Labeo rohita (rohu): 127171725
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Entry
127171725 CDS
T09007
Symbol
sec31a
Name
(RefSeq) LOW QUALITY PROTEIN: protein transport protein Sec31A
KO
K14005
protein transport protein SEC31
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
127171725 (sec31a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lroh04131
]
127171725 (sec31a)
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
lroh02044
]
127171725 (sec31a)
Membrane trafficking [BR:
lroh04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
127171725 (sec31a)
Secretion system [BR:
lroh02044
]
Sec (secretion) system
Eukaryotic Sec-SRP protein
127171725 (sec31a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_RIG_2nd
WD40
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
WDR55
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_DCAF12
TPR_Sec16
Beta-prop_WDR35_TULP_N
WDR90_beta-prop_4th
Beta-prop_HPS5
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
127171725
NCBI-ProteinID:
XP_050976494
LinkDB
All DBs
Position
10:complement(22882960..22915839)
Genome browser
AA seq
1560 aa
AA seq
DB search
MKLKEINRTAIQAWSPAQQHPIYLAAGTSAQQLDATFSTNASLEIFELDLADPSLAMKSC
GSFSSPHRYHKLVWGPHGIEDQSLPSGLLIAGGENGNIILYDASKIIAGDSEVIISQSEK
HTGPVRALDVNSFQTNLVASGGNESEIYIWDLNSLSSPMTPGPKTQPLEDISCVAWNKQV
QHILASASPSGKASVWDLRKNDLIIKVSDHSNRMHCSGLSWNPEVATQLVLASEDDRMPV
IQMWDLRFATSPLKVLESHTRGVLAIAWSEADPELLLSCGKDNRILCWNPNTAEVLYELP
TSTQWCFDIQWCPRNPAVLSAAAFDGHISIYSVMGGSNDNTITLQAEQLSSSFGNMDPFG
TGKTLPPLQLPQTVTTQSTVTPLKKPPKWIRRPVGASFAFGGKLVTLDNIKPAAQQPQQT
AAHVVHISQVVTETDFLDRSNQLQATLTAGNFLEYCQTKIEAAQSEFEKTVWSFLKVNFE
EDARGKYLDLLGYKKEELALKIASALERNCKSDEADVLSLIPHHHPAPVSNRVPDPDSKP
ELVLETKPTGVPAHPQLEPKNPSNLELNLHSVHEPLLELTTQKSQSQPSVDFTPPVDLTT
FFDPTPPVDLTYSFVQTPPVDIAFPADITSQVDSSGHMILTPQVKSESVQLFAPSTCHLG
SSDLLLPAESTAAVVPEESLPQPPVEFQQPVPLKNQASSAMHSEPVLPLPAGPSESVQEG
TVDLQQPESYVMPPCSSQPLATLGLSPDILPREAMCLQALADSQPPAPESDLTTQHPVSD
LLNTSDCQPEEVSGSGDPNKSRAKEETTLDEVEKKSPVEEEAEPPATETSDLDEIPFEDE
EPAAEETSNTDITPAPTSDTVNLKVSQDIDGLITQALLTGDYEAAVNLCLHDNRMADGII
LAIAGGPELLAKTQKKYFSKTQSKISKLISAVVMKDWLDILETCDLQNWKEALAAVMTYA
KPEEFSSLCGLLGSRLEAAEEAALQAQACLCYICAGTVEQLVAYWAKAQDSCSPLSLQEL
VEKVVVLQRAVVKAQGGVPPDMGALLAEKMNQYASLLASQGSLQTAISYLPTNTQQVAVQ
QLRDRLSRALGQQQQXRQPGAVTGMQNMRQTLPAAVPAQTYAQPQPPQVPAQPAAPPQYY
QQGRSATTVTSWSNQTPTALPSVPRPLVPAADPQVESTPPAFGLQAPASGSVPASNPFMY
SQQYQNYHPVQQFTPAAGTPGIYQPLSYSSSTASPLPPPLSSSSSAAAVYPPQFMHPASS
QPAVISGPPQGGQPFSSPALSSGMSFQHGGPGSPTAYLPPPVARAPGTQNDPALIPASQR
TGGLNQDFAWCLEGPQNGWNDPPTLNRAPKKKKMPEHFTPPAPITAPIMAPLGEPQVPAP
