Labeo rohita (rohu): 127171535
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Entry
127171535 CDS
T09007
Symbol
usp25
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 25 isoform X1
KO
K11849
ubiquitin carboxyl-terminal hydrolase 25 [EC:
3.4.19.12
]
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lroh01002
]
127171535 (usp25)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lroh04121
]
127171535 (usp25)
Enzymes [BR:
lroh01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
127171535 (usp25)
Peptidases and inhibitors [BR:
lroh01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
127171535 (usp25)
Ubiquitin system [BR:
lroh04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
127171535 (usp25)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
USP_UIM_N
UBA_8
UIM
UBA_4
UIM_2
PhnI
BAT2_N
Motif
Other DBs
NCBI-GeneID:
127171535
NCBI-ProteinID:
XP_050976199
LinkDB
All DBs
Position
10:complement(2647581..2679296)
Genome browser
AA seq
1167 aa
AA seq
DB search
MTVEQNVLQQHSQKHQQTLLNQLREVTGTTDVQLLQQALQVSNGDLAEAVAFLTEKNAKV
PQQDEATYYQTAQITNDRYISVGSQADTNVIDLTGDDKDDLQRAIALSLEESNRAFRETG
ITDEEQAISRVLEASIAENKASLKRTHTEVWSDSPNPHDRKRQENCPVGLKNVGNTCWFS
AVIQSLFNLLEFQRLVLHYSPPARMQDLPRNQKEHRNLPFMQELRRLFSLLVGSKRKYVD
PSRAVEILKDAFKSSESQQQDVSEFTHKLLDWLEDAFQIKAEEDREGEKPKNPMVDLFYG
RFLAVGVLEGKKFENTEMFGQYPLQVNGFKDLHECLEAAMIEGEIESLHSAENSAKSGQE
HWFTELPPVLTFELSRFEFNQTLGRPEKIHNKLEFPAMLYMDRYMDRNRDITRIKREEIR
RLKEHLTVLQQRLERYLSYGSGPKRFPLADVLQYAMEFASSKPVCTSPVEDIDTTAPPGG
TTAQLPPPASTGEQPDVSVPPEGSGSGSQAQQQQQQQQQQQQQQQQQRVSIHKPFTQSRV
PPDLPMHPAPRHITEEELRVLEGCLHRWRSEVENDTRDLQASISRIHRTIELMYSDKSMM
QVPYRLHAVLVHEGQANAGHYWAYIFDPHQQRWMKYNDISVTKSSWEELVRDSFGGYRNA
SAYCLMYIDDKKPFLIAEEFDKETGQMLSGLDKLPPDLKEFVEADNKLFEREMEEWDALQ
ARKLQQEKLALAAASVAAQPMSTEPCPPDNTAAPQHDPEYMEQQSPTGDSKHLQEDTERA
ISKAAAEHDEKSPEALLNTSQSPHPDSEVTSDPCPPLDPEQDDSASSPPAPQRVVEVAIP
NVGTFVIQSKEGGYDDEAMMTPNMQGVIMAIGKSRSVYDKCGPEAAFFKAMKVEYTRLLR
FAQEDTPPERDYRLQHVIVYFIHNQAPKKIVERTLLMQFADRNLGFDERCKSIMKVARAK
LELIKPDEVNMEEYEMWHQDYRRFRDTTVFLLIGLELFLKKSYVEALMYLIYAYQYNKEL
LAKGLYRGHNEELIAYYRRECLLKLNEHAAALFETGEEAEVNTGLSIMNELVVACIPLLL
VDEMEEKDMVAVEDMRNRWCSYLGQEMEPNLQEKLTDFLPKLLDCSTEIKSFLDPPKLPS
YSTLELCERYGRVMTSLTLSRTPADGR
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
atgacggtggagcagaatgtcctgcagcagcactctcagaagcaccagcagacattactg
aaccagctgagggaagttactggaactactgatgttcagctcttacagcaggcactgcag
gtcagtaatggtgacctagccgaggcagtggcctttctcaccgagaagaacgccaaggtc
ccgcagcaagatgaagccacctattaccagacggcccaaatcaccaatgatagatacatc
agtgtgggcagccaggctgacacaaatgtgattgatctcactggagatgataaagatgac
cttcagcgggccatcgctctcagtctggaggagtccaaccgggccttcagggagacgggc
atcactgatgaagagcaggctatcagcagagtcctggaggccagcatcgccgagaacaag
gctagcctaaagcgcacacacacagaagtatggagcgattcgcccaaccctcacgacagg
aagcggcaggagaactgtcccgttgggctgaagaacgtgggaaacacgtgctggttcagc
gcagttatacagtctctgtttaacctgctggagttccagaggctggtgttgcattattcc
ccccctgcacggatgcaggacctgccccgtaatcagaaggagcacaggaacctacctttc
atgcaggagctgagacgcctcttctctttgttggtgggttccaagcgaaagtatgtggac
