Labeo rohita (rohu): 127172171
Help
Entry
127172171 CDS
T09007
Symbol
slc7a1a
Name
(RefSeq) high affinity cationic amino acid transporter 1 isoform X1
KO
K13863
solute carrier family 7 (cationic amino acid transporter), member 1
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lroh02000
]
127172171 (slc7a1a)
Transporters [BR:
lroh02000
]
Solute carrier family (SLC)
SLC7: Cationic amino acid transporter/glycoprotein-associated
127172171 (slc7a1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AA_permease_2
AA_permease
AA_permease_C
Motif
Other DBs
NCBI-GeneID:
127172171
NCBI-ProteinID:
XP_050977297
LinkDB
All DBs
Position
10:complement(11058206..11092058)
Genome browser
AA seq
650 aa
AA seq
DB search
MMVLKKLLRFGKQLLRVKVVDCNSEESRLSRCLNTFDLVALGVGSTLGAGVYVLAGAVAR
ENAGPAIVLSFLIAALASVLAGLCYAEFGARVPKTGSAYLYSYVTVGELWAFITGWNLIL
SYVIGTSSVARAWSATFDELIGKHIEHFCRQYMSMNAPGILAEYPDMFSVFIILTLTGLL
AFGVKESAMVNKVFTCINILVLLFMVVSGLVKGTLKNWHLDPDEILNETNSTLNSTQPLP
SEEILGEGGFMPFGFTGVLSGAATCFYAFVGFDCIATTGEEVKNPQRAIPIGIVTSLLIC
FVAYFGVSAALTMMMPYYMLDKNSPLPVAFKYVGWEGATYAVAVGSLCALSTSLLGAMFP
MPRVIWAMADDGLLFKFMTGINERTKTPIHATITAGFAAAIMAFLFDLKDLVDLMSIGTL
LAYTLVAACVLVLRYQPEQFSQTYHIASTHDEMEMSETISTPSMGILPGIEERLSFKTLF
FPDITEPSNLSGFTVNICASLLGLLIFSFSLLAVLGGSAMWSIVTLSVLFSMCVIITFII
WRQPESKTKLSFKVPLLPFIPVVSMFVNVYLMMQLDRGTWIRFAIWMSLGLVIYFGYGIW
HSTEASLVHSSMDEELNVYKPACSLNRDSVTPEKEAFLCNGSRVDEDGDL
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgatggttttgaaaaagcttctgcgtttcgggaagcaactgctgagagtcaaggttgtt
gactgcaactcggaggaatcgcgactctcccgatgtctgaacaccttcgacctggtggct
cttggtgtgggcagcaccttgggagctggggtgtatgtcctcgctggagccgtggcccga
gaaaacgccggaccggccatcgttctgtcgttccttatcgctgccctggcctcagtgctc
gcaggcctctgttatgcagagtttggggcgagagtgccaaaaacgggctcagcgtacctg
tatagctatgtgactgtaggggaactatgggcctttataactggctggaatcttatactt
tcatatgttataggtacatcgagtgttgcccgagcatggagtgccacatttgatgagctg
attggaaaacatattgagcatttttgtcgacagtacatgtccatgaatgctccaggcatt
ctggcagagtacccagatatgttttccgtattcatcatcctcactctcacaggcctgttg
gccttcggggtgaaggagtcagccatggtcaacaaagtgttcacatgcatcaacatcctg
gtgctgctgtttatggttgtatctggactggtcaaaggtacgctgaagaactggcacctg
gaccctgatgagattctcaacgaaaccaattccacccttaattccacacagcccctgcca
tcagaagagattctgggtgaaggcgggttcatgcctttcggcttcacaggagtcttatca
ggggcggctacctgcttttatgcctttgttgggttcgactgcatcgcaactacaggtgag
gaggtgaagaacccccagagagccattcccatcggcatcgtcacctccctccttatctgt
tttgtagcgtactttggtgtatcagccgccctcaccatgatgatgccatattacatgctg
gataagaacagcccactccctgtggcctttaagtacgtcggctgggaaggagccacgtac
gctgtggcggtaggctccctttgcgccctgtccaccagcctgcttggcgccatgttcccc
atgccccgtgtcatctgggccatggctgacgatggcctgctcttcaaattcatgactggg
atcaacgagagaacaaaaacacccatacacgccactataacagcaggctttgctgcagct
attatggctttcctgtttgacctgaaggacctggttgatctgatgtctataggaactctt
ttggcctacacgctggtcgctgcctgtgttcttgtactcaggtaccagcccgagcagttt
tctcaaacatatcacatagccagcacacacgatgagatggaaatgagcgagaccataagc
acaccaagcatggggattcttcccggcatagaagagcgtttaagcttcaaaacgctgttc
tttcccgacatcactgaaccctccaacctttcaggcttcaccgttaacatctgcgcgagt
ctgcttggtctgctgatcttcagcttcagtctgctggccgtcctgggcggaagtgcaatg
tggagtattgtcactctcagtgtcctgttcagcatgtgtgtcattatcacgtttatcatc
tggagacaacctgagagtaaaaccaagctctcgtttaaggttcctttactcccattcatc
ccagtggtcagcatgtttgtcaatgtgtacctaatgatgcagctggacaggggtacctgg
atccgatttgccatctggatgtctttaggactcgtaatctactttggctatggaatctgg
cacagtactgaagcctcactggtccattccagtatggacgaggagctgaatgtgtacaaa
cccgcctgcagtctaaacagagacagcgtgaccccggaaaaggaggctttcctctgtaac
ggatcacgggttgacgaggacggagatctttaa
DBGET
integrated database retrieval system
