Labeo rohita (rohu): 127171555
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Entry
127171555 CDS
T09007
Symbol
adamts6
Name
(RefSeq) A disintegrin and metalloproteinase with thrombospondin motifs 6
KO
K08621
a disintegrin and metalloproteinase with thrombospondin motifs 6 [EC:3.4.24.-]
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lroh01002
]
127171555 (adamts6)
Peptidases and inhibitors [BR:
lroh01002
]
Metallo peptidases
Family M12: astacin/adamalysin family
127171555 (adamts6)
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Gene cluster
GFIT
Motif
Pfam:
TSP1_ADAMTS
ADAMTS_spacer1
Pep_M12B_propep
Reprolysin
TSP_1
ADAMTS_CR_2
Reprolysin_5
ADAMTS_CR_3
Reprolysin_3
TSP1_spondin
Reprolysin_2
PLAC
Reprolysin_4
TSP1_CCN
DAGK_cat
Peptidase_M57
Peptidase_M66
Motif
Other DBs
NCBI-GeneID:
127171555
NCBI-ProteinID:
XP_050976232
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Position
10:17099508..17200680
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AA seq
1116 aa
AA seq
DB search
MEIFWKTLTWIFSLVLAAAEAQILSYNSQAEFLSTLEHYQLTVPVRVNERGQFMSYTVKH
YRPGRRRRGLDQAELDHTETRLFYKLSAYGKHFHLNLTLNPNLVSKHFTVEYWGKDGLDW
QHSAVDNCHYVGYLLDQYSTTKVALSNCKGLHGVITTEDEQYLIEPLKNISRNFSDVNHE
GQPHVIYKKTSIPSLQKPSEEFSCGVSDLTINRTPSYDTNPGTNSPYPVLDSDSSTSGHR
QRRSVSSERFVETLVVADKMMVGYHGRKDIEHYILSVMNIVAKLYRDASLGNVVNIIVTR
LIVLTEDQPNLEINHHADKSLDSFCKWQKSILSHQGDGNSIPENGIAHHDNAVLITRYDI
CTYKNKPCGTLGLASVAGMCEPERSCSINEDIGLGSAFTIAHEIGHNFGMNHDGIGNSCG
TKGHETAKLMAAHITANTNPFSWSACSKDYITSFLDSGRGTCLDNEPQKRDFLYPTVAPG
QVYDADEQCRFQYGASSRQCKYGEVCRELWCLSKSNRCVTNSIPAAEGTLCQTNTIEKGW
CYQGECVAFGTWPQSVDGSWGPWTTWGECSRTCGGGVSSSMRHCDSPAPTGGGKYCLGER
KRYRSCNTDACPAGSCDFREKQCADFDSMPFRGKYYNWKPYTGGGVKPCALNCLAEGYNF
YTERSPAVIDGTRCQADSLDICINGECKHVGCDNILGSDAKEDRCRVCGGDGSTCEVTEG
LFNDSLPRGGYMEVVQIPKGSVHIEIREVAVSKNYIALKSEGDDYYINGAWTIDWPRKFD
IAGTAFHYKRPTDEPESLEALGATTENLVVMVLLQEQNLGINYKFNVPIQRTGSGDNEVG
FSWHHLPWSECSATCAGGSQKQEVVCKRLDDGSVVQNSYCDPDGKPPGNQRPCNTEPCPP
EWFIGDWSECGKTCDGGIRTRTVLCIRKIGPAEEETLEDSHCLTHRPIEQESCNNQSCPP
QWVTLDWSECTPKCGPGFKHRIVLCKSSDLTKTFPPALCSDHNKPPVRIRCSLGRCPPPR
WIPGEWGQCSAQCGLGQQMRMVQCLSYTGQPSTECPESLRPNTMQQCESKCDATPISGGD
ECKDVNKVAYCPLVLKFKFCSRAYFRQMCCKTCQGH
NT seq
3351 nt
NT seq
+upstream
nt +downstream
nt
atggaaattttttggaagacgctgacttggatatttagcctggtcttggccgctgctgaa
gctcagatcctttcatataactctcaagcggaattcctgtccacgctggagcactatcaa
ctaacagtaccggtgcgggtgaatgagaggggccagttcatgagttacactgtgaagcat
tacaggcccggtcggcggcgacgtgggctggaccaggctgagctggaccacactgagacc
aggcttttttacaaactctcagcctacggcaagcactttcacctgaacctgacactcaac
cccaacctggtttctaaacatttcacagtagagtactggggtaaagacggactagactgg
cagcattcggcggtcgataactgccactatgttggatacctactggatcaatatagcact
acaaaagtggcattgagcaactgcaaaggcttgcatggtgtcataaccacagaggacgag
caatatttaatagagccattaaaaaacatatccagaaatttcagtgatgtcaaccacgaa
ggacaaccacatgttatttataaaaagacttccattccttctctgcaaaagccaagcgag
