Labeo rohita (rohu): 127171977
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Entry
127171977 CDS
T09007
Symbol
nipblb
Name
(RefSeq) nipped-B-like protein B isoform X1
KO
K06672
cohesin loading factor subunit SCC2
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
127171977 (nipblb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lroh03036
]
127171977 (nipblb)
Chromosome and associated proteins [BR:
lroh03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
127171977 (nipblb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
HEAT_EZ
Cnd1
HEAT
Cnd3
ARM_ECM29
ALKBH8_N
Motif
Other DBs
NCBI-GeneID:
127171977
NCBI-ProteinID:
XP_050976928
LinkDB
All DBs
Position
10:complement(1770783..1805088)
Genome browser
AA seq
2814 aa
AA seq
DB search
MNGDMPHVPITTLAGIASLTDLLNQLPLPSPLPATTTKSLLYNGRIAEEVSCLLSRRDDT
LVSQLAHSLNQVSTEHIELKDNLGSDDPEGDVPLLLQTVLSRNPNVFREKSTPTRYGVQG
GLMQQPMIPPYKMPQNSMHGSPASNYQQTTITPSPPSRYVQPQAGSGTRYMPQQNSPVPS
PYAPQSPPGYMQYSHPPSYPQHQQIQQVSVSSPIVPGGMRNIHDNKVSCQVSGNSNHNAR
HCSNDEYISIVQRLGNDESDPAMRNASFPVRSVCSPAGSEGTPKVGSRPPLILQSPPPYT
SPRDAAPDLLLDSPERKKKQKKLIKEEGGKGAMYDIVSSPTKDSTKLTIKLSRVKSSETE
QSAEPLSAVDHGSDAENELSCNSLPYHRNPQERLSAGQCISGEQSAYQQVPVLQNTGALA
AKQPGVVSGTPYDEAELDALAEIERIERESAIERERCSKEVQDKDKPLKKRKQDSYPQEP
GAAGTAGASGTPGVGGGCNAGNKLVPQEACAASNGASRPALMVSIDLQQAGRVEGPVDSC
PVPAAEAQRWPEDGSESTGVLRLKSKTDGEVQRTVDGRPEVIKQRVETTSQKTASDGRPE
TPKHKHENRREISNKVSSEKRSDLSKHRHDGKPDKVRPEGKGHETSRKQEGRSESTRESK
EERQKERDSEGSKVRRPDTSKSSRVEHNRDVDRDQEREKEGESRDKEREKDRDKVRDKEQ
EKDRDKMRDKDQEKDREKDRDKDRDKVREKDRDKLREKDRDKVREKDRDKERVKNRDKER
VKDRDKERVKDRDKEREKDRDKEREKDRDKEREKDRDKEREKDRDKEREKDRDKDREKDR
DKEREKDRDKERVKDRDKERVKDRDKEREKDQDKEQERVRDKDRDRDRDRDQEKKRHAES
TESRDKRSPEQRSRPDSPRVKQESRSGAESKTKAERSVHKTSNNKDEKRSGDKNRLDGHK
PPSSDSKAAEFPNYLLGGKSGALKNFVIPKLKRDKDGNVMQEMRRELFAEPLVKLEKLDL
VEDLNKGAKPVVVLKKLSIDEVHKLISNSRKSSKSRSSYGKSHGETDSRMPLCERVKMNK
RRRSSTNEKPKYAEVSSDDDNSSVELPPKRSKKDRDKAWEYEEKERRGSGDHRRSGGHSD
SRRGSGSRYRDRSPVDSDEDSPPPSLSDLARKLKKKEKQKKRKAYEPKLTEDEMMDSSTF
KRFSTSVDNILENLEDVDLTSLDDDEIPQELLLGKHQLSELSSESAKIKAMGIMHKIPSD
KMVKVQSILEKNIQDGSKLSTLMNHDNDRDDEERLWRDLIMERVTKSADACLTALNIMTS
ARMPKAVYIEDVIERVVQYTKFHLQNTLYPQYDPVYRVDPHGGGTLSSKAKRAKCSTHKQ
KVTVMLYNKVCDIISNLSELLEIQLLTDTTILQISSLGITPFFVENVSELQLCAIKLVTA
VFSRYEKHRQLILEEIFTSLARLPTSKRNLRNFRLNSSDMDGEPMYIQMVTALVLQLIQC
VVHLPSDKDSDDDNDRKVDQDVLITNSYETAMRTAQNFLSVFLKKCGSKQGEDDYRPLFE
NFVQDLLSTVNKPDWPAAELLLSLLGRLLVHQFSNKQTEMALRVASLDYLGTVAARLRKD
AVTSKMDQRSINRILGENSGGDEIQQLQKALLNYLDENVETDPSLMFARKFYIAQWYRDT
