Labeo rohita (rohu): 127172454
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Entry
127172454 CDS
T09007
Symbol
frem2a
Name
(RefSeq) FRAS1-related extracellular matrix protein 2a
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
127172454 (frem2a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
lroh04091
]
127172454 (frem2a)
Lectins [BR:
lroh04091
]
C-Type lectins
Lecticans
127172454 (frem2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Calx-beta
Big_9
HdcB
TM_ErbB1
DUF2613
Motif
Other DBs
NCBI-GeneID:
127172454
NCBI-ProteinID:
XP_050977679
LinkDB
All DBs
Position
10:complement(9934155..10018187)
Genome browser
AA seq
3121 aa
AA seq
DB search
MELHRFLILLLSLTGSPTRGVETHGLSYAYTPEVSEDAILVANNGIHVPFGRSVYIDPIN
DLVIEVQPGDRCTITVLENDPLSQRPGHVSPKKFPCEFGPNDVRYSHFGSRSPAGDRVKL
QLRYDTQTETIIIPFMLEVEVVFTQLEIVTKNMPLVVDKLRGTSNPIGRKVLDFTYDKDS
EQCEVTSLVASSTLPRYGKIVDETKLEKMMDCDLFLKSNIRYEHTSTHKSPNKDYIPMVV
ELRSKENNLLKQEFFHVMIRIKEGEENTPPRPSFVAMMMMEVDQFVMTALTPDMLAAEDA
ESNTDDLIFNITSPLSFEEGYIVSTDDRNLPITSFYQRDLKDLKIAYKPPSLDSDTERIF
QIEFEVIDTDGGISDPFAFMIVVKPMNTLAPVVTKNTGQLLYEGQSRSLFTQNNLEVSDE
DNLDNVRITVVDGLRHGHLAVLGTNRKYFTPADLEVGVVVYQHDGSDTYSDNIIFRMSDG
KNDVEFLFPITIVPTDDEPPIINANTGLILFKNQMVPISQLMLSAADIDSEDSTIKFTIE
PPFSAIGEVVVRQSEAPKDPSSWKFNAEDGVYEKVVTEWLQKDITDEKLFYRHTGPHITE
TVTDQFVFKVQDDADPPNRSGENSFIIKILPIDDIPPVLFPGTTLQMTVHEYQLTHLNKN
VLRYTDMDSEDRDLKYTITQPPTDTDENNPIKFGSIVLTDTPDTDVTEFTQAQINHHKIS
YSPPDLELGITPHVVQFHFTVEDTAGNSANGVFTIFLQPVNNKPPQITNTGFTVLERGVH
VITSAELDANDLDTDIKAISFTLSQTPQHGHVQQTFADLKKGSSFKLMDIADGKVSYIHN
GDETTSDSFKLDVSDGVHVVTITVKVAVKLIDDETPTLSLTKGTFGSRLDVLENGATEIT
TSVIQGKDEDTDDLRLTFIVEEAPTFGEILVSGVSSSRFTQADIISGLVVYAHTSGEIGL
ASTEDFFNLTLSDMSDEWTVGGNRVNGVRVHVTILPVDNQTPVVTVGSTFTVFEGDKNTI
GRHQIRVEDADTPTEDILCTIIVQPTSGYVENISPAPGSEKSRSGMAVSAFTIRDVNDGH
IHYVQSIHKGVEPVEDRFTFRCSDGVNFSERQFFPIIIIPTNDEKPEIFMRELVVMEGMN
VIIDTPLLNGVDADVPAEELTFIITKPPNHGFILNQLTSGSVPITNFTLEQIKEASSIIY
EHDDSETTEDKFDVLLTDGKHSAEATIMIMIIPVDDETPRLAINDGLEIEIGETKEINGK
ILKATDLDSDDESLTFIIRYGPGQGFLYRKSPGYVEKRSAGSLENITVGMNFTQNEVNKG
LIFYTHNGQEGIRDLVKFDVTDGINPLIDRYFYITVGSIDMVFPDVISKGVSLKEGGKVT
LTTNLLSTSDLNSPDENLVFTITRAPVRGHLESTDTPGMPIVSFTQLQLAGSKIYYIHTA
DDEVKMDSFEFEVTDGYNPVFRTFRVSIVDVDNKKPVLTIHDLLVSEGQSKLITPFELTV
EDQDTAEHLLKFTVTQLPIHGKLLFNNSRQVTSFTKQDLNENMISYKHDGTESDKDSFSF