QTMQTLQPQQQVPDQPVGPATFTPIQQQPLGPPGRNPNMPQVNMEGAPGAPIGDVIKPLQ
SIPTEKITKKPIPEEHMVLKTTFEGLIQKCLAAASDPQTKRKLDDAHKRMEYLYDKLREQ
TLSPAIVGGLHNMARSIECRSYTDGLNIHTHIVSNSNFSETSAFMPVLKVVLTQANKLGV
NT seq
4683 nt
NT seq
+upstream
nt +downstream
nt
atgaagctaaaagaaattaaccgaacagccatccaggcctggagtccagcgcagcagcac
cccatctatcttgcagcaggaacgtcggcccagcagctcgatgccaccttcagcaccaat
gcatcactggagatctttgaattggatctggctgatccttctttagccatgaagtcatgt
ggttctttttcttctccacacagataccacaaactagtctggggtccacatggcattgaa
gaccagagtttgccatcgggtctcctcatcgctggaggagagaacggcaacatcatcctc
tatgacgcctccaaaatcattgctggagacagtgaagtgatcatttctcagagcgagaaa
catacaggaccagttagagctctcgacgtcaactcgtttcagacaaaccttgtggcctct
gggggaaatgagtcagaaatctacatttgggatttgaacagcttgagctccccaatgacg
ccaggacccaaaacacagcccctagaggacatcagctgtgtggcgtggaacaaacaagtg
cagcacatcctggcctcggccagtcccagcggaaaagcttcagtctgggatctgagaaaa
aacgacctgatcatcaaagtcagcgatcacagcaataggatgcattgctctggtctgtcc
tggaacccggaggtggccactcagttggttctggcgtctgaagatgaccgaatgcccgtc
atccaaatgtgggacttgcgttttgccacctcccctctcaaagtgctggagagccacaca
agaggtgtcttagccatagcctggagtgaagcagatccagagctgctcctgagctgtggg
aaagataaccggatcctgtgctggaaccccaacacggctgaggtcctgtatgagctgcca
accagtactcagtggtgttttgacatccagtggtgtcccagaaacccagctgtgctttct
gctgctgcctttgatggccatatcagcatttactccgttatgggaggaagcaatgataac
accattactttacaggctgaacagttaagtagttcatttggaaatatggatccttttggc
acgggcaaaacactgccgcctttacagctgcctcagaccgtcacgacccagagcaccgtc
acacctctgaagaaaccccccaaatggatccgtagaccagttggagcatctttcgctttt
ggtgggaaactagtcactttggacaacattaagccagcagcccaacagccgcagcagact
gctgcccatgtcgttcatatcagtcaggttgtgacagaaactgatttccttgatcgatcg
aaccaacttcaggcgacactcactgcaggaaatttccttgagtactgccaaaccaagatt
gaagctgctcagagtgaatttgaaaagaccgtttggtcttttctgaaggtgaattttgaa
gaagatgcacgagggaaatatttggaccttttgggatacaagaaggaagagctcgcccta
aagattgcatcagcgttagaaaggaactgcaaatctgatgaggccgatgtgctttcactc
atacctcaccatcatcccgctcctgtgtcaaaccgagtgcctgaccctgattctaagcct
gaactagtccttgaaactaaacccactggtgtgccggctcatcctcagctcgagccaaaa
aatccttcaaaccttgagttaaaccttcattctgtgcacgaacctttgcttgaactcaca
acccagaaatctcaatcacagccctcagtggacttcacccctccagtagatctcaccacc
ttctttgacccgacacctccagtcgatctcacctactcctttgtccagactcctccagtg
gacattgcttttcctgctgatatcacatcacaggttgattcttctggtcatatgatcctc
acacctcaagtgaagtcagagtctgtgcaacttttcgctccttcaacttgtcacctggga
tcttcagatctactgttaccagctgaatctactgctgcagtggtgccagaagagtctctt
cctcaaccaccagttgagtttcagcagcctgtgccacttaagaaccaagcgtccagtgca
atgcattctgaaccagtgctacctttaccagctggaccttctgagtctgtacaagaaggc
actgttgatttacaacagccagaatcttatgtgatgccaccatgtagctctcagccgctg
gccactcttggcctttctccagatatcttacctcgagaagccatgtgcttgcaagctcta
