Labeo rohita (rohu): 127171973
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Entry
127171973 CDS
T09007
Name
(RefSeq) HMG box transcription factor BBX isoform X1
KO
K21643
HMG box transcription factor BBX
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lroh03000
]
127171973
Transcription factors [BR:
lroh03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
127171973
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DUF2028
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
127171973
NCBI-ProteinID:
XP_050976918
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Position
10:8182812..8232410
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AA seq
912 aa
AA seq
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MKGGGGGKEPPVEGEVSGKRPKRKCLQWHPLLAKKAPDFSEEEEEEDEEELEKEPVLCAE
SGAQEGECGGMEDDSEEYSSEQRARRPMNAFLLFCKRHRSLVRQEHPRLDNRGATKILAD
WWAVLDPKEKQKYTDMAKEYKDAFMKANPGYKWCPATNKPVKSPSHSVSNARKKVWSLPS
NPSKESSVAKKQPKADSTPQLNFAMADPNKMGGLSMLLLAGEHALTAREISSSSSQTGCT
DVAKHAGKSALFQLAEISSSPAQPAGGSKNAEDTSSLTHVEASGPSQPSSPDLPKSCVKS
PLFQLAEQISSSRSQSASEGKQCGQSALFQLAEMCLASEAEKMEARSSQPSGGSSSLCPQ
HSSSSRVTAEHEEQAEAPELPLTTSSSSSSSSSSSSTSGSTSSSPTDTTPSDLSPCKTPK
KKKKKKENKDLDENPASPKKAKKRHSPESDLDSVMFTIEAVAKGAWGSEETPRKKARPSG
SESSPTTDQSPAVKKKSKPKPKKQLKLKDDGAEEEEEVDEDTNKLQDVEMKSEEAPLTPK
DECENEPDVKVEPPSGVEDMAPHCSPSEPPELEEKDTDNKPPQTRQEDKETEVKPESCGS
RKSERSCKGALYKTLVSEGMLTSLRANVDRGKRGSMRGSVSDHEGGWNDESWGFSQAVTS
NPKKLKKSKSKEETTPGLGKLEEEFEKKFNSLPQYSPLTFDKKSVAVTKKKKNSTSSPPE
PPKPCKGSSSSQKKTLFHKIVNKYKHRKEKSSAADKDIVPTDPVSTESSPAVKSVSPCVS
PSPEPQKVLDTPVGSQKRKARKNKITHLVRTADGRVSPAEAEDKSKDQTKNQDEKPFTQE
TLCNRGVSYDDPRSAEEDVADTSGGLPAFFSLAALAEVAAMENVHRAQRAVSIPTEGQVK
DMAPVLISCADQ
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
atgaagggcggaggtggagggaaagaacctccggtggaaggagaggtcagcggaaagcgg
cccaaacgcaagtgtctgcagtggcacccgctgctggccaagaaagctccagacttctct
gaggaagaggaggaggaagatgaagaggagctggagaaggagccagtgttatgtgcagag
agcggagcacaggaaggagaatgtggcgggatggaagatgacagtgaggaatactcctct
gaacaacgggctcgtcggcccatgaacgcctttctgctgttctgcaaacggcaccgttcc
ctggtccgacaggagcatccgcgactagacaaccggggagccactaagatcctggcagac
tggtgggccgtactggaccccaaagaaaaacaaaaatacacagacatggccaaggagtat
aaagatgcgttcatgaaggctaaccctggttacaaatggtgtcctgccaccaacaagccg
gtaaagagtccctctcactctgtgagtaacgctcgcaagaaggtttggtctcttccatcc
aatcctagcaaggaatcttcagttgccaaaaaacagcccaaagctgacagcacaccccag
ctcaacttcgccatggctgatcctaataagatgggtggcctaagcatgctgctgttagct
ggggagcacgcgctgaccgccagagagatttcctccagctcttcccagacaggatgcaca
gatgttgctaagcacgctgggaaatcagcccttttccagctggctgagatttcttccagt
ccagcacagccagctggaggaagtaagaacgcagaggacacaagctccctcacacatgta
gaggcctctggaccatctcagccaagttcgccagacctgcccaagagttgtgttaaatca
cccttgtttcaactggctgagcagatctcctccagtaggtctcagtcagcatctgaaggg
aagcagtgcggccagtcggctcttttccagctcgctgagatgtgtttggcttctgaggct
gaaaagatggaagctcgatcctcccagccctctggcggttcctcttcactctgtcctcag
cacagttcaagtagccgagtcactgcagagcacgaagagcaggcagaagctcctgaactt
cctctcaccacatcatcatcatcatcatcatcatcctcatcatcctctacctccggctcc
acctcgtcctcccctactgacaccaccccatctgatctcagcccgtgtaagacgccgaag
aagaagaaaaagaagaaagaaaataaagacttagatgaaaaccctgcatcgcccaaaaag
gcgaagaagcgccattcgcccgagtcggacttggacagcgtgatgttcaccatagaagca
gtagcaaaaggtgcgtggggttcagaagaaacacccaggaagaaagctcgtccctcaggg
agtgagagcagcccaacaacggaccaatctccggctgtgaagaagaaatcaaaacctaaa
ccgaaaaaacagctgaagttaaaagacgacggcgcggaggaagaggaagaagtagatgaa
gataccaataaactgcaggatgtagagatgaaatctgaggaagctcctctgactcctaaa
gatgagtgtgagaatgagccagacgtgaaggtggagccacctagtggcgtggaggacatg
gcaccacactgctctccttctgaacctccagaactggaggagaaagacacagacaacaaa
ccacctcaaaccagacaggaagataaagagacggaggttaagccggagtcctgtgggtct
aggaagtcagagcgaagctgtaaaggagcgctttataagactctggtgtccgaagggatg
cttacatcactgagagcaaatgtggacagagggaaaagaggttccatgcgaggaagtgtg
tccgaccatgagggtggctggaatgacgagagctggggattttctcaagctgttaccagc
aacccaaaaaagctcaagaagtccaagtctaaagaggaaaccaccccaggcctaggaaag
cttgaggaggagttcgagaaaaagttcaacagcttaccgcagtacagccccctgactttt
gacaaaaagagtgtggcggtgaccaagaagaaaaaaaacagtacatccagccctcctgaa
ccgcccaaaccctgcaagggttcatcttcatctcagaaaaagaccttattccacaagata
gtgaacaagtacaaacacaggaaggagaaatccagtgccgcagataaagacatcgtccca
actgatcccgtgagtacagaatcaagtccagcggtgaagtcggttagtccgtgtgtgtct
ccctctcctgaaccccagaaggttctggatacgcctgtgggcagtcagaagaggaaggcc
aggaagaataaaatcacacatttggtgcgcacggctgatggccgagtgtcacctgcagag
gcagaagacaaatccaaggatcagaccaagaatcaggatgaaaagccattcactcaagag
acattatgcaataggggggtcagctacgatgaccccagatcagcggaagaggacgtggcg
gacacgtccggtggtctcccggccttcttcagtttagctgctctcgccgaggttgcagcc
atggagaatgtgcacagagctcagcgtgctgtgagcatccccaccgaaggtcaagtgaag
gacatggctcctgtgctgatttcctgtgcggaccagtga
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