TVTDGTHSDFFVFPDTIFETQRPQTMKITIVSVDNDVPQIVVNKGAPTLKVLTGGHLGYQ
ITSKVLKAVDRDSNPEALVFYITAQPEHGYLISLDRGNDSINVFTQADIDDLKICYILKD
ENNATSDVFSFTVEDNGGNKLKNQQFRLNWAWISLEKPNYVVDEQDKVLEVILRRRGFLG
ETSFVGIGTLDGSAEREKDFLGKSQKQVQFNPGQTTATWRVRLLSDGKYEQSETFQIILT
EPVMAVLESPAIATVEIVDPGDESTVFLPQASFAVEEDIGELLIPVQRRGDVSEELMVVC
HTQQGSATGTVPTSVLSYSDYISRPEEQASILRFDKEETEKHCRVVIIDDSLYEGEESFN
VTLSMPMGGRLGPEYPTAHIRILPDQDDAPVFYFGNQEYHVDESDGHVEVRVWRTGTDLS
KKATVTVRSRKTDPVSAEAGVDYVGISRNLEFAPGVSMQTVRVTILDDLGQPVLEGTERF
ELILRMPSSGILGNPVKATIFINDSISDLPKVQFKQAVMTAEESEGHITAVVLRSGDIRH
KSTVRCYTRQGSAQVVSDFDERPNTDTSVVTFLPGESEKPCLLKLVDDSIHEEEEELRLV
LGSAKSDSPYGASIGNQNETLIKIKDSTDKPIIKFAETKFSVSEPKESGQMTLVKIPIRR
TGDVSKVSLVRVHTKDGSAVSGEDYHPISLDVEFKAGEIEHVVEVEILFDGVREMREAFT
VHLKPDENMVAEIQMTKAIVYIEETNSMADVTFPSLPHVVSLLHYDDIRRTKQNGHPPAG
YPVVCVTACNPKYPDYDKTGSICISERINDTLTRYRWLISAPSGPDGVTSPMREADFDTF
FTSSKMITLDSIYFQAGSRVQCAARAVNSNGDEGLELSSPIVSISMEEGMCQPRKLGTVG
AEPFSAKLRYTGAEDPEYANLVKLTVTMPHIDGMLPVVSTRALSNFELTLSPDGTRVGNH
RCSNLLDFNEVSTRHGFLTKATRNIESVGETLPYQYSPVLRGQSTLRFYRNLNLEACLWE
FVSYYDMSELLTDCGGTIGTDGQVLNLVQSYVTLRVPLHVSYVFHSPVGTGGWQHFDLHS
ELRLTFVYDTAILWRDGVGSPPQAELQGALYPTSMRINEQGRLVVNFRTEARFRGLFVAA
HHANLRVQKAAASSVKSIVLSADHPGLTFNLTLVRTEPTYSQPVQQWMFISDFAVRDYSG
TYTLKLIPCTAALNVEYTVPPVCNPREPVTFDLDIRFQQVSDPVAVEFSLNTQMFLLSKK
ALWLSDGSMGFGQESDAAFSEGDTIYGRVMVDPVQNLGDSFYCNIEKVYLCTGADGYVPK
YNPAKSEFGCLADSPSLLYRFKIIDKAQPETQAKSFGDVGFKALLAVDDPTALSLVKQPG
SDGFRLDSTPLFQVAVGREWFIHTIYTVRSKDNAKRGIGKRSVEYHSITSGDLVPADARG
RYRRSNRDVPILAEEIGPENNRGTNIMHIALDRSRRRAASGEELFADGLSPRELSGRGAE
EDAVTVAGVIVGLLLTVLVVIVLALMVRSRRTPAKKAPRVSPSLQPVIVRSSLDNGDSSE
V
NT seq
9366 nt
NT seq
+upstream
nt +downstream
nt
atggaacttcatagatttctcattctcttgctttcattgacaggcagtccaacgcgagga
gttgaaacgcacggattgtcgtacgcgtacacgccagaagtctccgaggacgcgatattg
gtggcaaacaacggcatacacgtgcctttcgggagatctgtttacatcgatccgatcaac
gacttggtcattgaagttcagcctggagacaggtgcactatcaccgttctggaaaacgat
ccgctgtctcagagaccgggacatgtctctcctaaaaagttcccgtgtgaatttggtcct
aacgatgtgagatactctcatttcgggtctaggagccctgcgggggacagggtgaagctg
caactcaggtatgacactcagactgaaactattatcatcccctttatgctagaggtggag
gttgttttcacacagttggagattgttactaagaacatgcctcttgttgttgataaactg
cgtggtactagtaatccaatcggcagaaaggttttagacttcacctatgataaagactct
gaacaatgtgaggtaacatcactggttgccagcagtacacttcctagatatggcaaaatt
