Labeo rohita (rohu): 127172028
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Entry
127172028 CDS
T09007
Name
(RefSeq) PDZ and LIM domain protein 2 isoform X1
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
127172028
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lroh04990
]
127172028
Domain-containing proteins not elsewhere classified [BR:
lroh04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
127172028
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Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
LIM
PDZ_2
DUF4749
Cas12f1-like_TNB
DUF6288
Motif
Other DBs
NCBI-GeneID:
127172028
NCBI-ProteinID:
XP_050977020
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All DBs
Position
10:708165..715025
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AA seq
314 aa
AA seq
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MTFQVNLTGPPPWGFRICGGRDFKMTLTVSKVCEGSRAGDAGLQVGDVILEINGQDTGAM
LNMEARNKIKTSEHQLWLLIERPAKTDVIQRFGYLDPRLPVNLEHSVQPKQTHESVQGLS
KSSSQSFRAPLERNYSPEQLKQHGKVSTTGHNSSASDCIQTAVYESQTTKKNISFNYPVW
SYGPVDPEELMRIKRRQLQPQEPRQSNTFRVLQEGLERMSLPSGAVQRSQRFRTCERCGY
IIVTQVVKIRERRYRHVECYTCRDCGFSLMEQGHFWVDEELYCEKHAQERCQTASGLHLP
QAQSKHWRRDLSNQ
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgacatttcaagtgaatttgacaggtccaccaccatggggttttcgtatctgtggagga
agagacttcaagatgaccctgacagtctcaaaggtttgtgaaggtagccgtgcaggtgat
gctgggctgcaagtgggggacgttattttggagattaatggtcaggatactggagccatg
ttgaatatggaggctcggaacaaaatcaagacatctgaacatcagctgtggctacttatt
gaaagacctgcaaaaacagacgtcatacagcgcttcggttaccttgatccaagacttcct
gttaatttggaacactcagtccagccaaaacaaacccatgagtcagtacagggcctgtcc
aagagcagctctcagagcttcagagccccactggagagaaactatagtccagagcagctg
aagcaacatggcaaggtgtccaccacaggacataactcatctgcatctgattgtatccaa
acagcggtgtatgaatcacagactaccaagaaaaacataagctttaattatccagtttgg
agctacgggcctgttgaccctgaagagctgatgagaatcaagagaagacaacttcaacct
caggagcccagacagtccaacactttcagagttctacaggaaggactagaacgaatgtca
ctgccatctggagcggtccagcgaagtcaaagatttcgcacttgtgagagatgtggttac
ataatcgtaactcaggtggtgaagatcagagagagacgctacaggcacgtggagtgctat
acctgcagggattgtggtttcagtctcatggagcaaggacatttctgggtggatgaggag
ctgtactgtgagaaacacgctcaagagagatgccagacagccagtggccttcatttacca
caggctcaatcaaaacactggagacgtgatctctctaaccaatga
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