Labeo rohita (rohu): 127171950
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Entry
127171950 CDS
T09007
Name
(RefSeq) beta/gamma crystallin domain-containing protein 3
KO
K25509
beta/gamma crystallin domain-containing protein
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lroh04812
]
127171950
Cytoskeleton proteins [BR:
lroh04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
127171950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Crystall
Ricin_B_lectin
RicinB_lectin_2
Motif
Other DBs
NCBI-GeneID:
127171950
NCBI-ProteinID:
XP_050976883
LinkDB
All DBs
Position
10:complement(24303413..24333854)
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AA seq
1699 aa
AA seq
DB search
MSDLKRQMSWHEDFARNISRFFSRNKSADSESNESEVRETDGSAGVACSAEPDPHPTPEQ
HLNAAAAQESQPSDVPDGNTASPTEDGSRGDAGGPAPPSASTAPPADGFLRRLGSLFHFS
RAEPAGVQRERRSDADGSSLTTGQRDTQTSAETQESGGGAGPAEEPSVCRSELTHTPSEE
QTEEDRSDAVNIDAKECLEDKRRYDLACPPVVTYGTYRGLREVRKPKKKHRVELHSPISE
GEEATQPDGHEDKEISSCAVNTMSSDGQENPTAASSSQTQQVDVASAQSVLSDQVSAVES
ELTPAHQLPDVAGSGSLLTCVETDSAFQSTQAEQSPPNDPVKSGPEHLENAALETSSGDN
EDLMVSVINIDHHDAVPAQEQSSKQQKPSLIADRTDGLAPDSQTCWTLEDVQLKRAGVDS
GMDEEVLRMESKKMVDSILTNAVAALHKMDASETEPGVLLTCKPNEGSEALLFEDGRGDG
GTNAEHQFRGMLTDHTLSVVLEETLGGHVDCSRSPPSSGYESIAGSDTDIRCIVGVASDV
TATSGPIGSQNENQAILEYLFEEKEDATASHKSSGRNSLLSAAAADELLSPNVHSHKEES
LWDEQHTGDVSICEAEWVRGEERPQDTAKDNATSNNCRLSLNGSCGTAPSGHQESPRQSQ
TLSVMGKSEPVNRSLSPDMTDLDMMSGITQQPPATQSHKSEQSEAPSSGSEEQVCQVSRA
GIDSRVLPSVGEVQYSGGLHPSQWASVRAVCCEVTEDQSLSPAALDEHFKTELSVNRADA
GTSVVSVSGRRIHLDPVDSSSRTAAVVPQHSRFHDLDLHQVDGGFAIISEEEESDMVFVN
DTGPMHSPSTRRAKAYPFSLSPIYEEEFGREEASGPETLQVPPATEEEQRSVEQPASSIL
SLLQSVSEKLQSSVICSSVEESVQAPQSNRYSCGDDSEDDDENPSILQSHQLTAAEPEHE
TASDTPDGMQEERDCDGTLGNVGKNADTPFYQYLKSRIMPSGDEESEDTECMCPSAGNTV
VTGEIGGFGKVNPRPTAVLIYESQSLSGERRQICDDVEDAGRDLFAHRGTLHALRGCWLL
YVDPWYRGSCVLLEEGQTVKTSGGSQQDLKETTEPNRPDLGDALSVGSLRTLLKDDSVPE
IHLYPSSSQTLRLYSATDLTERRGPVLLSELCVRTGCWLVCEQPGFSGRSAVLETDARAT
PLLQNTLLSCVKSLRPLKMGGLRVTRPLDPKVVLFEKPQFQGLFRELPDHDPRLTDSASS
LRVTGGIWVAFSSEGFRGHQCVLEEGEYADCTRLFGGTELSIQSLRCIQTDFLEPAVSRK
ISDEEIDIHQEIPDLQETDGISVKSGAWVAYSERCFTGQQYVLEKGRYPGLLDWGDGRSS
ARSLRPVHRDVCRMVEPKFLLRVYSRTRYGGESREFESDVPDCGVPAVASLRVIRGSWLL
FDEERYSGNQYILGEGLYPDLTSCGCTSTAIKSLKPIPYSFAEPSVSLFSLSGFKGLEET
VCSDSENLSRHFIQSVRVHSGLWVAYEYARFKGRQMLLKPGGYPVWVEHSGWDTIGSLKP
LKQPKAFVQLRSRALGSVLTSESVSDGSFPAKLFLSPADRSLDTQRWIFTDGLLKNMAQR
GCLSVIGAKACAGAPVALWEEHGRVNQRWSLNEDGSICSHLNRSLALDLKGGCGADRDHL
ILRELHAGSASQTWDVDVL
NT seq
5100 nt
NT seq
+upstream
nt +downstream
nt
atgtccgatctgaagaggcagatgtcctggcacgaggatttcgccagaaacatttccaga
ttcttttccagaaataaatccgcggacagcgagagcaatgaaagtgaggtcagagagacg