gttgatgagaccaaactggagaagatgatggactgcgacctgtttctcaaatcaaatatc
cgctatgagcacacgtctactcacaagtcccctaataaggattacatcccaatggttgtg
gagctgcggagcaaagaaaacaatttactgaaacaggagttcttccatgtgatgattcga
ataaaagagggagaggaaaacactccccccagaccgagttttgtggccatgatgatgatg
gaagttgatcagtttgttatgacagctctaactcctgatatgttggctgcggaggatgca
gaatccaatactgatgatctgattttcaacatcacctctcctttgtcctttgaggagggc
tatattgtgagtacagatgataggaatttacctatcacatccttttatcaaagagatctc
aaagatctgaaaatcgcttacaaacctccctctttggactcggatactgagaggatcttt
caaatcgagtttgaggtcatagacacagatggtggcatttcagatccttttgcttttatg
attgttgtgaagcccatgaatacattagcgccggtagtcactaagaataccggccagctt
ttatatgaaggccagtctaggtctttgtttactcagaacaatttagaagtaagtgatgaa
gacaatctggacaatgtgaggattacagtagttgatggacttcgtcacggccacttagct
gttttgggcaccaacaggaagtattttacaccggctgatctggaggtcggcgttgtggtt
taccaacatgatggcagtgacacgtacagtgataatataatattcagaatgtcagatggc
aagaatgatgtagagtttttgttccccatcacaatcgtacccacagatgatgagccgcct
attataaatgcaaacacagggctgatattattcaaaaatcaaatggtgcccatttcacag
ctcatgcttagtgcagcagacatcgactcggaagattccactattaaatttacaatcgag
cctccattttctgctattggcgaggtcgtggtgaggcaatcagaagcacccaaggaccct
tcctcctggaaatttaatgcagaagatggtgtgtatgagaaagtagtgacggagtggctt
caaaaagacatcacagatgaaaagctcttctacaggcatacaggtccacacatcacagag
acagttactgatcagttcgtttttaaagtacaagatgatgccgatcctcccaaccgatct
ggtgagaattcatttattattaaaattttacctatcgatgatattccacccgtgctgttc
ccaggcactactttgcagatgacggtacatgagtaccagctgactcatttgaacaagaac
gttcttcgctacaccgacatggactctgaagaccgtgacctgaaatacacaataactcaa
ccgccaactgacaccgatgagaacaatcctattaaatttgggtctattgttttgactgac
acccccgatactgacgtaacagaatttacccaagcacaaattaaccatcataagatttcc
tacagcccaccagaccttgagcttggcatcacacctcatgtggtgcagttccatttcaca
gtagaggacactgctggaaacagtgctaatggagtttttacaattttcctccagcctgtg
aacaacaaacccccacagataacaaacactggattcacagtccttgaaagaggggtgcat
gtcatcacaagtgccgaacttgacgcaaatgaccttgatactgacattaaggcaatttca
ttcacgctgagccaaactccacagcacggccatgttcagcaaacctttgctgacttaaaa
aaaggaagtagtttcaaattgatggatatcgctgatggaaaagtgtcgtatatccacaac
ggggatgaaacgacaagtgactcttttaaattggatgttagtgatggtgttcatgttgta
acgataactgtgaaggtagcagtaaagcttattgatgatgaaacaccaacgctcagcctg
acaaagggcacctttggctctcgtttggacgttctggaaaatggtgccacagaaattacc
acaagtgtcatccagggaaaagatgaagacactgatgacctaaggttgacgttcattgta
gaagaagcccctacgtttggagaaattctggtgagtggagtttcctcaagcagattcacc