STETEKAMKSQRDDDSSDGPHHARDVETTSEILQKAEARKKFLRSVIKTSASKFSSLRVN
SDTVDYEDSCLIVRYLASMRPFAQSFDIYLTQILRVLGESAIAVRTKAMKCLSEVVAVDP
SILARSDMQRGVHGRLMDNSTSVREAAVELLGRFVLSRPQLTEQYYDMLIERILDTGISV
RKRVIKILRDICLEQPTFNKITEMCVKMIRRVNDEEGIKKLVNETFQKLWFTPTPNHDKE
GMTRKILNITDVVAACRDSGYDWFEQLLQNLLKSEEDASYKPAKKACTQLVDSLVEHILK
YEESLADCENKGLTSNRLVACITTLYLFSKIRPQLMVKHAMTMQPYLTTKCNTQSDFMVI
CNVAKILELVVPLMDHPSESFLTTIEEDLMKLIIKYGMTVVQHCVSCLGAVVNKVTHNYK
FVWSCFNRYYGALNKLKLQHQEDPNSTVLVSNKPALLRSLFTVGALCRHFDFDQEEFKGS
NKVVIKDKVLELLLYFTKNEDEEVQTKAIIGLGFLFIQHPGLMFASEVKNLYNCLLADRK
TSVNLKIQVLKNLQTYLQEEDSRMQEADREWKKMSKQEDLKEMGDISSGMSSSIMQLYLK
QVLESFFHTQSSVRHYALNVIALTLSQGLIHPVQCVPYLIAMGTDSEPTMRNKADQQLVE
IDKKYTGFIHMKAVAGMKMSYQVQQAIVDSKDTVVRGFRQDETNTALCSHLYTMVRGNRQ
HRRAFLISLLNLFDDNAKSDVNMLLYVADNLACFPFQSQEEPLFIMHHVDITLSVSGSNL
LQSFKESLLKEPRQREKKKKRGKKYGSEEEDESSRGSSSDSDSSDDVIRRRKKPRRSAAV
NSDSDSDLDLEDVDKVMLRLPDNPEPLLDFANASQGILLLLMLKQHLKNLYGFSDSKIQK
YSPTESAKVYDKAVNRKANVHFNPRQTLDYLTNNLSNGDLTYDVKRRVVRQYLDFKVLME
HLDPDEEDEEGEASASTHARNKAISALLGGSSPKNNAADSYDDDSDADEKAHGSSRRSRR
GGDSAEASGHMNETVEARDVIAICCPKYKDRPQIARVIQKTSTGYSVRWMAGSYSGTWAE
AKKRDGRKLVPWVDTIKESDIIYKKIALTSAHKLSNKVVQTLRSLYAAKEGTSS
NT seq
8445 nt
NT seq
+upstream
nt +downstream
nt
atgaatggggatatgcctcatgttcctatcaccactctcgctgggatcgcaagcctcact
gacctgttaaatcagctgcctctcccttcccctctacctgccaccaccactaagagcctg
ctgtataatgggaggatcgccgaggaggtcagctgtctgctgtcccggcgggacgacact
cttgtgtcccagctggcccacagcctcaaccaggtgtccaccgagcacatagagctgaag
gacaacttaggcagtgatgacccggaaggagatgtgcctctactgctacagacggtgctg
tccaggaaccccaatgtcttcagggagaaaagtacgcccacccgatacggggttcagggc
ggtttaatgcaacagccaatgataccaccgtacaagatgcctcagaattcaatgcatgga
agtccggcgtcaaactaccagcaaaccactataactccgagccctcccagccgatatgtt
caacctcaggcgggttctggtaccaggtacatgccccagcagaacagcccagtgcccagt
ccatatgcgccacagagcccgccaggatacatgcagtacagccacccacccagctaccct
cagcaccaacagatccagcaagtatccgtatccagtccaatagttcctggtggcatgaga
aacatccatgacaacaaggtctcctgtcaagtgtcgggtaactctaaccataatgcgagg
cattgctccaacgatgagtacatcagcatcgtccagagacttggaaatgatgagagtgac
cccgctatgagaaatgcctcctttcctgtacgctccgtctgctcccctgctggaagtgaa
ggaactccgaaagttggatctcggccgcccttgattcttcagtctcctccaccctatacc
tcccctagagatgctgctcctgacctcctgttggactctcctgaacggaaaaagaagcag
aaaaagttaataaaagaggaggggggtaaaggtgccatgtatgacattgtcagctcaccc
actaaagactccacaaagctaacaataaagttgtctcgagtgaagtcttcagagactgag
cagtcagctgagccgttgtcggcagtagaccatggctcagatgctgagaatgaactatcg
tgcaatagcttaccataccaccggaacccccaggaacggctctccgcaggacagtgtatt
