Labeo rohita (rohu): 127172223
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Entry
127172223 CDS
T09007
Symbol
xrcc4
Name
(RefSeq) DNA repair protein XRCC4 isoform X1
KO
K10886
DNA-repair protein XRCC4
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
127172223 (xrcc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lroh03400
]
127172223 (xrcc4)
DNA repair and recombination proteins [BR:
lroh03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
127172223 (xrcc4)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XRCC4_CC
XRCC4_C
XRCC4
XLF
KxDL
Motif
Other DBs
NCBI-GeneID:
127172223
NCBI-ProteinID:
XP_050977395
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Position
10:complement(30947417..30995097)
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AA seq
352 aa
AA seq
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MRCRSTSVRQISIASEPDRTFFLKLDWAGDLGSGFVILLSDGISAWSGEVSEEDVSREAQ
EIEMERERYVGDLHLALTGEGPAAEGQYSFHLTPERPGRPLLQLSYEKVQNDISFRLGVV
DLQAVPEPTEVIRELISHGLEQSARLQAKNQHLLEENQKLRREQEHITKEMERYVHGKET
LERDLYSRFVLVLNEKKAKLRDLQKRVKELEESVEKNRLRKKADNDNNETMETAAEKSPG
EESDYGGSTEDEQEAEPRQPDSKPLTQEMPESNPMDDSLNDITDVAPCRKRRHRHLQQLE
TEAKRAALDQRQRSREKPTEEARAETSKTSNIQPKPASAAANLDPDDLFDDI
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgaggtgtcgcagcactagtgtgcgtcagatctccattgcctctgagcctgatcgcaca
ttttttcttaagttagactgggctggggatcttggatctggctttgttatccttctgtcc
gatggcatctctgcatggagtggtgaagtttcagaggaggatgtgtcccgtgaagctcag
gagatcgagatggagcgggagcggtatgttggtgacctgcacctggctctgaccggagag
ggaccggcagcggagggccaatacagcttccacctgacacctgagagacccggtcgcccc
ctgctgcagctgtcttatgagaaggtgcagaacgacatctcgttcaggctcggcgtagtg
gacctgcaggcggtgcctgagcccactgaagtcataagggagctcattagtcacggcctg
gagcagagcgcacgtctacaggccaaaaaccagcacctgcttgaggagaaccagaagctg
aggagagaacaagaacacatcactaaagagatggaaaggtacgtccacgggaaggagacg
ttggagagagatctgtacagccgatttgtgctggtcctaaatgagaagaaggccaaactc
agagacctgcagaagagggtcaaagagctggaggaatctgttgaaaagaatcgacttagg
aaaaaggcagataatgacaacaacgaaacaatggagactgcagcagaaaagagtcctgga
gaagagagtgattatggaggcagtacagaagatgaacaggaggctgaacccagacagcct
gactcgaagcctcttacacaagagatgccagaaagcaacccgatggacgacagcctaaat
gacatcacagatgtggccccctgccgcaaacgccgccaccgacatctccaacagctggag
actgaagccaaacgagcagctctggaccagcgacagagatccagagagaagccgacagag
gaggccagagccgagaccagcaaaacgtcaaacatccaaccgaaaccagcaagcgctgct
gcgaaccttgatccagacgacttgttcgatgatatatga
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