caagctgatatcatcagtggtctggttgtgtatgctcacaccagtggtgagattggactc
gcatcgacagaagactttttcaacctgaccctctctgacatgtctgatgagtggaccgtg
gggggtaaccgagtaaacggagtacgtgttcatgtcaccattctgcctgtagataaccaa
actccagtggttacagttggcagtacctttactgtctttgagggggataaaaacacaatt
ggcaggcatcagataagagttgaggatgcagacaccccaactgaggacattctgtgcacc
atcattgttcagcccacatcaggatatgtggagaacatctctccagcaccaggctctgaa
aagtcaaggtcgggaatggcagtaagtgctttcaccatcagagatgtgaatgacggtcat
attcactatgtccaaagcatacataaaggagttgagccagtggaggacaggttcacgttt
agatgttcagatggtgtgaatttctccgagaggcagttctttccaattataattatccct
accaatgatgaaaaaccagagatctttatgcgagagcttgttgtaatggaaggcatgaat
gttatcattgacacacctctattgaacggggtcgacgctgatgttcctgcagaagagttg
acgtttatcatcaccaaacccccaaatcatggcttcatccttaatcagcttacaagtggc
tctgtcccaatcacaaatttcactttggagcaaatcaaggaagcctccagcataatttac
gaacatgatgattctgaaaccactgaggacaagtttgacgttcttcttacagatgggaag
cactcagctgaggcgaccatcatgatcatgattatccctgtggatgatgaaacgccaagg
cttgctattaacgatgggcttgaaattgagattggtgagacaaaagagataaacggtaaa
atactgaaagctacagatctggactcggatgacgagtccctcactttcatcattcgctat
ggtcccggccaaggcttcctttatagaaaatcaccaggatatgtggagaaaagatctgct
gggtctctagagaacataacagttggtatgaatttcacgcaaaatgaagtaaacaaaggt
ctcattttctacactcacaatggacaggaaggcattcgagaccttgtgaagtttgatgta
acagatggcatcaatcctcttattgacagatacttttatatcaccgtgggaagcattgac
atggtgtttcctgatgtcatcagcaaaggggtgtctcttaaagaaggtggcaaagtgaca
ctcacgacaaaccttctcagcactagcgatctcaacagccctgatgagaacttagtcttc
accatcacaagagcaccagtgagagggcatttggaaagcacagatacgccaggcatgcct
attgtgtcctttacccaattacagctagctgggagcaagatctactacattcataccgcc
gatgatgaagtcaagatggacagctttgagtttgaggtgaccgatggctacaaccccgtg
ttccgcacgttccgtgtttcaatcgttgatgttgacaataaaaagccggtgctgaccatt
catgaccttctagtgagcgagggacagagcaaactcattacaccctttgagttgaccgtt
gaggaccaagacacagctgagcacctacttaagtttacagtgacccaactacccattcat
ggcaaactgcttttcaataacagtcgacaggtgacttcgttcacaaagcaggacctgaat
gagaatatgatcagctacaaacatgatggtaccgagtcagacaaggacagcttttctttt
acagtcactgatggcacccattctgatttttttgtctttcccgataccatttttgagacc
caaaggcctcagaccatgaagattacaattgtgtcagtggacaacgatgtgcctcagatt
gtggttaacaaaggtgcaccgactttaaaggtcttgaccggaggtcacttaggttatcag
atcacaagcaaagtcctgaaggcagtggacagagacagcaaccctgaggctttggttttt
tacatcactgcacagccagagcatggctacctaattagcctggacagagggaatgactca
atcaacgtcttcacacaagctgacatagatgatcttaagatctgctatatcctgaaggac