ccgtccagggctgtggagatcctcaaggatgcctttaagtccagtgaatctcagcagcag
gatgtgagtgagttcacccataaactcttggactggctagaggacgcctttcagataaag
gcagaggaggacagagagggagagaagccgaagaacccgatggttgacctgttttatggc
cgtttcctggctgtgggtgtcttggaaggaaagaaatttgagaacactgagatgtttgga
cagtatcctctccaggtgaacggcttcaaagatctgcacgagtgtttagaggcagccatg
atagagggagagatcgagtctttgcattctgccgagaactccgccaaatcaggccaagag
cactggttcacagaacttccaccagttttgacctttgaactgtcgaggtttgagtttaat
caaaccttaggccgaccggagaagattcacaacaagctagagtttcccgccatgctgtac
atggacaggtacatggacaggaacagagacatcacacggataaaacgagaggagatcaga
agactaaaggagcacctgactgttctccaacagagactggagaggtatctgagctatggc
tcagggcccaagcggtttcctctggccgatgttctccagtatgccatggagtttgcatcc
agcaagcctgtgtgcacatcacctgtggaggatatcgatacaactgctccacctggtggc
acgactgcacagctgccacctccagcaagcacaggggaacagccggatgtatctgtccca
cccgagggctctggctctggttcacaggcccagcagcagcaacaacagcagcagcagcag
cagcaacaacaacagcagcaacgggtttcaatccataaaccgttcactcagtctcgtgtt
ccgccggatctaccgatgcaccccgccccgcgacacatcaccgaggaggagctgcgggtg
ctggagggctgtctacaccgctggaggagtgaggtggagaacgacaccagggatctgcaa
gccagtatatctagaattcacagaaccatcgagcttatgtattctgacaagtccatgatg
caggtgccgtaccggctgcatgctgttttggtgcacgagggtcaggctaacgcaggtcac
tactgggcgtacatcttcgacccacatcaacagcgatggatgaaatacaatgacatttca
gtgacaaagtcatcctgggaggaactggtgcgagactcgtttggtggatatcgcaatgcc
agcgcgtactgcctcatgtacattgatgataaaaaacccttccttattgcagaggagttt
gataaagagacagggcagatgctcagcggtttggacaagctccctcctgatctaaaggag
tttgtggaggcagataacaagctctttgagagggagatggaggagtgggacgctctacaa
gcacgcaaactccagcaggagaaactggcattggccgccgccagtgtggccgcccagccc
atgagcactgaaccctgcccaccagacaacacagcagcccctcagcatgacccagagtac
atggagcagcagtcacccaccggagactccaagcacctgcaggaggacacggagagagcc
atcagcaaagctgcggctgagcatgatgagaagagtccagaggccctgctcaacacatct
caatcaccacatcccgacagcgaggtgacctctgacccctgtcctccccttgaccctgag
caggacgactccgcctcctctccgcccgcacctcagcgggtggtggaggtggccattcct
aatgtaggaaccttcgtcattcagtcgaaggagggaggttatgatgatgaggcgatgatg
accccaaacatgcagggtgtcataatggccattggcaaatccaggagtgtttatgacaag
tgtgggcctgaagcagcgttcttcaaggcgatgaaagtagagtacactcgtttactgagg
ttcgctcaggaggacacaccccccgagagggattaccgactgcagcacgtcattgtttac
ttcattcacaaccaggcacccaaaaagattgtggagagaactcttctcatgcagtttgcc
gacagaaaccttggctttgatgagaggtgtaagagcatcatgaaggtggcacgtgctaaa
ctggagctcattaagcctgacgaggtgaacatggaggaatacgagatgtggcatcaggat
taccggagattccgtgacacaacagtgttcctgttgatcggcctggaattattcttaaag
aaaagttacgtggaagcattgatgtacctgatctatgcctatcagtacaacaaggagctc
ctggcaaaagggctgtacagaggccacaatgaggaactgatcgcctattaccgcagagag
tgcctcctaaagttaaacgaacacgcggctgccctctttgagacaggcgaggaggctgag
gtgaacacgggtctgagcatcatgaatgagctggtggtggcctgtattccactgctgctt
gtggatgaaatggaggagaaagacatggtagccgtcgaagacatgagaaaccgatggtgc
tcatacctgggacaggaaatggagcctaatctccaagagaagctgaccgacttcctgccc
aagctactcgactgctcaaccgagattaaaagctttcttgaccctcccaaactaccttca
tactccacgctggagctgtgcgagcgttacggccgggtcatgacgtcactcaccctaagt
cgaaccccggcagacggcagatga
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integrated database retrieval system
