Labeo rohita (rohu): 127171746
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Entry
127171746 CDS
T09007
Symbol
rsf1b.1
Name
(RefSeq) remodeling and spacing factor 1 isoform X1
KO
K11657
remodeling and spacing factor 1
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
127171746 (rsf1b.1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lroh03036
]
127171746 (rsf1b.1)
Chromosome and associated proteins [BR:
lroh03036
]
Eukaryotic type
Chromatin remodeling factors
RSF complex
127171746 (rsf1b.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WHIM1
PHD
DDT
WSD
Motif
Other DBs
NCBI-GeneID:
127171746
NCBI-ProteinID:
XP_050976534
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All DBs
Position
10:complement(1822634..1849647)
Genome browser
AA seq
1683 aa
AA seq
DB search
MSASEAADGFSPELCPSFAVICSFLERYGAMLDLPEVSFPVLERSLQESSAVPKLLVDLH
VKLLRKIGKSVSADRWEKNLIKICQEFNTTWAWELEKKGYREMTVECKTGILKYLCECQF
DDNVKFKTAINEEDPDKMRLQPIGRDKDGLMYWFQLDQDHNVRVYVEEQDDLDGSSWKCI
VRNRDDLAQILGLLKTQIDPALLVKKDQEEGSSSNSPNPDNEENKKKEGAEAEIRDEKSQ
NDISTSENKENILEKDNAKQEDTETTDGLSEKGLKVKEEQQKHSETANGTGVITGSIKEE
PQDEEEKAKNLSTPSQNAEQTEDVKRKTLEETQRALKNDHQAKIPLKKREMKLSEDFDSN
STGVRNVPVVPVKESRTYFDDSRSGAEKINGHVPHLTLSESEAQKGSESLQKESTEESKS
ENLPLVLEKSKERKKERKDDQKEEKMDKNETRSCAEEQMEVEKPDESCAEENKEKSETSQ
SHKEEKPSSVSKQSEKTPDSEKVIDNKKSPSADSMDATEVNTSTLPEESTKAESKDLANK
ESVKDLSKEATKELPNKESSRDLARDKSVKIPLKDEPTKDQSVKHLSEEQTSIEKPTKDA
SKEDLPNTESSKESIKDLPKGEPAKESLKDLSKEETSKEESMKILPDEQSKKDLAEESTQ
SPKDSNEDHEKADTNASMPMETESFQSSKTEESSSREVIKPHSGTEKPENTEETKPHHSS
ADTTTEKEPTAIVSKTEKQSMSEAKNRESESIASKPSEETDGPQGKSQEQPKSASSDLEK
SVSDSTSKPSTPKTTEKGDGEEKCDTAETDKNKNLEMSKDKDEKGEAANSSEESALKKSD
EVKATEQPNESKSLEKPPLNREHEKEPESEEGSKEKPMEVDSAISKADKIQSETTTASKK
ETDVPVDQNTTSIKQSKQDAASEEREASGDVREKSSTAVKSSKRPGRPPKKAQESQDEDK
TGEEQEEKARQEGIRMKIKIPAHKRKAELQREEARGDSESEVTDGRCLRRSPRICRPTAK
AVEIQDRRAERKQATPVSEKEKDDNEDKEEEDTVQRKPRKAENLQPDGQTKPKVGRRRKR
QPWSRMRRKKKCSDDDDDDEESESEEEETEEDDSDEDYKVEKTRKRRRNRNRERNSSDSS
TSSSENDEPNDDPCKHCGLPNHPELILLCDSCDSGYHTACLRPPLMIIPDGEWFCPPCQH
KQLCDRLEEQLQNLDAALKKKERAERRKERLVYVGISVENIITPSVEVEEEKEELVKEKK
EVKKSKSWGRRSTRAKKYISYRFDEFDEAIEEAIEEDIKEAEGGGAGRGKDMANITGHRE
KDMSTILQEDGKENGRPRQTSAAQKKKRRRLNDLDSDSTVDEEESEDEFRLSESSEDEEF
VASDNEAESEAEVPSYEDSDFGSDVARPRRRQPPRRRRKPRGYSDEEELETDEEEEEEEM
VTEGSSEFSASDLDVRCRRSYRSRKQEVNYCESSDSDGSQASTNKDKKKKRRRLSSSDSE
VSFQSESDEEDRKPKKIRADSSEEESRKRRRRLSLKRRRESEDDDDDDDSDESEEEERPI
RKRVNRIDSDDSESEEEVKKSPSEKEKDKETEETVAKGPSPLDYNLVELPPTNGQSPMKG
LEGLIPRPGVGVTPKNGNAPSAPNGMEIPAQDEDEDDLLGVTDLVDYIRLGCSQLLRFLF
VGG
NT seq
5052 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcctcggaggcagcggacggtttttccccggaattatgcccgagcttcgccgtg
