Labeo rohita (rohu): 127172202
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Entry
127172202 CDS
T09007
Symbol
scarb1
Name
(RefSeq) scavenger receptor class B member 1 isoform X1
KO
K13885
scavenger receptor class B, member 1
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh03272
Virion - Hepatitis viruses
lroh04145
Phagocytosis
lroh04977
Vitamin digestion and absorption
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
127172202 (scarb1)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
127172202 (scarb1)
09150 Organismal Systems
09154 Digestive system
04977 Vitamin digestion and absorption
127172202 (scarb1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lroh04131
]
127172202 (scarb1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lroh04147
]
127172202 (scarb1)
Membrane trafficking [BR:
lroh04131
]
Endocytosis
Phagocytosis
Scavenger receptors
127172202 (scarb1)
Exosome [BR:
lroh04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
127172202 (scarb1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CD36
Motif
Other DBs
NCBI-GeneID:
127172202
NCBI-ProteinID:
XP_050977360
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Position
10:complement(30240473..30262147)
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AA seq
526 aa
AA seq
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MAVSKSTLSIVFIVLGGLAVLFGTVLVFVGPIIIDDQIVKNVEINPNNGLSYTMWKDIPV
PFFMSVYFFHIVNPKEILKGEKPTVVQRGPYVYRENRWKDNITFHDNNTVSYKEYRQYFF
DESMSVGNESDVVTIPNMLVLGASIMMEKMPLPVRLLLSTTFKTFNEGPFLTKPVGELMW
GYDSKLVDFLNTYLPGMLPTNGKFGLFAEFNNSNTGQFTVNTGRDDIRKVHMVDSWNGLK
SVNYWRSEQCNMINGTAGQMWPPFMTTESTMPFYSPDACRSMELVYQRPGVSRGIPVYRF
VAPKTLFASGADYPPNEGFCPCRQSGLLNVSTCRHNSPVFISHPHFFEADPFLLGTVNGL
SPNEDEHGLFIDIHPETGVPMNVSIRLQLNLLIKSVLGISETGKIAEVVMPMIWFEESGY
IDGPILNTFRTNLVVLPMVMEYMQYIFIALGLTGILGAVILYVTDKKARKKTSVSLTQGV
STNYLYMHIQKTKITMRITIRNVYMHVVFQISRLFKYLLIIYSHLK
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgtctaaatcaacgttatcgatcgtttttattgttttgggaggtttggcggtt
ttattcgggactgtgctggtgtttgtcggacctattataatagacgatcaaatcgtgaag
aatgtagagattaacccgaacaatggactctcctacactatgtggaaggacatcccagtt
cccttctttatgtctgtatatttctttcatattgtcaatcctaaagaaatcctaaaagga
gaaaagcctacggtggtacagagagggccgtatgtgtatcgtgaaaatcgctggaaggac
aacatcacatttcatgacaacaacaccgtatcgtataaggaatatcggcagtatttcttt
gacgagagcatgtctgtgggaaatgaatctgatgtggtcaccatccctaacatgctagtg
ctgggtgcatcaataatgatggagaaaatgccccttcctgtacgcttgctgctcagcacc
acgttcaagaccttcaatgagggccctttcttaacaaaaccggttggagaactcatgtgg
ggttatgacagcaagttagttgacttcctgaacacatacctccccggcatgctcccaacc
aacgggaagtttggcttatttgctgagtttaacaactccaacactggacagttcactgtc
aatactggtcgagacgacatccggaaagttcatatggtggactcttggaatggcctgaaa
agcgtgaattactggaggtctgagcagtgtaacatgatcaacggtacagcgggtcaaatg
tggcctccgttcatgaccacagagtcgacgatgcccttctacagccctgatgcgtgcagg
tccatggagctggtgtaccaaaggccaggcgtgtcgcgtgggattcccgtgtatcgcttc
gtggccccgaagactctttttgccagcggtgcagattatcctccgaatgagggcttttgt
ccgtgtcgacagtccggccttctcaacgtcagcacctgcagacacaattcccctgtgttc
atctcccatccacacttttttgaggctgatccctttcttttgggcacagttaatgggttg
agcccaaatgaagatgaacatgggcttttcatcgatattcacccagagaccggagtgccg
atgaacgtgtccattcggctgcagctcaacctgctcataaagagtgtattgggcatctca
gaaacaggaaagatagctgaagtggttatgcccatgatctggtttgaagagagcggttac
atcgacggtcccatcctcaacacgttccgcactaatctggtggtgctgcccatggttatg
gagtacatgcagtacatcttcattgctctcggactcacaggcattttgggagccgtgata
ttatacgtcactgacaagaaagccaggaaaaagacatcagtttctctcacacaaggggtc
agcaccaactatttatatatgcatattcaaaaaacgaagattactatgagaattacaatc
agaaatgtgtacatgcatgtcgtttttcagatctccagactttttaaatatcttttgatc
atttacagtcatttaaagtaa
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