Labeo rohita (rohu): 127171557
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Entry
127171557 CDS
T09007
Symbol
trim23
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM23 isoform X1
KO
K07963
tripartite motif-containing protein 23 [EC:
2.3.2.27
]
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lroh04121
]
127171557 (trim23)
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
lroh04031
]
127171557 (trim23)
Enzymes [BR:
lroh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127171557 (trim23)
Ubiquitin system [BR:
lroh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
127171557 (trim23)
GTP-binding proteins [BR:
lroh04031
]
Small (monomeric) G-proteins
Arf/Sar Family
Others
127171557 (trim23)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Arf
Roc
Ras
SRPRB
G-alpha
zf-RING_UBOX
zf-B_box
zf-RING_5
Gtr1_RagA
zf-RING_2
MMR_HSR1
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
127171557
NCBI-ProteinID:
XP_050976236
LinkDB
All DBs
Position
10:17075146..17083626
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AA seq
579 aa
AA seq
DB search
MAAAVGVNKQASAASMEPCVRHGRGTAANAVKVLECGVCEDVFSLQGDKVPRLLLCGHTV
CHDCLTRLPLHGRAVRCPFDRQVTELGDSGVWGLKKNFALLELLERLQNGASNQSGMSED
ALREMGECIIRCDEDETHTASMYCTVCATHLCAECSQLTHSTRTLAKHRRVPLADKPHEK
MLCPQHQVHAIEFVCLEDGCQPGPLMCCVCKEYGKHQGHKHAVLEAEANQIRASILDMAH
CIRTFTEEVSEYSRKLVGIVQQIEGGEQIVEDSMGMAHTEHVPGTAESARSCVRAYFADL
HETLCRQEEMALSVVDAHVRERLIWLRQQQEDMTILLSQVSTACLHCEKTLQQDDCRVVL
AKQEINRLLETLQKQQQQFTELADHIQLDAGIPVTFTKDNRVHIGPKMEIRVVTLGLDGA
GKTTILFKLKQDEFMQPIPTIGFNVETVEYKNLKFTIWDVGGKHKLRPLWKHYYLNTQAV
VFVIDSCHRDRLMESHSELAKLLTEKELRDALLLIFANKQDVPGAVSVEEMTELLSLHKL
CCGRSWHIQGCDARSGMGLHEGLDWLSRQLVAAGVLDVA
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atggccgctgctgtcggtgtaaataaacaggcgagcgcagcatcgatggagccgtgtgtg
agacatggtcgtggtacagctgccaatgcggtgaaggtgttggagtgcggtgtgtgcgag
gatgtgttttcacttcaaggcgacaaggtgccacggctgctgctatgcggccatacggtg
tgtcacgactgcttgacccgtttgcctcttcacggcagggcagttcgctgcccctttgac
agacaggtcactgagctgggggactcgggtgtgtggggcctgaagaagaactttgccctg
ctagaattgcttgaacggctgcagaatggggccagcaatcagtcaggcatgtcagaggat
gcgcttcgtgagatgggagagtgcataatccgctgtgatgaggatgagactcacactgcg
tccatgtactgcacggtttgtgccacccacctgtgtgccgagtgctcccagctcacccac
tccacccgaacactggccaaacaccggcgtgtgccgctggcagacaagccccatgagaag
atgctctgtccacagcaccaggtgcacgccattgagtttgtctgcctggaagacggctgc
cagcctgggccgctcatgtgctgcgtgtgcaaggaatacgggaaacatcaagggcataag
catgctgtactagaggctgaagccaaccagatccgagcatccatcctggatatggcacac
tgcatccgtacattcacagaggaagtgtcggagtactccagaaaactagtgggcatcgtg
cagcagatcgaaggaggagagcagatcgtggaggatagcatgggcatggctcacactgaa
catgtcccaggaacagcagagagtgcccgatcttgcgtgcgtgcctattttgcggatcta
cacgagactctgtgccgtcaagaggagatggctctgagcgtggtggacgcacacgtccga
gagaggctgatctggcttcgacagcagcaggaggacatgaccatactgttgtcacaggtg
tccactgcctgtctgcactgcgagaaaacactgcagcaggatgattgcagggtggttttg
gcgaaacaggagatcaaccgactactagagacactgcagaaacagcagcagcagtttaca
gaactggccgaccacattcaactggatgcaggcatccctgttactttcactaaggacaac
cgcgtgcacattggtccaaagatggagatccgggttgtgactttgggcttagatggagct
ggcaaaactactattctcttcaaactgaagcaagatgagtttatgcagcccataccgact
ataggttttaatgtagaaactgttgaatacaaaaacctgaaatttaccatttgggatgtg
ggtggcaagcataaactccgtccactgtggaaacactactatctgaacacacaagcggtg
gtgtttgtgattgacagctgtcacagagacaggctgatggagtctcacagtgaactggcc
aaactgctgacagagaaagagctcagagatgctctgctgctcatctttgccaacaaacaa
gacgttcctggtgcagtgtctgtggaggagatgacggagctcctgagcttacacaaactg
tgctgcggccgcagctggcacatccagggctgtgacgcccgcagcggcatgggtctacat
gaggggttagactggctctcacgccagctggtggctgcaggagttctggatgtggcctga
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