KEGG   Labeo rohita (rohu): 127172042
Entry
127172042         CDS       T09007                                 
Symbol
per1a
Name
(RefSeq) period circadian protein homolog 1a isoform X1
  KO
K21944  period circadian protein 1
Organism
lroh  Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:lroh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lroh03400]
    127172042 (per1a)
DNA repair and recombination proteins [BR:lroh03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    127172042 (per1a)
SSDB
Motif
Pfam: Period_C Per3-like_PAS-A bHLH_PER PAS_11 PAS_3 PAS
Other DBs
NCBI-GeneID: 127172042
NCBI-ProteinID: XP_050977047
LinkDB
Position
10:12422339..12439481
AA seq 1398 aa
MSNDNFQTPETCSTRIGKGRRHKDEGETHSNASPRMTDSQAVCSRLDISTAPQQTHSDDT
DAHSSGNDSAERESDGNMGRGASTCSSHNGKGSTTETTESKRFALNFMCSNGNSPSPPSS
SVSYSLLSGSSEQDQATSQTHNGDQPARLETQRELLKALRELKIRMPTEWHRKGRSSTLA
SLQYALTCVKQVRANQEYYHQWSVEESHGCCLDLSSFTIEELDNITSEYTLQNTDTFSVA
VSFLSGKVVYISSQAASLLRCKPERLQGAVFSELLAPQDVSTFYSGTAPCHLPPWSSCAG
TTSPVDCAEEKSMFCRISRGRDSDGEVKYHPFRLTPYQLTLRDSDTSQPEPCCLLIAERV
HSGYEAPRIPADKRIFTTSHTPNCLFQEIDERAVPLLGYLPQDLVGKPVLIYLHPEDRLL
MVAIHKKILQFAGQPFDHTPLRMRARSGEYLTLDTSWSSFVNPWSRKVAFIVGRHKVRTS
PLNEDVFTALDGGDVRTMSPDVPQLNELIHRVLVQPVHAGSSQGYGSLGSSGSHEHHQGT
TSSSESNGHASEDQIKPRKPMTFEQICQDIHMVKANGQQVFIDSRNRPPALKPSSLEALA
NVADTAEASAREGLASLALSSPPRKELPIVYSYQQINCLDSIIRYLESFNVPGTVKRKCG
SSSCTTSSTSEDDKQREGAGATEDVTETHVVTEGSKVVPAAPAHPLTPLALHCKAESVVS
ATSQCSFSSTIVHVGDKKPPESDIVMMEEPPTTPTPSTPAPPTSVTSPMPMNPQQATSST
AAVLEKEKEKERRGGGTPGKGLTKAVLSAHTQQEEQAFLNRFKDISHLRMVQPSGSPQRR
HTSTPGTKGVNSSQNYPSVGNSSSRRHGRGGKRRKHQVDGNTPDSPCPSGSSPYKGSNPA
PIRPNLPPVQQPSTSWSPSAASQTSGTPMMTSFPPGYMPVYPISSPFSMPQMGADPSMQA
GIPRFPMQGFPPVMPPVMTFMLPNYMFPQLGNQGPQLNPANPQLCTQMNPLGQFPSSIVG
LPSFNPTMGQFNPLGSQMNPAMPSMIPQQFYNPNPMYTFPNSPSMPVGNTNATPHGQSRS
STPQSTGQQAGEREGAGSPLFQSRCSSPLNLLQLEELQSNRTDTMQQTPPPGGVGTQGTG
TVVQNSSNRSNTKDAKLSDSPEVNESNQDAMSTSSDMLDLLLQEDSRSGTGSAASGSGST
GSGSFGSGSNGCSTSGSGTRSSNTSKYFGSIDSSENDHNHKPASKDLGGEQYIKFVLQDP
IWLLMANTDDKVMMTYQIPVKDRESVLKEDRDALKAVQKHQPHFTEDQKKELTQVHPWIQ
TGCLPKAINVTCCTGCESPPDSSDLTPFDLDFHEMDLSTVLREEAKQEDKLTAPETAFPL
SPPSSDNEQRDNQASTSM
NT seq 4197 nt   +upstreamnt  +downstreamnt
atgagtaatgacaacttccaaacaccagagacttgcagtacccgtatagggaagggaaga
agacataaggatgaaggggaaacccacagcaatgcttctcccagaatgaccgacagccag
gcggtttgttccaggctggacatctcaacagcgccccagcagacgcactcggatgacacg
gatgcccactccagcgggaacgactcggccgagagggagagcgatggaaacatgggacga
ggcgcatccacctgcagctctcacaatggaaagggttcaaccacagagactacggaaagc
aagaggtttgctttgaatttcatgtgctcaaatggaaacagtccctctcctcctagcagc
tcggtttcgtacagtcttttgagtggcagttcggagcaggatcaggcgacgtcccaaaca
cacaacggtgaccaacctgcccgactagagacccagagagagctgctgaaggccctgcgc
gagctaaaaatccgcatgccgacggaatggcacaggaaggggcgatcaagcaccctagcc
tccttgcaatacgcacttacctgtgtcaaacaagtccgagcgaatcaagagtactaccat
cagtggagtgtggaagagagtcacgggtgttgtctggacttgtcgtcgtttaccatcgaa
gagctagacaacataacatcagagtacacacttcaaaacacggacacgttctcagtggca
gtgtcgttcctctctggtaaagtggtgtacatctcatcccaagcggcttctctgctccgc
tgtaaacctgagaggctgcaaggggcagttttttcagagctgctcgcgcctcaggacgtc
agtacgttttacagcggcaccgctccttgtcatctaccgccatggtcctcctgcgcaggc
actacttcaccggtggactgtgccgaggaaaagtcgatgttttgtcggatcagcagaggt
agggacagcgatggagaagtgaagtatcaccccttccgtctcacgccatatcagctgacc
ctgagagactccgacacgtcccaacccgagccctgctgcctccttatcgcagagagagtt
