Labeo rohita (rohu): 127171951
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Entry
127171951 CDS
T09007
Symbol
wrn
Name
(RefSeq) bifunctional 3'-5' exonuclease/ATP-dependent helicase WRN isoform X1
KO
K10900
werner syndrome ATP-dependent helicase [EC:
5.6.2.4
]
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lroh03032
]
127171951 (wrn)
03400 DNA repair and recombination proteins [BR:
lroh03400
]
127171951 (wrn)
Enzymes [BR:
lroh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
127171951 (wrn)
DNA replication proteins [BR:
lroh03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
127171951 (wrn)
DNA repair and recombination proteins [BR:
lroh03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
127171951 (wrn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DEAD
Helicase_C
RQC
HTH_40
RecQ_Zn_bind
HRDC
ResIII
Motif
Other DBs
NCBI-GeneID:
127171951
NCBI-ProteinID:
XP_050976884
LinkDB
All DBs
Position
10:complement(24155797..24202881)
Genome browser
AA seq
1386 aa
AA seq
DB search
MGDRTLPEWMNKPQEEHTSGTYKKNVLEDDLPYLEFGGTVTYSQERHDCSFLSEDLRYGL
GSGSAVGFDLEWPPSFTKGKTKKVAVVQLCASEEKCYLFHISSMSGFPPGLKMFLEDENI
MKVGVGIEGDKWKLLSDYDIKLKNIVELSDLANKTLRCCEKWSLDGLVKHLLKRQLFKDK
LVRCSQWDDFGLSEDQKRYAATDAYAGLLIYQNLQEIISGRSKTSALSLKQKVFQIACDL
KDLADNLPDEIDCMNSAERLVADLSQTVASLRCTLLNGSKPLDPSVEEAETKPQNQDQSH
SQLEEDADRQTKRECVMSLDISEYELQMLEEQARQEQLEEECILAFQTQQASAPQNSNDM
ESDEDFDDEMMKCAADIERLNDEHVHEKQALAEDDDEDVEEDEEEGIDSSIPQPVPEQIK
CLKMYFGHHSFKPVQWKVIHSVLTERRDNLVVMATGYGKSLCFQFPPVYCQNVSVVISPL
IALMEDQVLQLTMSNIPACFLGSAQTKYLYDEVKRGHFRVVYMTPEFCSGNIPLLVQLDR
TIGLSLVAVDEAHCISQWGHDFRSAYRDLGKLKKNLPGVPILALTATASPSIREDIVKSL
HLINPLITCTSFDRPNLYLDVNRKSGDVIQDLKQFLVKKKGGGYEFEGSAIVYCPSKKEA
ERVTAVLCKLDIPCGVYHAGLSIKQRRETQHQFMRDEIQCVVATVAFGMGINKSDIRKVI
HYGAPKEMESYYQEIGRAGRDGLPSACHVLWMPGDMVLNRFILNQSKSERFRGYKMDMMA
KMEKYLNSTKCRRKLILCHFEDKRLRKVTSGIMGSSNCCDNCNSGVNTGDPEVVLQDFGT
CAYQLMKAISTMEEKFGITAPILLLRGSNSQRVPDHFRKHFLFGIGRAISETWWKALSRE
LVAENYLMETTGHNKFTILCKLTPKGRSWLSKAEDERHRQLLLQPNMNLFSKVCVPRRKP
DPAHVESTTSKLKSDYTRPSLISFQRQKVSSIVDSHQIVEKAGLPSRPAVRPNQMHTDVK
AQTPAVSAREVQLQSELYGMLVSERQKLAGLRDIPPAVLATNKILLDMAKLRPCTISSLK
QVDGVSEAKAAMLTPLIDVIATFCQSHGLKVDDSSSSTPPVQTESSREYSSVGQFLPDSV
SVTYRLFQLEHKSMRQVADARSLPMAVVESHLLQAQKMGCAVDTDRAGLSPSIYNTIRKI
ISSPPVSSDLSDFKAIRSRVPEDISNFLLRLALYKLQRDASSTAQHDITWIEPLDKSVTA
DRPAVKHVIEESQHEADVMDMNEDELFISIPMPQDSCLSADVRLKPCDPVPQSSGMELAS
WNQDNLDKDTQDLFSDSPVKTESQPIKRKLPDWAEGPNTSVTAATQKKTKKKKGLFSSCC
QQLELL
NT seq
4161 nt
NT seq
+upstream
nt +downstream
nt
atgggtgacaggactctacctgaatggatgaacaaacctcaggaagaacatacatcagga
acctataaaaagaatgttctggaggatgatcttccttatctggaatttggtgggacagtg
acatacagccaggaaagacatgactgctcatttttatcagaagatttaagatatggtttg
ggatcaggttcagcggtgggatttgatctggaatggccacccagcttcaccaaagggaag
acaaagaaagtggctgtagtgcagctgtgcgcatcagaggagaaatgctatctgtttcac
atctcctccatgtcagggtttcctcctggcctgaagatgtttttggaggacgaaaatatc
atgaaagttggtgtgggaattgagggtgacaaatggaagttattatctgattatgacatc
aaattgaagaatattgttgagctctctgatctggcaaacaagacgctgagatgttgtgag
aagtggagtttggatggtctagtgaaacacttgttgaagaggcagctcttcaaagacaaa
cttgtgcgctgtagtcaatgggacgattttggtctgtcagaagaccagaagagatatgct
gccacagatgcttacgctggattgctcatttatcagaatctacaggaaattatatctggc
cgctcaaaaacctcagcactcagtttgaagcagaaagtttttcagattgcttgtgatctt
aaagatctcgctgataatcttccagatgaaatcgactgcatgaacagtgctgagagacta
gtcgctgatctgtctcagacagttgcatctctgagatgcactttgttgaatggcagcaaa
ccacttgatccatcagttgaagaagctgagactaagccacagaaccaagaccagagccat