atctgctcgtttctggagcggtatggagcaatgctggacctgccggaggtgtcgttcccg
gtgctggagcgcagtctgcaggagagcagcgcggtacccaaactcctcgtggaccttcac
gtgaagttactgcggaaaattggcaagtctgtgtctgcagacagatgggagaagaatctc
attaagatctgtcaggagtttaacaccacatgggcatgggagctggaaaagaaaggttac
cgagagatgacagtggagtgtaagacaggaatattgaagtacttgtgtgaatgccagttt
gatgacaatgtcaagtttaaaaccgctatcaatgaagaggatccggataaaatgcgtctt
cagcccatcggcagagacaaagatggcctcatgtactggttccagctagatcaagaccat
aatgtgagggtctatgtagaagaacaggatgatctggatgggtcttcttggaagtgtata
gtaagaaatagagacgacctggctcaaatccttggattgttgaagactcaaattgatcca
gcacttttggtaaagaaggatcaggaggagggctcatctagtaacagtccgaacccagac
aatgaagagaacaagaaaaaagagggagctgaagcggagatcagagatgaaaagtcacaa
aatgatatatccacatctgaaaataaggaaaacattttggagaaagacaatgcaaagcaa
gaagatacagagaccacagatggtttgtcggaaaaaggcttgaaggtaaaagaagagcag
cagaaacattcggagacggcaaacggcactggcgttattactggatcgatcaaagaagag
ccacaggatgaggaggagaaagccaagaacttgtcaacaccttcacagaatgcagaacag
acagaggatgtgaaaagaaaaactttagaagagactcaaagagctttgaaaaatgaccat
caagccaaaatccccctgaaaaagcgggaaatgaaactaagtgaagacttcgacagcaac
agcacaggagtacgaaatgttcctgtcgttccggtgaaagaatcgcggacgtatttcgac
gacagcagatcgggtgccgaaaaaatcaacggccacgtccctcaccttacgttatctgag
agtgaagcgcaaaaagggtcagagagtcttcaaaaagaaagcacagaagagagcaagtca
gaaaatctccctcttgttttagagaaatccaaagagaggaaaaaggagagaaaggatgac
cagaaggaagagaaaatggataagaatgaaaccagatcgtgtgctgaagagcaaatggaa
gtggagaagcctgatgaatcctgtgctgaggagaacaaagaaaaatctgaaacttctcaa
tctcacaaagaagaaaaaccctcatcagtaagtaaacagtcagaaaagacacctgattct
gaaaaagtaattgacaataaaaaatctcccagtgctgacagtatggatgctactgaagta
aatacatcaacactgccagaagagtcaacaaaagcagaatcgaaagatcttgcaaacaag
gagtcagtgaaagatctctcaaaagaagccacgaaagagctcccaaacaaagaatcgtca
agagatcttgcaagagacaagtcagtgaaaattcccttaaaagatgagcctacaaaagat
cagtcagtgaaacatctctcagaagaacagacttcaattgaaaagccaactaaagacgcc
tcaaaagaagatctcccgaacacagaatcgtcaaaagagtcaataaaagatcttccaaaa
ggtgagccagcaaaagagtcacttaaagatctctcgaaagaagagacttcaaaagaagag
tcaatgaaaatcctcccagatgaacagtccaagaaagatctcgcagaagaaagtacgcaa
tctcccaaagactccaatgaagaccatgaaaaagcagatacgaatgcttccatgccgatg
gaaactgaatcattccagtcatctaaaacagaagaatcttcttcccgtgaagtaatcaaa
ccacattctggcacagaaaagccagagaacacagaagaaacgaaacctcatcacagctct
gcagacaccaccacagaaaaagagccaactgccattgtctcaaaaactgaaaaacagtcc
atgtctgaagcaaaaaacagagaaagtgagtccattgcctccaaaccttctgaagagact
gatggccctcaaggtaaatcgcaagagcagcctaagtcagcatcaagtgatcttgaaaaa
tctgtttctgattcaacgagtaagccaagcacaccaaaaaccacagagaaaggagacggt
gaggaaaaatgtgatacagctgaaactgataaaaataagaatctggaaatgtcaaaagac
aaggatgaaaagggtgaagctgcaaacagctctgaagaatctgcattgaaaaaatcagat
gaggttaaagctacagaacaacccaatgagtccaagagtttggagaaacctcctttgaac