gatggatccgccggagtcgcctgcagcgctgagccagatcctcatccaacacctgagcag
cacctgaacgcagcagcagcacaggagtcgcagccgtctgacgtgccggacggaaacaca
gcgtcaccgacggaggacggatcgagaggggatgccgggggcccggctcctccgagcgcc
tccaccgcgccccctgcagacggcttcctcagacgcctgggcagcctgttccatttcagc
cgggcggaaccggccggagtccagcgagagagacggagcgacgcggacggcagcagtctg
actacaggacagagagacacgcaaactagcgcagagacacaggagagcggaggaggggcg
ggaccggccgaggaaccgtctgtgtgtcgttcagagctcacacacacaccttcagaggag
cagactgaggaagataggagtgatgccgtaaacatcgatgccaaagagtgcttggaggac
aagagacgttatgatctagcctgtcctcctgtagtgacttacggcacgtaccgtggattg
agggaagtcaggaaaccaaagaagaagcatcgcgtcgagcttcattcgccaatctctgag
ggagaagaggctacacaacccgacggccatgaggacaaagagatttcctcttgcgccgta
aacaccatgagctctgatggtcaggaaaatcccactgccgcatcttcttcacagacacag
caggtagacgtcgcgtcggcacagagtgtcttatcagaccaggtttccgctgttgaatcg
gaactaactccagcacaccaactccctgatgttgcaggctctggttcgttgcttacctgc
gtagagacggactcggccttccaaagtactcaagcggaacagagtccaccgaatgacccg
gttaagagcggacctgagcatctcgagaacgctgcgctagagacgtcatcaggcgacaat
gaagatcttatggtttcagtcatcaacatagaccatcacgacgcggttcccgctcaagag
cagagctcaaagcaacaaaagccatctttaattgcagacagaacagatggtctagcccct
gattctcagacgtgctggactcttgaggacgttcagctgaaacgggctggggtggattct
gggatggatgaagaggtcctgcgaatggagtctaaaaagatggtggatagcatcctgaca
aatgccgtcgctgccctgcacaagatggacgcatctgagacggagcctggcgtcctgtta
acttgcaaacctaacgaaggctcagaggcactgctgtttgaagatggtcgtggagatgga
ggcactaacgcagagcatcagtttcgcgggatgttgacagaccacacgctgtctgttgtt
ctcgaggaaacactaggaggccacgtggactgcagcaggtcgccgccttcctcagggtac
gagtcaatcgctggctctgacacggacatcaggtgcatcgtgggcgtggcctctgatgtc
accgctaccagcggtccaatcggctctcagaatgagaatcaggccattcttgaatatctc
tttgaagaaaaggaggatgcaactgcttcccataagagcagtgggagaaactctctgctc
agtgctgctgctgctgatgagctattatccccaaatgtccacagtcataaggaggagtct
ctctgggatgagcagcacacgggtgacgtctccatatgcgaagcggagtgggttagaggg
gaagagagacctcaggatacagccaaagacaatgcaacgagcaataactgtagactcagc
ctgaatggttcttgtggcactgctccatcaggccatcaggagagtccacgacaaagccaa
actctcagtgtaatgggaaagtcagaacctgttaaccgcagtctttcacctgatatgacg
gatttggatatgatgtcaggaatcacacagcagccaccagctacacaaagccataaatct
gagcagtctgaagcaccttcttcaggcagtgaagagcaggtctgccaagtgtctcgggct
ggaatagattcacgtgtcttgccatccgtgggtgaagtccaatattctggagggctccat
ccttctcagtgggcctcggttcgagcggtctgctgcgaagtcaccgaagaccaaagcctg
agccctgcggcgcttgacgagcatttcaagacagagctcagcgtgaatcgagcagatgct
ggaacgtcagtcgtgtcagtttcaggccgtagaattcaccttgaccccgtggacagttcc
agcagaactgcggccgttgttccccaacactcccgatttcacgatcttgatctccaccag
gtcgacggaggcttcgccatcatcagcgaggaggaagagagtgacatggtgttcgtgaac
gatacggggcccatgcacagtcccagcacgcgtcgagccaaagcataccctttctccttg
tcccccatctacgaggaggagtttggccgtgaggaggcttcagggccggagacactgcag