agtcagcttgaggaagacgctgacagacaaactaagagagagtgtgtgatgtctctggat
atctcagagtacgagctgcagatgctggaggagcaggccagacaggagcagctggaggaa
gagtgtatcttagctttccagactcagcaggcatcagccccccagaactctaatgacatg
gagagtgatgaagattttgatgatgaaatgatgaagtgtgctgctgacatagaaagatta
aatgatgaacatgttcatgagaaacaggcacttgctgaagatgatgatgaggatgttgag
gaagacgaggaagaggggattgattcaagcatcccacaacctgttcctgaacaaattaaa
tgtttaaaaatgtactttggacatcacagctttaaaccggttcagtggaaagtgattcac
tccgttctcacagagaggagggataatcttgttgtcatggcaactggttatgggaagagt
ttgtgtttccagtttcctccagtttactgccagaatgtcagtgtggtcatttcccctctc
atcgcgctgatggaggaccaggtgcttcagctaacaatgtcaaacattcctgcttgtttt
cttggatctgctcagaccaaatacctatatgatgaagtgaagaggggtcattttagagtg
gtgtacatgacacctgaattttgctctgggaatattccacttctagtgcagctcgacagg
actattggtttatcactggttgcagtagatgaggctcattgcatctctcagtggggtcat
gatttcagaagtgcgtatcgtgacctggggaaactcaagaagaatctccctggtgttcct
attttggcgctcacggctactgcgagtccgtctatccgtgaggacatcgttaagagccta
catctgatcaaccctctgatcacctgcacctcgtttgaccgaccaaacctttacctggat
gtcaatcgcaagtctggtgacgttatccaggacctcaaacaatttctcgtcaaaaagaaa
gggggtggctatgagtttgaaggttcagccattgtgtactgtccatcaaagaaagaggcg
gagcgtgtgacggcagtgctgtgtaagctggacatcccatgtggggtttatcatgcgggt
ctgagcatcaaacagaggagagaaacccagcatcagttcatgagggatgagattcagtgt
gtggtggccactgtggcgttcggaatgggcataaataaatctgatatcaggaaagtcatc
cattacggagctcccaaagagatggagtcatattatcaggagatcggaagggccggtaga
gacgggctgcccagcgcctgtcacgtcttatggatgcccggagatatggtcctgaacaga
ttcattctcaatcaatccaaaagtgagcgctttagaggttacaaaatggacatgatggca
aaaatggaaaagtatcttaattctaccaagtgcaggcgaaagttgattttgtgtcatttt
gaagacaagcgtctgaggaaagtgacttctggaattatgggtagcagtaattgttgtgat
aactgcaattcaggtgtaaacactggggatccagaggtggtcctacaggactttggcaca
tgtgcgtatcagctgatgaaggccatcagcactatggaggagaagtttggcatcacagca
cccatcctcttgctgcggggctcaaactctcagcgggttccagatcactttcggaagcac
tttctctttggtatcggcagggcaatctcagaaacttggtggaaagctcttagccgagaa
cttgttgctgaaaattatctgatggaaaccacaggccacaacaaattcaccatcctctgt
aaactcacacccaagggcagatcatggctaagtaaagctgaagacgagaggcacagacaa
ctcctgctgcagcccaacatgaatctgttcagcaaagtgtgtgtaccacggagaaaacca
gatccagcacatgttgagtctactacttctaagctgaagtcagattacactcggccctct
cttatttcatttcagaggcagaaggtcagttctatagttgacagccatcagattgtggag
aaagcaggtttaccatctagaccagctgttaggccaaaccagatgcacactgatgtcaaa
gcccagactccagcggtctcagcgagagaagtccagctgcagtctgaactgtatggtatg
ctggtgtcggagcgtcagaagttagctggtctcagagacatcccaccagctgtactggcc
accaataaaatactcctggacatggcaaaattaaggccgtgcacaatatccagcttgaaa
caggtggatggagtttcagaagcaaaagcagcaatgttaacacctctgattgatgtcatc
gccacattctgtcagtcacacggcttaaaggtggatgattcttccagctctactccacct
gtccaaacagagtctagccgtgagtacagttctgtgggtcagtttctaccggacagtgtc
tctgtcacatacagactgtttcagctggagcacaagagcatgaggcaggtagcagatgct
cgcagtctgcccatggcagtggtggagtctcatctgttgcaggctcagaagatgggctgt
gctgtggacacggacagagctggactctcaccctccatctacaacacaatcagaaaaatc
atctcctctcctccagtcagctcagatctgagtgattttaaagcgatccggtctcgtgtc
cctgaagatatcagtaacttcctgctcaggctggcgctttataaactccagagagatgct
tcatccacagcacaacatgacatcacctggatagagccgctggataaatcagtgactgca
gacagacctgctgttaaacatgtgattgaagagtcacagcatgaggcagacgtcatggac
atgaatgaagatgaactcttcatcagtattcccatgccacaggattcctgcttgagtgct
gatgtccgtctgaagccatgtgacccagttcctcagagcagtggaatggaactggcctcc
tggaaccaggataacctggataaagacacacaagatctcttcagcgattcacctgtgaag
actgagagtcagcctataaaaagaaaactgcctgactgggctgaaggaccaaacacctca
gtaactgctgctactcagaagaaaaccaaaaagaagaaaggacttttcagctcctgttgc
cagcagcttgaactcctctag
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