Labeo rohita (rohu): 127172272
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Entry
127172272 CDS
T09007
Symbol
rfc3
Name
(RefSeq) replication factor C subunit 3
KO
K10756
replication factor C subunit 3/5
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh03030
DNA replication
lroh03410
Base excision repair
lroh03420
Nucleotide excision repair
lroh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
127172272 (rfc3)
03410 Base excision repair
127172272 (rfc3)
03420 Nucleotide excision repair
127172272 (rfc3)
03430 Mismatch repair
127172272 (rfc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lroh03032
]
127172272 (rfc3)
03036 Chromosome and associated proteins [BR:
lroh03036
]
127172272 (rfc3)
03400 DNA repair and recombination proteins [BR:
lroh03400
]
127172272 (rfc3)
DNA replication proteins [BR:
lroh03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
127172272 (rfc3)
DNA Replication Termination Factors
ELG1-RFC complex
127172272 (rfc3)
Chromosome and associated proteins [BR:
lroh03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
127172272 (rfc3)
DNA repair and recombination proteins [BR:
lroh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
127172272 (rfc3)
Check point factors
HRAD17(Rad24)-RFC complex
127172272 (rfc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC_C
RCF1-5-like_lid
DNA_pol3_delta2
Rad17
AAA
AAA_22
AAA_16
ABC_tran
AAA_11
DUF2247
AAA_5
Motif
Other DBs
NCBI-GeneID:
127172272
NCBI-ProteinID:
XP_050977468
LinkDB
All DBs
Position
10:4841938..4845612
Genome browser
AA seq
356 aa
AA seq
DB search
MSLWVDKYRPSSLAKLDYHKEQANQLKNLVQCGDFPHLLVYGPSGAGKKTRIMCLLRELY
GPGVEKLRIEHQSITTPSKKKLEINTIASNYHLEVNPSDAGNSDRVVIQELIKTVAQSQQ
IQSSAQREFKVVLLTEVDRLTKDAQHALRRTMEKYMSTCRLILCCNSTSKVIAPIRSRCL
AVRVPLPSVEEVCSVLSGVCRKEGLLLPPELAKQIAEKSGRNLRKALLMCEACRVQQYPF
SPDQDIPETDWEVFLRETANAIVSQQSPQRLLEVRGQLYELLTHCIPPEVIMKGLVTELL
SNCDGHLKAEVAQMAAYYEHRLQLGNKAVYHLEAFVAKFMAIYKKFMEDGLDNFMF
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgagtttgtgggtggataaatacagaccatcgtccttggctaaactcgactaccacaag
gagcaagcaaaccagctcaaaaatctggtccagtgtggtgattttccacacttgttggtt
tatggaccgtctggtgctggtaagaaaacccggatcatgtgtttgctcagagaactgtac
ggacccggggtcgagaaactcaggattgaacaccagtccatcacgactccttctaaaaag
aaacttgagatcaacacaattgccagcaactaccatttagaggtgaatccaagtgatgct
ggaaacagtgaccgggtggtcatccaggagctgatcaaaactgttgcccagtctcagcag
attcagtccagcgcgcaaagggagttcaaagtggtgctactgacggaggtggaccgtctc
actaaagacgcccagcacgctttgcgccgtacgatggagaagtacatgtccacttgtcga
ttgatcctgtgctgtaactccacatcaaaagtgattgcccccatcaggagcaggtgtctg
gctgtgagagtccccctaccaagtgtggaagaggtctgcagtgttctgtcaggcgtgtgc
aggaaggaggggcttttgcttcctcctgaactagccaaacagatcgccgagaaatcaggc
cgtaaccttcgtaaagccctgctgatgtgtgaggcctgcagagttcaacagtatccattc
tctccagaccaggacatccctgagacagactgggaagttttcctcagagagactgctaat
gctatagtcagccagcagagccctcaaagacttttggaggttcggggacaattgtatgaa
cttctgactcactgcatcccgccagaagtcatcatgaagggcctggtgacagagttgcta
agtaactgtgatggacacttgaaggctgaggtggctcagatggccgcatactacgaacac
agactgcagctgggcaacaaagcagtctaccacctggaggcctttgtagctaaattcatg
gccatctacaagaagtttatggaggatggacttgacaactttatgttctga
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