Labeo rohita (rohu): 127172204
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Entry
127172204 CDS
T09007
Symbol
ubc
Name
(RefSeq) polyubiquitin-C
KO
K08770
ubiquitin C
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh03320
PPAR signaling pathway
lroh04120
Ubiquitin mediated proteolysis
lroh04137
Mitophagy - animal
lroh04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
127172204 (ubc)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
127172204 (ubc)
04137 Mitophagy - animal
127172204 (ubc)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
127172204 (ubc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lroh04121
]
127172204 (ubc)
Ubiquitin system [BR:
lroh04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
127172204 (ubc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
DUF2604
TBK1_ULD
Ubiquitin_5
OTU1_UBXL
Motif
Other DBs
NCBI-GeneID:
127172204
NCBI-ProteinID:
XP_050977365
LinkDB
All DBs
Position
10:complement(30268143..30270453)
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AA seq
457 aa
AA seq
DB search
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR
LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ
QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGN
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgcagatctttgtaaagacgctgactggcaagaccatcaccctcgaggttgagcccagc
gacaccattgagaatgtgaaggctaaaatccaagacaaggaaggcattcctcctgaccag
cagcgtctgatcttcgctggcaagcagttggaagatggacgcaccctctctgactacaac
atccagaaggaatccaccctccatctggtactgcgtctgcgaggtggtatgcagatcttc
gtcaagacgctgactggcaagaccattacccttgaggttgagcccagcgacaccattgag
aacgtcaaggccaagatccaggacaaggagggcattcctcctgaccagcagcgtctgatt
ttcgccggcaagcagttggaagatggacgcaccctgtccgactacaacatccagaaggaa
tccaccctccacctggtgctccgcctcaggggaggcatgcagatcttcgtcaagaccttg
actggtaaaaccatcactcttgaggtggaaccaagtgacaccattgagaacgtcaaggcc
aagatccaagacaaggaaggcattcctcctgaccagcagcgtctgatcttcgctggcaag
cagctggaagatggacgcacactgtccgactacaacattcagaaggagtccaccctccat
cttgtcctgcgtctaagaggtggtatgcagatcttcgtcaagacgctgactggcaaaacc
atcactttggaagttgagcccagtgacaccattgagaacgtcaaggccaagatccaagac
aaggaaggcattcctcctgaccagcagcgtctgatcttcgctggcaaacaacttgaagat
ggacgcacgctgtccgactacaacattcagaaggagtccaccctccacctggtgctccgc
ctcaggggaggcatgcaaatcttcgtcaagacgctcactggcaagaccatcaccctcgag
gttgagcccagtgacaccattgagaacgtcaaagctaaaatccaagacaaagagggcatt
ccacctgaccagcagcgtctgatcttcgccggtaagcagctggaggatggacgcacgctg
tccgactacaacatccagaaggagtccaccctccacctggtgctccgcctcaggggaggc
atgcagatcttcgtcaagacgctgactggcaagaccatcacccttgaggtcgagcccagc
gacaccattgagaacgtcaaggccaagatccaggacaaggaaggcattcctcctgaccag
cagcgtctgatcttcgccggtaagcagctggaggacggacgcaccctgtccgactacaac
atccagaaggagtccaccctccatctcgtcctgcgccttcgtgggggcaattaa
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