tcgggtgagcagtcggcctaccagcaggttcctgtactacagaacactggggcacttgca
gccaagcaacccggggtagttagcggaaccccctacgacgaggcagagttggacgctctt
gctgagatcgaaaggattgagagggaatccgctatagaacgagaacgctgctctaaggaa
gttcaagataaagacaaacctctgaagaagagaaagcaagattcgtaccctcaggaacca
ggagctgcgggcactgcgggtgcttctggaacacctggcgtgggtggcggatgcaatgct
gggaacaaactggtacctcaagaggcttgtgctgctagtaacggagccagtcggccagcc
ttgatggtcagtatagacctgcagcaggcaggcagggtagaagggccagtggactcctgt
cctgtccctgcagcagaggcccagcgctggccagaagatggttctgagtccaccggggtc
ttgcgacttaaatcaaagacagatggagaagtgcagaggacggtagatggtcgtccagaa
gtcatcaagcaacgggtggaaacaacgtctcagaaaacagcttccgatggacgaccagag
actcctaaacacaagcatgagaaccgccgggagatctccaacaaagtgagttcagaaaag
agatcggatctctccaagcacagacatgacggtaaacctgacaaagtgaggcctgaggga
aaaggtcatgaaacttccagaaagcaggaaggacggtcggagtcaactcgggagagcaaa
gaggagaggcaaaaagaacgggacagtgaaggctccaaagtccgacgaccagacacatct
aagtccagtcgggtagagcacaacagggatgtagatcgggaccaggaacgggaaaaagaa
ggggaaagtcgagacaaagagcgagagaaagatcgagacaaggtgcgggacaaggagcag
gagaaagatcgggacaagatgcgggacaaggaccaggagaaagatcgggagaaagatcgg
gacaaagatcgggacaaggtccgggagaaggatagggacaagctacgggagaaagatcgg
gacaaggtgagggaaaaagatcgggacaaggagcgggttaaaaatcgggacaaggagcgg
gttaaagaccgggacaaggagcgggttaaagaccgggacaaggagcgggagaaagaccgg
gacaaggagcgggagaaagaccgggacaaggagcgggagaaagaccgggacaaggagcgg
gagaaagaccgggacaaggagcgggagaaagaccgggacaaggatcgggagaaagaccgg
gacaaggagcgggagaaagaccgggacaaggagcgggtaaaagaccgggacaaggagcgg
gtaaaagatcgggacaaggagcgagagaaggatcaggacaaggagcaggagagggtccgg
gacaaagatcgggacagagatcgagaccgagaccaagaaaagaaacgacacgcagaatca
acagagtcccgggacaagcggtctcctgagcagcgctcacgtcctgacagtcctcgggtg
aagcaggaatcccgtagtggagcagaatccaaaacaaaagctgaacggtcagtccacaaa
acttccaacaacaaagatgagaaacggagtggagacaagaaccgactcgatggacacaag
cctccatcctcggacagtaaagcagcagagtttcccaactacctactggggggcaaatcg
ggtgcattaaagaactttgtcattcccaagttgaagcgggacaaagatggtaacgtgatg
caggaaatgcgacgagagctgtttgccgagccacttgtgaaattagaaaaactggacctg
gtggaggacctcaataaaggtgccaaacctgttgttgttctgaagaagctttccattgat
gaagtccataagttgattagtaattcacgcaagtcaagcaagagcaggtcgtcttatgga
aaatcacatggagagactgattcccgtatgccactgtgtgagagggtgaaaatgaataaa
cgcagacgcagctccactaatgagaagcccaagtatgctgaagtcagctcagatgatgac
aatagctctgtagaattgcccccaaagcgttcaaaaaaggacagagacaaagcatgggaa
tatgaagaaaaggaaaggaggggttctggagatcaccggcgaagtggaggtcactctgac
agccggagaggttcaggcagtcgatacagagatcgcagtcccgtggactcggatgaagat
tcgccccctcccagcctcagtgatcttgccagaaagttgaagaagaaggaaaagcagaaa
aagaggaaagcctacgagcccaaactgactgaagatgaaatgatggactcctccacgttc
aagagattttccaccagtgttgacaatattcttgaaaaccttgaagatgtggacttgaca
