Labeo rohita (rohu): 127171969
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Entry
127171969 CDS
T09007
Symbol
gigyf1b
Name
(RefSeq) GRB10-interacting GYF protein 1 isoform X1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lroh03019
]
127171969 (gigyf1b)
Messenger RNA biogenesis [BR:
lroh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
127171969 (gigyf1b)
Surveillance factors
Other surveillance factors
127171969 (gigyf1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GYF
GYF_2
Activator_LAG-3
CAF1A_acidic
Motif
Other DBs
NCBI-GeneID:
127171969
NCBI-ProteinID:
XP_050976912
LinkDB
All DBs
Position
10:complement(12646513..12663748)
Genome browser
AA seq
1024 aa
AA seq
DB search
MTAETLNFGPEWLRALSRGGSVTSPPPSPAMPKSKLADYRYGREEMLALYVKDNKIPEDM
QDKEFAAILQDEPQQPLALVPLTEEEQRNFSMSVNSVAVLRLMGKGGGAVPTGVARGRGS
TRGGRGRGRGEGGFYQRSVDEEVGFGRGREMHRSQSWDDRGERRFEKPLRRDGGRGGFEE
GGAGGRKDYARSDSENWRILREDQEDDDGAEPGGSWRIAGVRRDDGGPRSAGWRDHGSGE
GRRRKFDFDFRDGEGGRRRAGSEGGEEERDGLPEWCTDEEEGEMGTFDSSGAFMCIKKSS
RDAIPEDQELEFEALKEEEEGGQEDSPVDKSEACEAITVCDGDRKSSSPHAVSAPAPVHP
VAEEDTPKPIVTPPSKPAPQPAEDTAPAGGTTPQTQSSSPPSTTGTDLPTVGGDTEEEDG
MKHLQQEAEKMVASLQDTSLEEECFTQALQESHISAAHTHTHPNTHTHSHSTQHSLSHSA
SALPLSHESAMKWFYKDPQGEIQGPFTTVEMCEWFQAGYFTMNLLVKRGCDEGFQPLGEV
IKMWGRVPFSPGPSPPPLLGNMDQELLKKQLEQAATAALYQQLQMRFQHMNRCGETGMMP
AMNRSMSVPDTGPMWDMPTSVSQQSGGETSLWDLTMSNSAQGPTLEHLQKIQQERREAEL
RKREEEERKRREEKRRQQEEQKRREEEELYRRKQQCRQQQELIMKFLQQSQQQQSVPGGA
GWSSQAGGLSLGKATGKSMALLELEAERLHKQQQQRAQQQQRHGGLTMGQWSDGPSGMWS
GSGMDGKVGGGNPAMGMWDEAMKNQASHRNIGLKNSRSSPSLSDQYMLNRRKRTDDEERL
LKLLQGMKPQDGFTTWCEQMLHALNTSANNSSSVDVPTIVAYLKEVESPYEVHDFIRIYL
GDTIEAKEFAKQFLERRAKQKANHQRQQQQVCKGQFLLKVLFLAFWMSFNVLKFSQLSKE
VSGLNMNFPLQSMFQAAHMNKGGSVYDTQGGKAKKKPSMMLHSDPSILGYSFLGGGELEQ
VEDY
NT seq
3075 nt
NT seq
+upstream
nt +downstream
nt
atgactgctgagacacttaacttcggtccagaatggctccgtgcactatccagagggggg
agtgtgacgtcccctcccccttcccctgcaatgccaaagtccaagttggccgactaccgc
tatggccgcgaggagatgttagcactttatgtcaaagataacaagatccctgaggacatg
caggataaggagttcgctgctatcctgcaggatgagcctcagcagccgttggccttggtg
cccctgactgaagaggagcagagaaacttctccatgtctgtgaacagcgtggctgtgcta
aggcttatgggtaaaggaggtggagctgtaccaacaggtgtagctagagggcgtggaagc
actcgaggtggtcgagggagaggcagaggagagggcggattctaccaaagaagtgtggat
gaagaggttggttttggtcgaggacgagagatgcaccgcagtcagagctgggatgacaga
ggtgagcggcgctttgagaagcccttgaggcgtgatggtgggcgtggtggttttgaggag
ggaggagcaggaggaaggaaggactatgcacgctcagacagtgaaaactggcgtatactc
cgagaagatcaggaggacgatgatggggcagaacctgggggaagctggagaattgctgga
gttcgtcgtgacgatgggggtcctcgttcagccggttggcgggatcacggcagtggggaa
