Labeo rohita (rohu): 127172035
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Entry
127172035 CDS
T09007
Symbol
supt20
Name
(RefSeq) transcription factor SPT20 homolog isoform X1
KO
K21245
transcription factor SPT20 homolog
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
127172035 (supt20)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lroh03036
]
127172035 (supt20)
Chromosome and associated proteins [BR:
lroh03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
127172035 (supt20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt20_SEP
CCDC-167
Motif
Other DBs
NCBI-GeneID:
127172035
NCBI-ProteinID:
XP_050977031
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All DBs
Position
10:4412572..4432229
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AA seq
831 aa
AA seq
DB search
MQQVLEYALDRAEYIVESARQRPAKRRVSSSGRKSLYQKLNELYIEECEKEPELKKLRRN
VNLLEKLVSQESVSCLVVNLYPGNEGYSLMLRGKNGSDSETIRLRYEETELLEYLDAEEL
PPILVDLLEKSQVNIFHCGCVIAEVRDYRQSGNAKMPTYQSRHILLRPTMQTLICDVHAM
TSDHKWTQDDKLQLESQLILATAEPLCLDPSISVSCTTNRLLYNKQKMNTRSMKRCFRRH
SQAALNRQQEMMSHCPALPQLRLLDYLQRRKERKPAPSIDLKISKAGNCVDMWKQSSCQL
TVPSEIDVEKYAVAETFVKLDETQPTVWPAQDVRDDYIFECEVGGQPQRTKVSIFQSMGD
PLVYGKIYSAKDSKSEEDVTDLHLIHPPFLIGSKTDADRFLTQYKEVYERDVKCQVKMLH
NSGSAGSQGQLSPSRENEADGFSALVQSSVLGKGVKHRPPPIKLPAGSACASSGNPYSTQ
ASSGHLKCPTPPPTKNQSLSRKHSMELGLLSPAALSPMQRSGTPKPSTPTPTNTPCSTPH
PADVQSATPSVTPTPQDPTLPQQPTLLTPFAQQQMTLPVMTIPLPTSSTTSSQVMTNPAG
LNFINVVGPVCSPQTLMSGSNPMLGCSPGTLASGIPLSGLLPSGGLMSGALPAMQSAAPA
AGGPFGLNNSPGLRPLNLLQLPTGPLIFNSLQQQQLSQFSPQQQSSQSATSSPQQQGEAA
DAGLTAEQGLSAQQTAVINLTGVGGFMSPQAAVLSQLGCGLEGSGPSLPSPRLQQQHQPQ
IQLQFLQHQMQHQQMGMAVGAAAQAALPRQHSANQPKSKRKRSTPQPLPKS
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atgcaacaagtcttagaatatgcattggatcgggctgagtacattgttgaaagtgctcgt
cagcgaccggcgaagagacgagtgtcttcaagtggaaggaaatccttatatcagaaactt
aatgaattgtacattgaagagtgtgaaaaagaaccagagttgaagaaactgaggagaaat
gtgaatctactagagaagctggtctcgcaggagtcagtctcatgtctggtggtcaacctg
taccctggaaatgaaggatactcgcttatgcttagaggaaaaaacggatctgattcagaa
acaatccgacttcgctatgaagagacagagttactggagtacctggatgctgaggagctg
ccgcccatccttgtagaccttctagaaaaatcacaggtgaacatatttcactgtggctgt
gtcatagctgaggtcagggactaccgacagtctggaaatgcaaagatgcccacctaccag
agccggcacatcctgctgagacccactatgcagaccctgatctgtgacgttcatgctatg
acaagtgatcacaagtggacacaggacgataaacttcagctggagagtcagctgattctg
gccacagcagagcctttgtgtctggacccctccatttctgtcagctgcaccaccaaccgt
ctgctctacaacaaacagaagatgaacacgcgatctatgaaacggtgttttagaaggcat
tctcaagcagctctaaacagacagcaggaaatgatgagccactgccctgcgctgccacag
ctcagactcttggactacctgcagaggaggaaagagaggaaacctgctccttccatagac
cttaagatctccaaagctggcaattgtgtggacatgtggaaacagagcagttgtcagctg
actgtcccatcagaaattgatgtggagaagtatgcagtggcagagacctttgtcaaacta
gatgagacccagcccactgtttggcctgcacaggacgtgagggacgactacattttcgag
tgtgaggtaggaggtcagcctcaaagaacaaaagtctctatcttccagtctatgggtgac
ccgctggtgtatgggaaaatctacagcgccaaagactccaaatcagaggaggatgtcaca
gacctgcacctcattcacccaccattcctcataggttcaaaaacagatgctgatcgattt
ctgacgcagtataaggaggtgtatgaacgggacgtgaagtgtcaggtgaagatgttgcac
aactcaggcagtgcagggtcccaaggccagctctccccctccagggaaaacgaggctgat
ggattctcagcgctggtccagtcttcggttttaggaaagggtgtcaaacacagacctcct
cccatcaaactgccagccggctcagcctgcgcctcctcaggtaacccgtacagtacacag
gcctcaagtggccatctcaagtgcccgacccctccacccacaaagaatcagtcgctctcc
cggaaacactccatggagcttggcctgctgtcccctgctgctctctcgcccatgcagaga
tcaggtacccccaaaccctccacacccacacccaccaacacgccgtgttctacgccccac
cctgccgacgttcagagtgccacgccttcggtaacacccacccctcaggaccctaccctt
ccacagcagcccaccctgctgactcccttcgcccaacagcagatgaccctgcccgtcatg
actattcccctgcctacgtccagcaccacgtcctcacaggtcatgacaaaccccgcagga
ctcaacttcatcaacgtggtgggcccggtttgcagtccgcagactctgatgagcggttcg
aacccaatgctgggttgtagtcctggtactttggcgtctggtatacccctgagtggactt
ctgccctctggtggtctcatgtctggagctcttcctgccatgcagtctgcagctccagca
gcaggtgggccttttggcctgaacaacagcccagggctgcgaccgctcaaccttcttcag
cttcctacgggaccactgatttttaactctctacagcagcagcagttgtctcaattctcc
cctcaacagcaaagcagtcagtccgcgacatccagtccccagcagcagggcgaggcggcc
gatgcgggtctgacggcagaacagggtctgtccgcccaacagacggcagtcatcaatctc
accggagtggggggattcatgtctcctcaggcagcagtgctgtcccagctgggttgtggt
ctggaggggtccgggcccagcctaccgtccccgaggctccagcaacagcaccagccacag
atccaattgcaattcttgcagcaccaaatgcaacaccagcaaatgggtatggcagtgggg
gcggcggcacaggcggcgctgccacggcaacattccgccaaccagccaaaaagtaagagg
aaacgcagcacgccacagcccctccccaaatcatga
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