cattctggctacgaggcgcctcgcatcccagcagacaagagaatatttaccaccagtcac
accccaaactgtctgttccaagagattgatgaaagggcagtgcctttattaggttacttg
cctcaggacttggtcgggaagcccgtgcttatttatctacatccagaagacagacttctt
atggtggccatccacaaaaaaattctccagtttgcagggcagccgttcgaccacacgccc
ctgcgcatgcgcgcacgaagcggggagtacttgaccctcgacaccagctggtcatcgttc
gtaaacccatggagcaggaaggtggcattcatagtgggacgtcacaaagttcgaacgagt
ccactgaatgaagacgtgttcactgccctggatggcggggatgtgagaaccatgtcccca
gatgtgccgcagctgaatgagctgatccacagggtcctggtgcagcccgttcatgccggc
agctcacaggggtatggcagtctgggcagcagtggctcgcacgagcaccatcaaggcacc
acttcgtcctctgagagtaacggacatgcttccgaggaccagatcaaacccagaaaacca
atgacgtttgagcagatttgtcaagacatacacatggtaaaagccaatggacagcaggtc
ttcattgattcccgaaaccggccgccagctctcaaaccgagtagcttagaagcactggca
aatgtagcagatacagcagaggcctctgctagagaaggtctggcaagtttagctctctcc
agtccacccaggaaggagcttcccatcgtctactcataccagcagataaactgtctggac
agcatcataagatatctggagagctttaatgtccctggcacagtaaaaagaaagtgtggt
tcatcttcctgcacaacgtcttctacctctgaggatgataaacaaagggaaggagctgga
gcaactgaagacgtaacagagactcatgtggtgaccgagggttcaaaggttgtcccagca
gcgccagcgcaccccctaacccctctggctctgcactgtaaggctgaaagtgttgtctcg
gccacctcccagtgtagttttagcagcaccattgttcacgttggtgacaagaagccacct
gaatcagacattgttatgatggaggagccaccaaccaccccgacaccttccacaccagcc
ccacccacctccgtcacctctcctatgcccatgaacccccaacaggccacgtcctccact
gctgctgttcttgaaaaggaaaaggagaaggagagaagaggtggaggcactccagggaag
ggcctcacgaaggcggtgttatctgcacatacccagcaagaagagcaagccttcctcaat
cgtttcaaagacatcagccatctgcggatggtccaacccagcgggtcaccacagcgcaga
cacacatcaacacctgggacaaaaggagtgaacagctcccagaactatccttctgtgggc
aacagtagcagtcgtcgacatggtagaggcgggaaaagacggaaacaccaagtcgacggc
aacacaccggacagtccctgcccctctggatctagcccctacaaagggtccaatcctgca
ccaataagacccaacctccccccagtccagcaaccttccacttcctggtcaccgtctgcg
gcatctcaaactagcggtactcccatgatgacctcctttcccccaggctacatgcctgtg
taccccatttcatcacctttctcaatgccccagatgggagcagatccttccatgcaagca
ggaatccctagattccccatgcaaggctttcctccagtgatgccaccagtcatgaccttc
atgttgccaaactatatgtttccacaactcggtaatcagggaccacagctgaacccagcc
aacccacagctctgtacccaaatgaaccccttgggccagttcccttcttctattgttggt
ttaccgtcgttcaatcccacaatgggacagttcaacccattgggctcccagatgaatccc
gccatgccttcaatgattccccagcaattctacaacccaaatcccatgtacacttttcca
aactctccatcaatgccagtaggaaacaccaatgctacaccacatggacagtctcgctcc
agcacaccccagtccaccggccaacaggctggtgagagggaaggggccggatctcctttg
tttcaatcccgatgctcctccccactcaatcttttacagcttgaggaattgcaaagcaac
agaacagacactatgcaacagactccacccccagggggtgtaggaacacaagggaccggg
actgtggtgcaaaattccagcaatcgcagcaacaccaaagatgccaaactcagtgacagt
cctgaagtcaacgagtccaaccaggatgccatgtcaacctccagtgacatgctggaccta
ctgttgcaagaggactcccgctctggcactgggtctgccgcctcaggctctgggtcaaca
gggtcagggtcattcggatctggatcgaatggatgtagcacatcaggaagtggcaccagg
agcagcaatactagcaaatactttggaagcatcgactcatcagagaatgatcacaatcat
aaaccagcatctaaagatctgggtggggaacagtacataaagtttgtcctgcaggacccc
atctggctcctcatggcgaacacagatgacaaagtcatgatgacataccagattcctgtc
aaagacagagaatcagtactgaaagaagacagagatgccctaaaagctgttcagaagcat
caacctcactttactgaagaccagaagaaagagttaactcaggtccacccttggattcaa
accggctgcctaccaaaggctatcaatgtcacatgttgcacaggatgtgaatctccccca
gattcctcagatcttactccattcgatttggactttcatgagatggatctcagcacggtt
ttgagagaagaggccaaacaagaagataaacttaccgctcctgaaacagcctttcctttg
agcccgccttcatctgataatgaacaaagagacaatcaggccagcacaagcatgtag

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