Labeo rohita (rohu): 127172156
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Entry
127172156 CDS
T09007
Symbol
mef2ca
Name
(RefSeq) myocyte enhancer factor 2ca
KO
K04454
MADS-box transcription enhancer factor 2C
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04010
MAPK signaling pathway
lroh04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
127172156 (mef2ca)
04371 Apelin signaling pathway
127172156 (mef2ca)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lroh03000
]
127172156 (mef2ca)
Transcription factors [BR:
lroh03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box regulators of differentiation, MEF-2
127172156 (mef2ca)
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Gene cluster
GFIT
Motif
Pfam:
SRF-TF
HJURP_C
Motif
Other DBs
NCBI-GeneID:
127172156
NCBI-ProteinID:
XP_050977278
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Position
10:30712228..30766062
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AA seq
477 aa
AA seq
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MGRKKIQIARIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSTNKLFQYAST
DMDKVLLKYTEYNEPHESRTNSDIVETLRKKGLNGCDSPDIDAEDSGHSPESEDKYRKIN
EDIDLMISRQRLCAIPQSNYDMPVSIPVSNPNSLIYSHPGASLGNPNMLPLAHPSLQRNS
MSPGVTHRPPSAGNTGGLLGPDLSSGVGTSAGNGYGNHRNSPGLLVSPGSMSKSMQTKSP
PPMTMTMSNRKPDLRVLIPPGSKNTMPSINQRINNSQSAQSLSTPVVSVATPTLPGQGMG
GYPSAISTSYGTEYSLSSGDLSSLSGFNSPASLHLGSMTGWQQNMQHSGLGHLGNCTSAQ
LCQSSTLSLPSNQSLHIKSEPVSPPRDRAGGTPGGYGQPPPPPPPQPQPTSQQGQLRQDA
GRSPVDSLSSCGSSYEGSDREEHRADFHSPMGLLRPSQDERQSPSVKRMRLSEGWAS
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atggggaggaaaaagattcagattgcgcggataatggacgaacgcaacagacaggttacg
ttcacaaagaggaagtttggactaatgaagaaggcctacgagctgagcgttctgtgtgac
tgtgagatcgccctcatcatcttcaacagcactaataaactgttccagtacgccagcacc
gacatggacaaagttctgcttaaatacactgagtacaacgagccccatgagagtcggact
aattcggatatcgtggagactctgaggaagaagggtctaaatggctgtgacagtcctgat
attgatgctgaagattcaggccacagtccagaatctgaggacaaatatcgtaaaatcaac
gaggacattgacctgatgatcagcaggcagagactgtgtgccatcccccagtctaattac
gacatgcccgtgtcaatccctgtgagcaaccccaacagcctgatctacagccacccagga
gcgtccctgggcaaccccaacatgctgccactggcccacccgtccctccagaggaacagc
atgtcccctggagtgacccaccggcccccgagtgcaggcaacacaggtggccttctgggt
ccagacctcagcagcggagtgggcaccagcgctggaaacgggtatggaaaccaccgcaac
tcccctggtctgctggtctctccggggagcatgagcaagagcatgcaaaccaagtctcct
ccgcccatgaccatgaccatgagcaaccgcaagcccgacctgcgcgtcctgatccctccc
ggctcaaagaacaccatgccctccatcaaccagagaataaacaactcccagtcagcccag
tctctgagcacacctgtggtgtctgtagccacgcccactctgccaggacagggaatgggc
ggctacccatcagccatctctacctcatatggtacagaatattctctcagcagtggagac
ctgtcctctctgtccggttttaacagcccggcttctcttcatctgggttcgatgaccggc
tggcagcaaaacatgcagcattctggtcttggacacctagggaactgcaccagcgcacag
ttatgtcagagctccaccctctcgctgccgtccaatcagagccttcacatcaaatccgaa
cccgtctctcctccccgagaccgggccgggggcaccccgggcggctacgggcagcctcct
ccccctcctccgccccagccgcagccgacatctcagcagggtcagctgcggcaagacgcg
ggccgctctccggtcgacagcttgagcagctgtggcagctcgtacgagggcagcgaccgc
gaggagcaccgtgccgacttccactcgcccatgggactgctgagaccctctcaggacgag
cggcagagcccgtccgtcaagcgcatgcgtctgtccgagggctgggcctcgtga
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