gagaacaatgccaccagtgacgtctttagtttcaccgtggaggacaacggagggaacaaa
ttgaagaaccagcagtttcgtctgaactgggcttggatttctctggagaaaccaaattat
gtggtggatgagcaggacaaagttctcgaggtgatcctcagacgtagaggtttccttggc
gaaacgtcttttgttgggattggtactctggatggcagtgctgagagggagaaagatttc
ctgggaaaatcgcagaagcaggtgcagtttaaccctggccagaccacagccacatggaga
gtgaggcttctctctgatgggaaatatgagcagtccgagacgttccagattatcctgact
gagccggtgatggctgttttggagtcgccagcaatagctacagttgagattgtggatcca
ggtgatgagtccacagtgttcttacctcaggccagctttgctgtggaagaagatatcgga
gagctcctgatcccggtgcaaaggaggggagatgtcagtgaggagctgatggtggtctgt
cacactcagcaaggctccgccacaggaaccgtgcccacttctgttctgtcctactctgac
tacatctcccgcccagaggagcaggccagcattctgcgctttgataaggaagagacggag
aagcactgtcgtgtggtgatcattgacgactcgctgtatgagggagaggagagcttcaac
gtgaccctcagtatgcctatggggggccgtctggggccggaataccccactgcgcatatc
cgcatactgcccgaccaggatgacgctccggtgttttattttggcaatcaggagtatcac
gttgatgagagcgacggccacgttgaagtccgtgtatggaggacagggacagacctttct
aaaaaagctactgtcactgtgagatcccgcaaaacagaccctgtttctgctgaagcgggg
gtggactatgtgggaatcagcagaaacttggagtttgcaccgggtgtgagcatgcagacg
gtccgggtcaccatcctggatgacctaggccagcctgttctggaagggacggagagattt
gagcttattctccggatgccgtccagtggaattctgggaaatccagtgaaagccacgatc
tttatcaatgactcaatttcagacttgccaaaagtgcagtttaaacaggctgtgatgact
gcagaggagagtgaaggtcacatcactgcagtggtactccgcagcggagacatcagacac
aagtccactgtacgatgctacactcggcaaggatctgcgcaggtggtgtccgactttgat
gagagacccaacactgacacatccgttgtaactttcttgcctggtgagtctgaaaaaccg
tgcttgctgaagctggtggatgattcgattcatgaggaggaggaggaactgaggctggtt
ctggggagcgcgaaaagtgactcaccgtacggagcgtccataggcaaccagaatgaaact
ctcatcaagatcaaggacagcactgacaagcccatcatcaagtttgccgaaacaaagttc
agtgtaagtgagccaaaagagtcagggcagatgacattggtgaagatccccatccgaagg
acaggagacgtttcaaaagtgtccctggtgagggtgcacacgaaagacggctctgccgta
tctggagaagactaccatcccatctccctcgatgttgagtttaaagccggtgagattgag
catgtggtggaagtggagattttgtttgatggtgtgagagagatgagagaggccttcact
gtccatctgaaaccagatgagaacatggttgctgaaatccagatgactaaagccatagtg
tacattgaggagaccaacagtatggctgacgtcacgttcccttcattgcctcatgtcgtg
tcgctgcttcactatgatgatatcagaagaaccaaacaaaatggtcatccacccgctgga
taccctgtcgtttgcgtcacggcctgcaatcccaaatatcccgactatgacaaaacaggt
tccatctgcattagcgagcgcatcaacgacacgctgactcgttaccgatggctcatcagt
gcccccagtggtccggatggtgtcaccagccccatgagagaggcagactttgataccttc
tttacttcctccaagatgatcaccctagactccatttacttccaagcgggttctagagtg
