Labeo rohita (rohu): 127172427
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Entry
127172427 CDS
T09007
Symbol
vegfc
Name
(RefSeq) LOW QUALITY PROTEIN: vascular endothelial growth factor C
KO
K05449
vascular endothelial growth factor C/D
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04010
MAPK signaling pathway
lroh04020
Calcium signaling pathway
lroh04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
127172427 (vegfc)
04020 Calcium signaling pathway
127172427 (vegfc)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
127172427 (vegfc)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
lroh04052
]
127172427 (vegfc)
Cytokines and neuropeptides [BR:
lroh04052
]
Cytokines
Growth factors (RTK binding)
127172427 (vegfc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDGF
CXCXC
Motif
Other DBs
NCBI-GeneID:
127172427
NCBI-ProteinID:
XP_050977651
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All DBs
Position
1:24772780..24823589
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AA seq
398 aa
AA seq
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MHLFGISFFCLALFYANLALESTHDYYDYDYDQDQGDAMEDSEPDLVEQLRSAGSVDELM
RIVYPSYWSMLKCRSKIGSRLPHRDHSSTETRSEEASYAAAFINLDIFTSIQTEWRNTLC
MPRQVCLDVGKEFGAATNTFYKPPCVSVYRCGGCCNSEEQVCKNMSTSYISKTLFEITVP
MKYGAKPVTISFANHTSCSCLSKQDLYRQQHSIIRRALPECHVANKTCPKNHSWSDRLCR
CVPLPDTLFSKPHSDIDQDFCGPDKELDEETCQCVCRKELRTAGCGPHRYLDKNTCQCVX
KAKPSSCRPQQSFNKDTCQCTCTKVCPSNQPLNRTKCACECTESPNKCFLKGRRFHQATC
SCVRPPCNVDPKKRGCNDNEYFSDELCRCIPTYWGRLN
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgcacttatttggaatttctttcttctgtctcgcattgttttatgcaaaccttgctttg
gagtcaactcacgactactatgattatgattatgaccaagatcaaggggatgccatggag
gattcagagccagacctggtggagcagttgcgttcagcgggtagcgtggatgagcttatg
aggatagtttaccccagctactggagcatgttgaagtgtcgttccaagataggatcgcgc
ttacctcacagagatcacagctccacagaaacaaggtcggaggaggcctcctatgcggct
gctttcatcaatcttgatatttttacaagtattcagacagagtggagaaacaccctgtgc
atgccacgccaagtttgtttagatgtggggaaagagtttggggcagctacaaacaccttc
tataaaccaccctgcgtgtctgtctacagatgtgggggctgctgtaacagtgaggagcaa
gtgtgcaagaacatgagcacttcatacatcagcaagacgttgttcgaaatcacagttcct
atgaagtatggggccaagccagtcaccataagcttcgccaaccacacttcctgcagctgt
ttgtcaaaacaggatttgtaccgacagcagcactcaataattcgaagggccctaccagaa
tgtcatgtggcgaataaaacatgcccaaagaatcacagctggagtgatcgcttatgcaga
tgtgtgccactgcccgacacccttttttcaaaaccgcattctgacatagaccaggacttc
tgcggccccgacaaagagctggatgaggagacttgtcagtgcgtatgccgaaaagagctg
cgaacggcaggctgcgggccgcaccgctacctggacaagaacacctgtcagtgtgtgnnt
aaagcaaagccctcttcctgcaggccacagcagagcttcaacaaggacacctgccagtgc
acctgcaccaaagtgtgtcctagtaatcagcctctcaaccgcaccaaatgtgcgtgtgaa
tgcacagagtcccctaacaagtgcttcttaaaaggaaggcggttccatcaagccacatgc
agttgtgtcaggccgccatgtaacgtggaccccaagaaaagaggatgtaatgataacgag
tatttcagtgatgaactgtgtcgctgtatacccacatactgggggagactaaactaa
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