Labeo rohita (rohu): 127171907
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Entry
127171907 CDS
T09007
Symbol
dcp2
Name
(RefSeq) m7GpppN-mRNA hydrolase
KO
K12613
mRNA-decapping enzyme subunit 2 [EC:
3.6.1.62
]
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
127171907 (dcp2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lroh03019
]
127171907 (dcp2)
Enzymes [BR:
lroh01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.62 5'-(N7-methylguanosine 5'-triphospho)-[mRNA] hydrolase
127171907 (dcp2)
Messenger RNA biogenesis [BR:
lroh03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
127171907 (dcp2)
mRNA degradation factors
5'-3' decay
Decapping complex
127171907 (dcp2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCP2
NUDIX
NUDIX_4
Motif
Other DBs
NCBI-GeneID:
127171907
NCBI-ProteinID:
XP_050976801
LinkDB
All DBs
Position
10:complement(23705281..23713489)
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AA seq
392 aa
AA seq
DB search
METKKGEIPNGLLDDLCSRFILHIPSEERDNAIRVCFQIELAHWFYLDFCMQNSPGLPQC
GIRDFAKAVFNHCPFLLPQGEDVQKVLEQWKEYKMGVPTFGAIILDETLDNVLMVQGYLA
KSGWGFPKGKVNEDEAFHDCAVREVLEETGFDIRDRICQKTYIEQKISDQLVRLYIIPGV
PKDTKFNPKTRKEIRNIEWFPVDKLPCHRNDMTPKSKLGLAPNKFFMAIPFMRQLREWIA
KHKGESTSSDEDFASNGSTPCKPFRSKPRRSQMLMEASPESWSKQKQQKPFGQPSQSELV
DVLKPKNHVKGNSKKHQESPNLKKRANGVSQQQRDDKKLQPRRLQDNFDTDAAGEVYGCN
GEADYGEYVLSSRSFLSFKFDREAIMKSCFES
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atggaaacaaaaaaaggggagattcccaacgggctgctggatgacctttgcagtcgcttc
attctgcacatcccaagcgaggagcgggacaatgccatcagagtttgcttccagattgag
cttgcccattggttttacctggacttctgcatgcagaattcaccaggattacctcagtgt
gggataagagactttgccaaagctgtttttaatcactgtccattcctgctgccccaagga
gaggatgttcagaaagttttagagcagtggaaagagtataagatgggtgtgcctacgttt
ggtgccattattctcgatgaaacgcttgacaatgtgttgatggtccagggttatctggcc
aaatctggctggggttttcctaaagggaaagtcaatgaagatgaggctttccatgactgc
gctgtgagagaagttttagaggagacgggctttgacatccgagatcgtatctgccagaag
acatatattgaacagaagatttcagatcagttggttcgattgtacattataccgggagtt
cctaaagacaccaagtttaaccccaagaccagaaaagaaataaggaacattgaatggttc
ccagtggataagctgccgtgccacaggaacgatatgaccccaaaatccaagcttggactg
gctcctaacaagttttttatggctattccttttatgaggcagctcagagagtggatcgcc
aaacacaaaggagagtcaacgagtagcgacgaggattttgcgtccaatggcagcacacct
tgcaaaccattccgttctaaacccaggaggtctcagatgttgatggaagcgtctcctgaa
agctggtcaaagcaaaaacaacagaaaccctttgggcagccctcccagagtgagttagta
gacgtgcttaaacccaagaatcatgtgaaaggcaacagcaagaaacaccaggagtctcca
aacctgaaaaaaagagctaatggtgtcagtcagcagcagagagatgacaagaaacttcag
cccagaagactgcaggataactttgacacagacgcagctggtgaagtctatggctgtaac
ggagaggcagactacggggaatacgttctctcctcgcggtcttttctcagctttaaattt
gacagagaggccatcatgaaatcctgcttcgagtcctga
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