtcggcagcggcacagggctacttccacgatgatttcctt
aagcattttgtgtgcaaagtgtcaagaagagctccactgattaatagaggttattatgtg
cgctggaaagcagttgatcactgtgtgaagcagtttttccatgccacaatatcctgctcg
aggagacagattctgtcactaggagccgggtttgactcattgtatttccggctgcatgca
gaaggagcccttggagatgtcacagttttcgaggttgactttccagaagtggcccggcgc
aaggctgccttgatcaatagcaatacttgcctgaaggatgcgttgccagattgggatgct
ctctcaaatcagcagactaatgctgtgttcatcagaagtggtcattataatctcattggt
gtggatgtcaggaaggagcaggaggtggaggcgactctgagcagagctggactacagtgg
gacgctcccactcttgtcttgtcagaggttgtgttgacttacatggaaacacaatggtca
gatgctgtgattggctgggctgccaaactactcccacaatctatgtttgtgatgtacgaa
cagatccgcccagatgacccgtttggcagggtcatgcaaaaccacttcctgaagcttaat
tctaccatacatgctctcaaacaatatccagacactgtcgctcagacgcatagattcata
cagaagggctgggaaaaatgtgtctgtctggatttgaaccagttctactttgaccttctt
cctgaagatgagaggcagagagtctcgggactggagccttttgatgaatttgaggagtgg
caccagaaatgttctcattacttcatccttacagcctccaaaggctctgtgaccaatcaa
gcccttctcactctaccaaaggcatcttcgattcctcatatgactcctcaatggactgag
cgccctcccctggtcattcagcccatgtatggctctccgagtatagaggctgttggaatg
gcttctgctgtcctggcacctggaatcatcctactcactggaggctgtgggagaaacgga
agagacacagcagcgagggtcctgatcaaagagaaggatggctggaaatgtgcctgtgtg
gaggctcacggggataaagtggttagtctttatcagacgttgacttctatccctggaggt
ggagctgtcctcctcggtggcaggacttctccactcaatccaacaggcagtgttgtgtgg
gtgacctttgaccctggcaatgagcaaagtgctgtacagctgtcctttgagaacacggtt
tgtaccgggactggtccaaagccacgatggcgacacacatcaaccttgatatgttataaa
gataagacttttctatttgtgtttggaggacgtacagagaaggatccagttttaggtgat
gcacatttcctatgtttggaggacaaacactggactgagatgacagttgttggtgccgta
ccagaagcccgtcattcccattctgcttgtccctatggagggggacttgtgatatttgga
ggtttagggaaaggaggcagacctctctgtgatgttttctacctgagacccacatcatca
ggtttctgctgggagacaaagaatttacatccacccccagtacccagatattctcactca
gcccacgtaataaatgagaagttggttgtggttggtggagtttggcttcaggctgatgga
gtaccaggagttgctgtaataaatctgaacactgggagctgtttggagatccagttggat
acctcatctgtgccttggcctctgatgctgcattcattctgctctgagctgctggactct
gaggggtcagagatggtgctcattggtggaggtggaaactgtttctcatttgggactcat
ctcaatctccaccctgtaacagtggatttaagaccaatactttgctcttcataa
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