agagaacatgaaaaggaacctgaatcagaggaagggagcaaagagaagccaatggaggtt
gattcagcgatcagtaaagctgataaaattcaatctgagactacaacagcaagtaagaag
gaaaccgatgttcccgtggatcaaaacaccacctcaatcaaacaatctaagcaagacgca
gcttctgaagagcgtgaggcttccggggatgttcgagaaaaaagcagcactgctgtgaaa
agcagtaaaagaccaggccggcctccaaagaaagctcaggagagtcaggatgaggataaa
acaggcgaagaacaagaagaaaaggcacggcaggaaggaattcgcatgaagatcaaaatc
ccagctcacaagcggaaggcggaacttcagagagaagaggcgaggggagattcagagtct
gaggtgactgacggcaggtgcttgaggagatctccgagaatctgcagacccaccgctaaa
gcggtggagatccaggataggagggcagagcggaagcaggccactccggtgtcggagaaa
gaaaaggatgacaatgaagacaaagaggaggaggatactgtacaaaggaagccaaggaaa
gctgagaatctgcagccagatggccaaacaaaaccaaaggtgggtagacgtcgaaaacga
caaccatggtctcgcatgagacgtaaaaagaaatgttcggacgacgacgatgatgacgag
gagagcgagagtgaagaagaggagacggaggaggatgacagcgacgaagactacaaggtg
gaaaagaccaggaaaagaaggagaaaccgaaaccgagagcggaacagctctgactcctct
acctcttcatcagaaaatgatgaacccaatgacgacccctgcaaacactgtggccttccc
aaccatcccgagctgatactcctgtgtgattcctgtgacagcggctaccacactgcctgt
ctgcggcctccgctcatgatcattccagacggggaatggttctgccccccctgccagcat
aagcaactttgcgacagactcgaagagcaattgcagaatttggatgctgccctcaaaaag
aaagaacgtgcagagcgaaggaaagagcgactggtgtatgttggcatcagtgtagagaac
atcatcactccctctgtggaagtggaggaagaaaaggaggagctagtgaaagagaagaaa
gaagtgaagaaaagcaaaagttggggacggagatcaaccagggcgaagaaatacataagc
tacaggtttgatgagtttgatgaagcgatcgaagaagcaattgaggaagacattaaagag
gcagagggtggaggagcaggccggggaaaggacatggcgaacatcacagggcacagagag
aaggacatgtccaccatcctacaggaggatgggaaggagaacgggcggccgcggcaaact
agcgcagctcagaaaaagaagcggcggcgtctcaacgatctcgacagcgacagcaccgtg
gatgaggaagagagtgaagacgagttccgtctcagtgaaagttcagaggatgaagagttt
gtggcgtcagataatgaggcggagagtgaagcagaagtcccgtcctatgaggacagtgac
tttgggagcgatgttgcacgcccgcggaggagacagccgccacgcaggagacgcaaaccc
agaggatactctgacgaggaagagctggaaactgatgaagaggaggaggaggaggagatg
gtgacggaaggctctagtgaattcagtgccagcgatctggacgtccgctgtcggcggtcc
tatcggagtcgtaagcaagaggtgaattactgtgaaagctcagattctgacggctcacag
gccagcaccaacaaagacaaaaagaagaagcgcagacggctttccagctctgacagcgaa
gttagtttccagtctgaatctgatgaagaagaccggaagcccaagaagataagagcggac
tcgtctgaggaagaatccaggaaacgtcgaagacgcctgtccctcaaacgccggagggag
tcggaggatgacgacgacgacgacgattcagacgaatccgaggaagaggagcggcccatc
cggaagcgcgtgaaccgcatagactccgatgacagcgagagcgaagaagaggtaaagaag
agcccatcagagaaagagaaagacaaagagacagaggagaccgttgccaaagggcccagt
ccactagactacaacttggtggagcttcctccaactaacggacagagcccgatgaagggt
ttggagggtctcatcccgcgacccggcgtgggagtgacgcctaaaaacggcaacgcccca
tcagcgccgaacggcatggagatccccgcgcaggacgaagacgaagacgatcttttgggc
gtcacagacctcgtagactatattcgtcttggttgtagtcagcttttacgttttctcttt
gttggaggttaa
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integrated database retrieval system