tcgttagatgatgacgagattcctcaggagctgctccttggcaaacaccagctctcggag
ttaagcagtgaatcagccaaaataaaggctatgggcatcatgcataagattccatctgat
aagatggtgaaagtccagagtattttggaaaagaacattcaggatggttcaaagctctcc
accctcatgaatcacgacaacgacagggacgatgaggagcgtttgtggcgtgacctcatc
atggaacgtgtcaccaaatctgctgatgcttgtctgacggctcttaacatcatgacctca
gcacgaatgccgaaggccgtttacattgaggatgttatcgagagggtcgtgcagtacact
aagttccatctacagaacacgctgtacccgcagtacgaccccgtctacagggtggaccct
catggtggtggaacgctaagctcaaaagccaagcgagcaaagtgctcaacgcacaagcag
aaagttactgtcatgctctacaacaaagtttgtgacattatcagtaacctgtctgaactc
ttggagattcagctgttgactgacacgaccatccttcagatctcgtctctaggtatcact
cctttctttgttgagaatgtgagcgagttgcagctttgtgccattaaactagtgacggct
gtgttctctagatatgagaagcacaggcagctgatcctcgaagagatcttcacatctctt
gccagactgccaaccagcaagagaaacttgagaaatttcagactgaacagcagtgacatg
gatggggagcccatgtacattcagatggtgacagcgctggttctgcagctcattcagtgt
gtggttcatctaccttctgataaagactcagatgatgataatgacagaaaggttgatcag
gatgtattaatcacaaactcatatgagactgcaatgaggacagcacaaaactttctctca
gttttcctcaaaaagtgtggtagtaagcaaggtgaagatgactacaggccactgtttgag
aactttgttcaggatctgctgtctacagtgaataaacctgattggccagctgcagagttg
ctgctgagccttctgggaaggctgctggttcaccagttcagtaataagcagacagagatg
gctttgagagtagcctctttggattatctgggcacagtggctgcgcgtcttcgcaaagat
gccgtcaccagcaaaatggaccagcgttcaatcaaccgcatcctcggagagaactcaggt
ggtgatgagattcagcagctgcagaaagctctgctgaattacctggacgaaaacgtagaa
actgacccatcactaatgtttgcacggaagttttacatcgcacagtggtacagggacact
agcactgagacagagaaagccatgaaatcgcagagggatgacgactcatccgatgggccg
caccatgccagggacgtcgagaccactagtgagatcttgcagaaagcggaagcacgcaag
aagttcctccggtctgttatcaagacctcggcatcgaaattcagctcactcagagtaaac
tcggatactgtcgactatgaggactcgtgtctaattgtgcggtatctggcctccatgagg
ccgtttgcacagagctttgatatttatctcacacagattttgagagttcttggtgaaagt
gccatcgcggtgagaaccaaagcgatgaaatgtctttctgaagtggttgcggtggatccg
agtattctggcaaggtcggacatgcagcggggagttcatggccggctcatggataattcc
accagtgtgagagaagctgctgtagagctgctggggcgcttcgtattgagtcgaccacag
ctaacggaacagtattatgacatgctgatcgagcgcatcctggacacaggcatcagtgtg
agaaagagagttattaaaatcctgcgggatatctgtctggagcagcccaccttcaacaag
atcacagagatgtgcgtgaagatgatcaggagggtcaatgacgaagaaggcatcaagaaa
ttggtaaatgagacatttcaaaagctgtggttcacccctacacctaatcatgataaagag
ggcatgactcgcaagattctcaacatcacagacgtggtcgctgcatgcagggattccggt
tacgactggttcgagcagctccttcagaacctgctaaagtcagaagaggatgcgtcgtac
aaaccggccaagaaggcttgtacccagctggtggacagtctcgtggagcatattctgaaa
tatgaggagtctctcgccgactgtgagaataaggggctgacatccaatcgcctagtggct
tgtataaccacactctacctgtttagcaagatcagaccacagctgatggtaaaacatgcc