gagttcagctgtggtgtttcagacctcacaataaacaggacacccagctacgacacgaat
cctggaacaaactcaccttacccggtcctggacagcgacagctcgacgagtggccaccgc
cagcggcgttctgtcagttctgaacgctttgtggagaccctcgttgtggcggacaaaatg
atggtcggctaccacggtcgcaaagacatcgagcactacatcttgtccgtgatgaatatt
gttgccaaactttaccgggatgccagtcttggaaacgttgtgaacattattgtaacccga
ctaattgttctgacagaagatcagcccaacttggagataaaccaccatgcagacaaatct
ctagacagcttctgtaaatggcagaaatccattctttctcatcagggagatggaaacagt
atcccagagaatgggatcgcccatcacgacaatgctgttctcattacaaggtatgacatc
tgtacctataagaacaaaccctgcggtactcttggtttggcgtccgtagctggaatgtgt
gagccagagaggagctgtagtattaatgaagatataggccttggttcagccttcactatt
gcacatgagatcggacacaatttcggcatgaaccacgatgggatcgggaactcctgcggg
accaaaggtcacgagacagccaagctgatggccgcccatatcacagccaacaccaacccc
ttctcctggtcggcctgcagcaaggactatatcaccagctttttggactcaggtcgggga
acgtgtctggacaatgagcctcagaaacgagacttcctgtaccccactgtggctccaggg
caggtgtacgatgcagatgagcagtgtcgtttccagtacggtgcctcctcccgtcagtgc
aaatatggggaagtgtgtagagagctctggtgccttagcaaaagtaaccgctgtgtcacc
aacagtatccccgccgcagaaggaaccctgtgccagaccaacaccattgaaaaggggtgg
tgctatcagggtgaatgtgtggcatttgggacatggccgcaaagtgtggacggaagctgg
ggaccctggaccacctggggcgagtgcagtcgtacctgcggtggcggcgtctcctcatcc
atgcgacactgtgacagcccagcgccgacaggtggagggaagtactgtctcggagagagg
aagcgctacagatcgtgtaacactgacgcttgtccagcaggatcatgtgactttagggag
aagcagtgtgccgatttcgacagcatgcctttccgtgggaagtactacaactggaagccg
tacactggaggtggagtgaaaccgtgtgcgttgaactgtctggctgagggttacaacttc
tacaccgagcgttcgcccgctgtcatcgacggcacgcgctgccaggccgactcgctggac
atatgcatcaacggagagtgcaagcatgttggctgtgataacatcctgggctcggatgcc
aaagaggacagatgccgtgtgtgtggtggggacggcagtacgtgtgaggtcactgaagga
ctgttcaacgattcgctgcccagaggaggttacatggaggtcgtccagataccaaaagga
tcggttcatattgaaatcagggaagtggccgtgtcaaagaactacatcgctttgaaatcg
gagggggatgactattacatcaacggagcctggaccatcgactggccccgcaaatttgac
attgcaggaacagccttccactacaagaggccgactgatgaacccgagtcgctagaagct
ctaggggccaccactgaaaatttagtggttatggtgctattacaggaacagaacctgggc
atcaactacaagttcaatgttccaatccagcgtacaggaagtggagacaatgaagtgggc
ttctcttggcaccatctgccctggtctgagtgctctgcaacttgcgcaggaggctcgcag
aagcaggaggtggtgtgtaaaagactggatgacggttcggtggttcaaaacagctactgt
gacccggatggcaaaccgccaggaaaccagcgaccttgcaacaccgagccttgccctcca
gagtggtttattggtgactggtcagaatgtggaaaaacctgtgacggaggcatccgaaca
cgtactgttttgtgtatccgtaaaatcggacccgctgaagaggagaccctggaggacagc
cactgcctgacccatcggccaatagaacaagagtcctgtaacaatcagtcctgtccacca
cagtgggtgacgctggactggtctgagtgtaccccaaagtgtggccctggcttcaagcac
cgcattgttctatgtaaaagtagcgacctgaccaaaaccttcccgccagccctctgttcc
gaccacaacaaacctccagtccgtattcgctgcagccttggtcgctgtccgccgccacgc
tggatccctggagaatggggacagtgctctgctcagtgtggactagggcagcagatgcgg
atggttcagtgtctgtcgtatacgggacagccctccaccgaatgtccagagtcactacgg
cccaacaccatgcagcagtgtgaaagcaagtgtgacgctacacccatctccggtggcgac
gagtgcaaagacgtaaataaggtggcatattgcccattggtgctgaagttcaagttctgc
agccgtgcgtacttcaggcagatgtgctgcaagacgtgccaaggacactga
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