ggccgtcgtaggaagttcgactttgacttccgagatggagaaggcggacgtagaagggct
ggaagtgaggggggagaggaagagcgagatggcctgcctgagtggtgcaccgatgaagaa
gaaggggagatgggtacctttgattcttctggagccttcatgtgcatcaagaaaagctcc
agagatgcaatccctgaagaccaggaactggaatttgaggctctgaaggaggaagaggag
ggtggtcaggaggacagccctgttgataaatcggaagcatgtgaggcaataactgtgtgt
gatggagacagaaagtcatcatctcctcatgctgtgtctgctcctgcccctgtacaccct
gttgcagaggaagacactcccaaacccatagtcactcctccttcaaaacctgcaccccaa
ccagctgaagatacagctccagcaggtggcaccacaccacagacgcagagctcctctcct
ccctcaaccactggtacggaccttccaacagtagggggagacaccgaggaggaagatggc
atgaagcaccttcagcaggaggctgagaagatggtggcgtctctgcaagacacgtccctt
gaagaggaatgtttcactcaggctcttcaggagagccacatctctgcggcacacactcac
acacacccgaatacgcacacacactctcactccacccaacacagtctctcgcactctgcc
agcgctctgcccctgtcccatgaatctgcaatgaagtggttctacaaagaccctcaaggg
gagattcaaggtccattcactacagtggagatgtgtgagtggtttcaggcagggtatttc
accatgaacctgctggtcaaacgtggctgtgacgagggatttcagcccctgggtgaagtc
atcaagatgtgggggcgtgtgcctttctctcccggcccctcccctcctccacttctgggg
aacatggaccaggagctattgaagaaacagttagaacaagctgccactgcagccctgtac
caacaacttcagatgagatttcagcacatgaacaggtgtggggagactgggatgatgcct
gcgatgaacaggtccatgtcagtgccagacaccgggcccatgtgggacatgcctacctca
gtctctcagcagtcaggcggtgagaccagtctgtgggacttaaccatgagtaactccgct
cagggtccaactcttgaacatttgcagaaaatccagcaggagaggcgtgaagctgaactc
aggaagcgtgaagaagaggagagaaaacggagggaggaaaagcgccgacagcaggaggaa
cagaagaggagagaggaggaggagctttatagacgaaaacagcagtgccgtcagcagcag
gaattgatcatgaagtttctgcagcagagccagcagcagcagagcgtgccagggggtgca
gggtggagcagccaggcaggaggtctgtctctgggcaaggctaccggaaagagcatggca
ctcctggagctggaggcagagagacttcacaaacagcagcagcagagagctcagcagcag
caaaggcatggaggtttgacaatgggccagtggagtgatggcccatctggaatgtggtca
ggatctggcatggatgggaaggtcggaggtggcaaccctgctatgggcatgtgggatgag
gccatgaagaaccaggccagccatcgcaacattggcctgaagaacagccgcagcagtccc
tctctcagtgatcagtacatgctgaatcgtcgtaagcgtactgacgatgaggagagactt
ctaaagctgcttcaggggatgaaacctcaggatggtttcaccacttggtgtgaacagatg
ctccacgctctcaacacctctgcaaataactcctcttcagtggatgtgcccaccattgtg
gcatatctgaaggaggtggagtctccatatgaagttcatgacttcatacgcatttacctg
ggcgacaccattgaagccaaagagtttgccaagcagttcctggagcgccgtgccaaacag
aaagcaaaccaccagagacaacagcagcaggtttgtaaaggacaatttctcttgaaagta
ctttttcttgcattctggatgagttttaacgtactgaaattttcacagctgtccaaggaa
gtctctggattgaacatgaacttccccctgcagtcaatgttccaggcagctcacatgaat
aagggcggcagtgtgtacgacactcagggaggaaaagcgaagaaaaagcctagcatgatg
ctccattctgaccccagtatcctcggctactcattcctggggggaggtgagctggagcag
gtggaggattactga
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integrated database retrieval system