atgactatgcagccatacctgaccacgaagtgtaatactcagagtgattttatggtgatc
tgtaatgtggctaaaatcctggagctcgttgttcctttgatggaccatccgagtgaaagc
ttcctcaccaccattgaagaagacctaatgaaacttatcatcaaatacggcatgacggtt
gtgcagcactgcgtaagttgtctcggtgcggtcgtcaataaggtcacccataactacaag
tttgtgtggtcttgtttcaaccgatactacggagcactgaacaagttgaagttgcagcat
caggaagacccaaacagcaccgtactggtctctaataaaccagcactgctacgttcactc
ttcactgtgggtgccctgtgcagacacttcgattttgaccaagaggagttcaaaggcagt
aataaggtggtcataaaggacaaagtgctggagctgctgctatatttcactaagaatgaa
gatgaggaggtgcagaccaaggccatcattggtctaggcttcctgttcatccagcaccca
gggctaatgtttgcttcagaagtgaagaacctctacaactgcctcctggctgacaggaaa
acgtcagtgaatttgaagatccaggtgctaaagaatctgcagacatacctgcaggaggaa
gactcgcgcatgcaggaagccgacagggagtggaagaagatgtctaagcaggaggaccta
aaggagatgggtgacatttcatctggcatgagcagttctatcatgcagctctacctcaag
caggtgctggagagctttttccacacgcaatccagcgtacggcactatgccctcaatgta
atcgccctgacactcagccaaggcctcattcatcccgtacagtgcgttccgtatcttatc
gcaatgggaaccgactcagaacccacaatgaggaataaagctgatcaacagctggtggag
attgataagaaatacacgggattcattcacatgaaggctgtggcagggatgaagatgtcc
tatcaggtgcagcaagccatcgtggattcaaaggacactgtagtcaggggtttccgacag
gatgagacaaacactgctctttgttcacacctctacaccatggtgcgtggaaacaggcaa
caccgcagggctttcctcatctcgctgctcaacctgtttgacgacaatgcgaagtcagac
gtgaacatgctgctgtatgtcgcggacaatctcgcctgcttcccatttcagagtcaggaa
gagccactgttcattatgcaccatgtagacatcacactatcggtgtccggcagcaacctg
ctgcagtccttcaaagagtctttgctaaaagagcctagacaacgggaaaagaagaaaaaa
cgagggaaaaaatatggctcagaggaagaggatgagagtagcaggggaagcagcagtgat
agcgatagcagcgatgatgtcatccgtcgacgcaagaaacccagacgatccgctgcggtg
aactccgactcagattcagacctcgacttagaggatgtagacaaggtcatgttgcgtctg
cccgacaaccccgagcccttattggactttgccaacgcctctcagggcatcctgctgctc
ctgatgctcaagcagcaccttaagaacctctacggcttctctgacagtaaaatccagaag
tactcgcctacggaatctgcaaaggtctatgataaggctgtaaacaggaaggccaatgtg
catttcaacccacggcagacactggactacctgacaaacaacctgtccaatggagatctt
acttacgatgtcaagaggagagtcgtcagacagtatttagattttaaggtactgatggag
cacttggacccagatgaggaagatgaggaaggcgaagcttcagccagtacccacgccaga
aacaaagccatcagtgctctactaggaggctccagccccaagaacaatgctgctgactcg
tacgacgacgacagtgatgcagacgaaaaggctcatgggtcgtcacggagatccaggaga
ggcggagactccgcagaggcatcaggtcacatgaacgaaacggtagaagccagggacgtc
atcgccatctgctgccccaagtacaaggaccggccgcagatcgcgcgtgttattcagaag
acaagcacaggctacagcgttcgctggatggccggatcgtactccggcacctgggcggag
gccaagaaacgcgacggacggaaactggtgccttgggtggacactatcaaggagtctgac
attatttacaagaaaattgccttgacgagtgcacacaaactgtccaacaaagtagtgcag
actttacgttcactgtacgcagccaaggaaggaacttccagctaa
DBGET
integrated database retrieval system
