Labeo rohita (rohu): 127172323
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Entry
127172323 CDS
T09007
Symbol
lhx6a
Name
(RefSeq) LIM/homeobox protein Lhx6 isoform X1
KO
K09375
LIM homeobox protein 6/8
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lroh03000
]
127172323 (lhx6a)
Transcription factors [BR:
lroh03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain LIM
127172323 (lhx6a)
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GFIT
Motif
Pfam:
LIM
Homeodomain
Homeobox_KN
Zn_ribbon_ACC
Zn_Ribbon_TF
Zn_ribbon_3
Motif
Other DBs
NCBI-GeneID:
127172323
NCBI-ProteinID:
XP_050977536
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Position
10:complement(18632266..18651320)
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AA seq
375 aa
AA seq
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MYWKNEALAPLSEGNQFLSEGIPSKQVISPDSHSTPGASRCVDGQHGRAMSQSDGESHRS
NMEKDDTRSSPSPPSTPSICSPTSTASSVPSTGKNVCASCGLEILDRYLLKVNNLIWHVR
CLECSVCRTSLRQHSSCYIKNKEIFCKMDYFSRFGTKCARCGRQIYASDWVRRARGNAYH
LACFACFSCKRQLSTGEEFGLVEEKVLCRIHYDTMVENLKRAAESGSGLTLEGAVPSEQD
SQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTGLSRRVIQVWFQNCRAR
HKKHTPQHSGPPQAHPQARMPPSLPDELHYSPFGSPERARMVALHGYIESHPFSVLTTQS
LPHQAMTLPQLPLSR
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgtattggaaaaatgaggctttggcccctctatcagagggaaatcagtttctatccgaa
ggaattccctcgaaacaggtgatctctccagactcgcacagcacaccgggagcatcacgc
tgcgtggacggacaacacggacgcgcgatgtcacagtctgacggagaatctcacaggtct
aacatggagaaagacgacactcgctcttcgcccagtccgccctcgacgccgtccatctgc
tcgcccacgtccaccgcctcctccgtgccgtccaccgggaaaaacgtgtgcgctagctgc
ggtctcgagatcctggacagatatctgctcaaggttaataatctgatctggcacgtcagg
tgtttggagtgttccgtttgcaggacgtcactacgtcagcacagcagctgctacattaaa
aataaggaaatcttctgtaaaatggattatttcagtaggtttggtacaaagtgcgcccgc
tgtggccggcagatctacgccagcgactgggtacggcgagccagaggcaatgcctaccat
ctggcctgcttcgcctgcttctcctgcaaacggcagctgtccacaggcgaggagttcggg
ctggtggaggagaaagtgctttgtcggattcattacgacacaatggtggagaacctgaaa
cgggctgctgagagcggaagcggactcactctagaaggggcggtgccgtcagaacaggac
agtcaaccaaaaccggctaaaagggcacggacgtccttcactgcagaacagctgcaggta
atgcaagcacagtttgcacaggacaacaaccctgacgctcagactctgcagaagttggca
gacatgacgggactgagtagacgagtcatacaggtctggtttcaaaactgcagagcgaga
cataaaaagcacactccacagcacagcggcccacctcaagctcacccgcaggcccgcatg
cccccctcgctgcccgacgagctgcattactcccccttcggcagtcctgagagagcacgc
atggtggccctgcacgggtacatcgaaagtcatccgttctcggtgctcaccacacagagc
ctccctcaccaggccatgacgttgccacagctccctctcagccgctaa
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