cagtgcgcggcccgcgccgtgaattccaatggggatgaggggttggagctgagcagcccc
attgtgtctattagcatggaggaagggatgtgccagccacgtaaattgggcacagtaggt
gctgagcccttttctgccaaactacgttacaccggcgctgaagaccctgaatatgccaat
ctcgtcaagcttactgtcaccatgccccacatagacggcatgctccctgtggtctccact
cgtgcactgtccaatttcgagctgactctgagccccgatggcactcgtgtgggaaaccac
aggtgctccaatctgctggactttaatgaggtgtccacacgccatggctttctaaccaag
gccactcggaatatagagagtgtcggggagactctgccgtatcagtacagccccgttctc
agaggccagagcactctacgcttctacaggaacctgaacttggaggcctgtctgtgggag
ttcgtgagttattatgacatgtctgagctgctcacagactgcgggggaacgattggaaca
gatgggcaggtgctgaacctggtgcagtcatatgtgactctgcgagttcctctccacgtc
tcatacgtgtttcattcccctgtgggaacaggaggctggcaacacttcgacctgcattct
gaactgcggctcacctttgtgtatgacactgccatcttgtggagggatggtgtcggcagc
cctccgcaggcagaactgcaaggagctttatatccaaccagcatgaggattaatgagcag
gggaggcttgtggtgaatttccgcacagaagctcgcttcagaggcttgtttgtagcagca
catcatgcgaatttgagggttcagaaggctgcagcatcctctgtgaagtccatagtattg
agtgcagaccacccaggcttgacctttaaccttactctggttaggactgagccgacctac
agccagcctgtccagcagtggatgttcatttcagactttgctgttcgtgattattcaggc
acatacacattgaaactgattccctgtacagcagcgctgaatgtggagtacaccgttcct
ccggtctgcaaccctagagagccggttacttttgatcttgatatccgcttccagcaggtg
agtgaccctgtcgcggtggagttcagtctgaacacacaaatgttcctgttatctaagaag
gcattgtggttgtctgatggatctatgggtttcggtcaggagagtgatgcagctttctct
gagggtgacacaatctatggacgggtgatggtggacccagtgcagaacttgggtgactct
ttctactgtaacattgagaaggtgtatctgtgcaccggcgctgatggatacgttcctaaa
tataaccccgccaagtctgagtttgggtgccttgcagattctccatctctgctgtaccga
ttcaaaattattgacaaagcccagccagagactcaggccaagagttttggggacgtgggt
ttcaaggccctgctggctgtagatgaccccactgccctctctctggtgaagcagccagga
tctgatggcttcaggctggactctactcctcttttccaggtggcagtagggagggagtgg
ttcattcacaccatctacactgtacgttcaaaagacaacgccaagcgtggcattggcaag
cggagtgtagagtaccactcaataacatcaggtgaccttgtacccgcggacgccagagga
cgctatagacggtccaacagagacgtcccgatactggcggaggagatcggacctgaaaat
aaccgaggaacgaatatcatgcacatcgctctggaccgcagccgtcggcgtgctgcgtct
ggggaggagctgttcgcggacggactgtctccacgggagctcagtggacgaggtgcggaa
gaggacgcagtgacggtggcaggagtcatcgtgggactgcttctcactgtcctcgtggta
atagtgttggcactgatggttcgctcaaggcggacgcctgcgaaaaaggccccaagagtc
tcgcccagcctccagcctgttatagttagaagtagccttgataatggtgacagctctgag
gtctga
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integrated database retrieval system