gctgactcccaaccacctgcaccagaatctgatttgacgacacaacatcctgtttctgat
cttctgaataccagtgattgccagccagaggaggtttctggtagtggtgacccaaataaa
tccagggctaaagaggaaacaacactggatgaggttgagaagaaaagccctgtagaggaa
gaagcagaaccgcctgccacggagacatcagacctcgatgagattccttttgaagatgaa
gaacctgctgctgaggagacgtccaacacagacattactccagcccctacttcagacacc
gttaacctcaaagttagccaggatattgatgggctgatcacacaagcactgctgactggt
gattatgaagctgctgttaacctctgtctgcatgataaccggatggctgacggcatcatc
ctggctattgctggcggacctgagcttctggcaaagactcagaaaaaatacttcagcaaa
actcagagcaaaatctccaagctcattagtgccgtggtgatgaaggactggttggacatt
ttggagacatgtgacctgcagaactggaaggaagctctggctgcagtaatgacttacgcc
aagccagaggagttctcctcactgtgtggtctgctgggctccaggctggaggctgctgag
gaagcggcactgcaggctcaggcctgtctctgctacatctgcgcaggcacagtagagcag
ctggtcgcctactgggccaaagctcaggactcctgcagcccgctgtcattgcaggagctg
gttgagaaggtggtggtcctgcagagagctgtggtgaaagctcagggtggtgttcctcct
gatatgggtgcactgctggcagagaagatgaatcagtacgccagtctgctggcatcacag
ggcagcttacagacggccatatcctacctgcccaccaacactcaacaggttgctgtgcag
cagttgcgtgatcgtctgagcagagctctgggtcagcagcagcagnccaggcagcctgga
gcagtgactggaatgcaaaacatgcgccagacgcttcccgccgctgtaccagcgcagaca
tacgcacaacctcaacctccacaggtccccgcgcagcccgccgcgcctcctcagtattac
caacagggtagatccgccactactgtcacgtcctggagtaaccaaacccctacagctctg
cccagtgtccctcgcccgctagtgcctgccgctgacccgcaggtggagtccacacctcca
gcctttggccttcaggctccagcgagtgggtccgttcctgcctccaatccgttcatgtac
tcccagcagtaccagaactatcatcctgtccagcagttcacacctgccgccgggactcct
ggcatctatcagcctctttcatactcttcttctacagcctctcctcttcctcctccactc
tcctcctcctcttccgcagctgctgtctatcctccgcagttcatgcatcctgcctcctct
cagccagctgtgatttctgggcctcctcagggaggtcagcctttttcctctccagccctc
tcttctggcatgtctttccagcatggtgggccggggtcgcccacggcttatcttcctcct
ccagtcgccagagctccaggtactcagaatgatcccgcactgattccagcctcccagaga
acaggaggattaaatcaagactttgcctggtgtttggaaggacctcagaacggctggaac
gatcctcccacactcaacagagctcccaaaaagaagaagatgccagaacacttcactcca
ccagcacccattacagcacccatcatggcccctctaggagagcctcaggtccctgctccc
cagaccatgcagacccttcaaccgcaacaacaggttccagatcagcctgtgggtccagcc
accttcacccccatccagcagcagccactgggacccccgggcagaaaccccaacatgcct
caagtcaacatggagggtgcacccggagctccaattggagatgtcataaagccacttcag
tccataccgactgagaagatcactaagaagccaatccctgaggagcacatggtgctgaag
accacttttgagggactgatccaaaaatgcttggctgctgcttcagacccgcaaaccaag
aggaagcttgatgatgctcataagaggatggagtatctctatgacaagctgagagaacaa
acactgtctccagctattgtcggcggtcttcacaatatggcccgcagcatcgagtgccgc
tcctacaccgacggactgaacatccacacacacatcgtgagcaacagcaacttcagcgag
acgtccgctttcatgcccgtcctgaaggtggtgctgacacaggccaacaaactgggtgtt
tga
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integrated database retrieval system