gttcctccagctacagaagaggagcagaggagcgtggagcagccggcgtcgtccatcctc
tccctcctgcagtcggtcagcgaaaagctgcagtccagtgtgatctgcagttcagtcgag
gagtccgtccaggcaccgcagagcaatcgctactcctgcggagacgacagtgaggacgat
gatgagaaccccagcattctacagagccaccagctcactgcggccgaaccggaacacgag
actgctagtgacactccggacggaatgcaggaggaacgggactgtgacggcacgctgggt
aacgtcggaaagaatgccgatacgcctttctatcagtacttgaagtctaggataatgcca
tcaggtgatgaagaatctgaagacactgaatgcatgtgtcctagtgcaggcaacacagtg
gttacgggagagatcggagggtttggaaaggtcaaccctagacctacagcagtgctcatc
tacgagagtcagtcgctgagcggcgagagaagacaaatctgcgatgacgtggaggatgct
gggagggatctgtttgctcacagaggaacgcttcatgcgctgagaggatgttggctgctc
tatgtggatccgtggtaccgtggctcgtgtgttcttctggaggagggtcagactgtgaag
accagcggaggatctcagcaggacctgaaggagaccacagagcccaacaggcctgatctc
ggtgacgcgctgtctgtgggctccctccggacgctgctgaaggacgacagtgttccagag
atccatctgtatcccagctcctctcagaccctccgtctgtattccgcgacagacctgacg
gagcggcgcggccccgtgctcctctctgagctctgcgtcaggaccggatgctggttggtt
tgcgagcagcctggattcagcggcagatccgccgttctggaaacagacgcgagagccacg
ccgctgctccagaacaccctcctgtcctgcgtgaagagtctccggccgttaaaaatgggt
gggctgcgggtgacgaggccgttggacccaaaggtggtgttgttcgagaagcctcagttc
cagggtctgttcagggagctgccggatcacgatccccgtctgacggactccgcttcatct
ctgcgcgtcacgggtgggatatgggtggcgttctccagtgaagggttcagaggtcatcag
tgcgtgctggaggagggtgaatatgccgactgtacacgactgtttggcgggacggagctg
tcgatccagtcgctgcgctgcattcagaccgatttcctggagccggcagtgagtcggaag
atctctgatgaggaaatcgacattcatcaggagattcctgatctgcaggaaaccgacggc
atctccgtgaagagcggagcgtgggttgcgtacagtgagaggtgtttcacgggacagcag
tacgttctagagaaaggccgttatccggggctgctggattggggcgacggacggagctcg
gctcgctcgttgcggcccgttcacagggacgtctgtcggatggtggaaccaaagtttttg
ctgcgtgtctacagccggacgcggtacggcggcgagagccgagagtttgagagcgacgtt
cccgactgtggcgttccagctgttgcgtcgttgcgggtgatccggggaagttggctgctg
tttgatgaggagcgttactctggtaaccagtatatcctgggggaggggctttaccctgat
ctcacttcctgtggctgcacatcaacagccatcaagtctttaaagcccattccatacagt
ttcgcagagccgtccgtgagtctgttttctctcagcggttttaaggggcttgaagaaacc
gtgtgttcagactcggagaacctgagccgccacttcatccagtctgtgagagtccacagc
ggcctgtgggtggcgtacgaatacgctcgttttaagggccgtcagatgctgctgaagccg
ggaggatatccggtttgggtggaacacagcggctgggatacgatcgggtcactgaagcct
ctcaaacagcccaaagcgttcgtccagctgcggagccgcgctctgggttcggttctgacc
agcgaaagcgtttcagacgggtcctttccagccaaactcttcctgagtcccgccgatcga
tcgctggacacgcagcgctggatcttcactgacggcctcctgaagaacatggcgcagagg
ggctgtctgtctgtgatcggggccaaggcctgtgccggagccccagtggcattatgggaa
gagcacgggcgcgtcaaccagcgctggagtctcaatgaggatggaagcatctgctctcat
ttaaatcgcagcctggcactggacctcaaaggtggatgcggcgctgaccgagatcatctg
atcctgagagagcttcacgccggcagcgccagtcagacctgggacgtcgatgtgctgtga
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integrated database retrieval system
