Labeo rohita (rohu): 127171556
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Entry
127171556 CDS
T09007
Symbol
ppwd1
Name
(RefSeq) LOW QUALITY PROTEIN: peptidylprolyl isomerase domain and WD repeat-containing protein 1
KO
K12736
peptidylprolyl isomerase domain and WD repeat-containing protein 1 [EC:
5.2.1.8
]
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lroh03041
]
127171556 (ppwd1)
03110 Chaperones and folding catalysts [BR:
lroh03110
]
127171556 (ppwd1)
Enzymes [BR:
lroh01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
127171556 (ppwd1)
Spliceosome [BR:
lroh03041
]
Complex C
Other components
PPlases
127171556 (ppwd1)
Chaperones and folding catalysts [BR:
lroh03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
127171556 (ppwd1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pro_isomerase
Beta-prop_WDR5
WD40_Prp19
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40
Beta-prop_IFT122_1st
WDR55
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR3_2nd
Beta-prop_EML
WD40_CDC20-Fz
Beta-prop_EML_2
EIF3I
Beta-prop_WDR36-Utp21_2nd
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
Beta-prop_NOL10_N
WD40_MABP1-WDR62_2nd
Beta-prop_WDR19_2nd
NBCH_WD40
CFAP251_N
Beta-prop_Vps41
WD40_Gbeta
PEP5_VPS11_N
Motif
Other DBs
NCBI-GeneID:
127171556
NCBI-ProteinID:
XP_050976234
LinkDB
All DBs
Position
10:complement(17085800..17095678)
Genome browser
AA seq
622 aa
AA seq
DB search
MASDVSRDGSENKRKLDEDEDEGGWVGPLPSEATQTKKKKVLEFERFYLDNLPSASMYER
SYMHRDVITHIVCSKTDFIITASQDGHVKFWKKKEDEGVEFVKHFRSHLGVIECISVSAE
GALFCSVGDDQAMKVFDVVNFDMINMLKLGFHPGQCEWIYNPGDAISTVACSEKSTGKIF
VYDGRGSNQPLHTFEKMHTTPLSQIRLNPKYRVIVSADKAGMLEYWTGLPSEFKFPRQVE
WEFKTDTDLYEFAKCKTYPTSLAFSQDGKRMATIATDRKVRIFRFLTGKLMRVFDESLTM
FTELQQMRQQLPDMEFGRRMAVERELEKVDGIRLTNIIFDETGHFVLYGTMLGIKVINVE
TNRCVRILGKQENIRVVQLSLFQGVAKAMQAAPTIEMKASDNPALQSSDPDPTIFCTAFK
KNRFYMFTKREPEDTKSADSDRDIFNEKPSKEEVMAATQAEGPKRVSDSAIIHTTMGDIH
IKLFPVECPKTVENFCVHSRNSYYNGHIFHRVIKGFMIQTGDPTGTGMGGESIWGGEFED
EFHATLRHDRPYTLSMANAGPGTNGSQFFITVVPTPWLDNKHTVFGRTTKGMEVVQRISN
LKVNPKTDKPYEDISIINITVK
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccgacgtgagccgtgatggttctgaaaataaacgcaaactagacgaagatgag
gatgaaggcggatgggtcgggccgctgcccagtgaagccacacaaacgaaaaagaagaaa
gttcttgaatttgaaagattctacctggacaatttaccctctgcctccatgtatgaaaga
agttacatgcacagggatgttataacacacattgtttgcagcaaaacagattttatcata
acagcgagtcaagatgggcatgtgaaattctggaagaagaaggaggatgaaggagtagag
tttgtcaagcactttcgcagccatttgggtgtgattgagtgtatctccgttagtgcggag
ggagcgcttttctgctctgtgggcgatgatcaggccatgaaagtttttgatgtcgtcaac
tttgacatgatcaacatgctcaaacttggcttccatccaggccagtgtgaatggatctat
aatccaggagacgccatctccactgtagcctgttctgagaaatcaactgggaagattttt
gtgtacgatggacgtggaagtaatcagccactgcacacatttgaaaagatgcacaccacg
ccactgtctcagatccgcctcaatcccaaatatcgcgtaatagtgtcggctgataaagca
ggaatgttggaatactggacggggctcccgagcgaattcaaatttccacggcaggtggag
tgggagttcaagacagacacggacttgtatgagtttgccaaatgcaaaacgtatcccacc
agcctggcgttctcccaagatggcaagagaatggccactatcgccactgatcgcaaagtc
aggattttccgtttcctgactgggaagctgatgagggtgtttgacgaatcattaactatg
ttcacggagcttcagcagatgaggcagcagttgcctgatatggagtttggacgcagaatg
gcggtggagcgagagctggagaaggtggacggcatccgactgaccaacatcatcttcgat
gagaccggacactttgtgctttacggcaccatgctgggaattaaagtcataaatgtggaa
actaacaggtgtgtgcggatcctgggcaaacaagagaacatccgtgtggtgcagctgagt
ctgtttcagggagttgcgaaggccatgcaggccgcaccaaccattgagatgaaggcgtcc
gacaacccagctctgcagagctctgatccagaccccaccatcttctgcaccgccttcaag
aagaaccgcttttacatgttcacaaagagagagccggaagacaccaagagtgccgactct
gaccgtgacatctttaatgagaagccgtctaaagaggaagtgatggcagccacacaggca
gaagggccgaaaagagtgtccgacagcgccatcattcacaccacaatgggcgacatccat
ataaagctctttcctgtggaatgccctaaaactgtggagaacttctgcgtccacagcagg
aacagttattataacggccacatatttcatcgtgtcatcaagggattcatgatccagacc
ggagatccgacgggcacagggatgggtggagaaagcatctggggtggagaatttgaggac
gagtttcatgccacactgaggcacgacagaccctacactctcagtatggccaatgcaggc
ccgggaaccaacggatcgcagttttttatcactgtcgtcccaactccctggctggacaac
aagcacacagtctttgggaggaccactaaaggtatggaggtggtccagaggatctccaac
ttaaaagtcaaccccaaaaccgacaaaccgtatgaagacatcagcatcataaacatcacc
gtcaaatag
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