Labeo rohita (rohu): 127172469
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Entry
127172469 CDS
T09007
Name
(RefSeq) protocadherin-10
KO
K16499
protocadherin delta 2
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lroh04515
]
127172469
Cell adhesion molecules [BR:
lroh04515
]
Cadherins
Protocadherins
127172469
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_3
Cadherin_tail
Motif
Other DBs
NCBI-GeneID:
127172469
NCBI-ProteinID:
XP_050977701
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All DBs
Position
10:complement(13446781..13451500)
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AA seq
969 aa
AA seq
DB search
MEMWIWTWQVSCLALIASVLDVVMAQIRYTIPEELEHGAFVGNIAEDLGLDTSKLSIRRF
RIVSGAKRQYLEVNLENGVLFVNERIDREELCEQNPYCSFHLQVVIENPLELYRVEVEIL
DVNDNSPVFPWSEFNLDISESAAPGSRFPLESAQDLDVGDNSLRSYLLSVNEHFVLDVQT
RSDGSKFAELILESPLDREQQKNHLMVLTAVDGGLPERSGTAQINITVLDANDNAPVFDQ
NFYKVRLVENAPRGTVVIKLNATDLDEGPNGEITYSFSGHAPMRVRELFSVDSRTGEIKV
KGLIDYEKARMHEIYVQAKDKGPSAVAVHCKVMVNIIDVNDNLPEVILTSVSTPVQEDAP
PGTVIAVISVMDKDSGENGNVDCEIPHHVPFQLHSSFKNYYTLVTCDFLDRETISEYNIT
LTARDMGSPPLFTRKTILVQVSDINDNAPRFKQPSYTVYLTENNAPGASICTITAQDADA
DQNSYLSYSILENDIHGMPVSTYVSINSDNGNIYALRSFDHEQLRNFQIVVQAEDAGFPP
LRANVTVNVFVLDQNDNPPVVVSPLPENDTAAVVVVPRYADAGYLVAKITAMDADAGQNS
RLFYEVLQATDLSLFSVALYTGEIRTIRRLLDNDPRRQRLVVLVKDNGQPPLSATASIML
SVVDSVPESLPDFGDLALSPQYRSNLTLYLIVSLGAVSFTFLVAIIVLATIKGLKDRNSC
CGFHSNDSESDVIKKSNLNIHISPGSNRPAHCVEVNGSNPIGQNYCYKMCLTPESSKSDF
MFLKPCSPTGTSSRNNIKEMENKTLTWSPASHSLGTRNGTTSPNELKQGNKDQTLTKNQL
NYTYKSHTSINTGRTLQRRLIQDSDNYAYTSVPQYWTWGNHMHDYKTSSKGGGFPNRSWT
RYNQQDSIQPPPDYQHNVYIPGTPSTLCTLKLANNGDIEVCNSFSTFGKKKKPNNNNQED
AIITNDFFK
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
atggagatgtggatatggacatggcaggtatcctgcctggcgctcatcgcgtctgtgttg
gatgtagttatggcacagattcgttacacgatcccagaggaactggagcacggggctttt
gttggaaatatcgcggaggatctgggactagacacaagcaaactctcaatccgcaggttt
agaatagtctcaggcgcgaagcggcaatatttagaggtgaatttagaaaacggggttttg
tttgtcaacgaacgaattgatcgagaagagttgtgcgaacaaaatccgtactgttcattc
catctccaggttgtgatcgaaaacccattagaattgtatagagtggaagttgaaatatta
gacgtcaacgacaactctcctgttttcccatggagtgaatttaacctggatatttccgaa
tcggccgctcctggttcgcgcttcccactggaaagcgcacaggacctggacgtcggtgac
aactctcttcgctcgtacctgctgagcgtaaacgaacactttgtcctcgatgtccagacg
cgcagcgacggcagtaaattcgcagaactgatcctcgaaagtccgctggaccgggagcag
cagaaaaatcacctgatggttcttacagcggtggacggaggcttgccagaaagatcgggc
actgcgcaaataaacataacggtgctggatgccaacgacaacgctcctgtgttcgatcag
aacttttataaagtaagactagtggaaaacgcgccgagaggcacagtcgtgatcaaacta
aacgcgactgatctcgatgaaggacctaatggagaaatcacgtactcttttagcggccac
gctccgatgagagtgcgcgagttgttcagcgtggattcccgcactggagaaatcaaagtg
aaaggacttatagattacgaaaaagcacggatgcatgagatctatgtacaagccaaggac
aagggaccgtcagcggtggcggtgcattgcaaagttatggtaaacatcatagacgtcaac
gacaatcttccagaagtgattcttacatcggtatccacgcctgttcaagaagacgcgcca
cctggcactgtcatagcagtcataagcgttatggataaagactctggagaaaatggaaat
gttgattgcgaaattcctcatcacgttccctttcagctgcattcctcttttaaaaactat
tataccttagtgacctgtgattttctggacagagagactatttcagaatataacatcact
ctcacggcgcgtgatatgggctcaccgccgctgtttactaggaaaacaattttagtgcaa
gtgtctgacatcaacgataacgctccgcgtttcaaacagccgtcatatacggtttacctg
accgaaaacaacgcgccaggagcctcgatttgcaccatcaccgcgcaagacgcagacgcg
gaccagaattcctacttatcctactctattctagaaaacgacatccatggaatgccggtg
tccacctacgtgtccatcaactcagataacggcaacatttacgcactgcgctctttcgac
cacgagcagttgagaaactttcagatcgtggttcaagccgaagatgctggttttccgcct
ctccgcgcgaacgttacagtcaacgtgtttgttttggatcagaacgacaaccctccagtc
gttgtatcccctttgcccgagaacgacaccgcagcggttgtagttgtccccagatacgct
gacgccgggtacctagtggctaaaatcaccgccatggacgcggacgccgggcaaaactcg
cgtctcttttatgaagtcctccaagctacagatctcagtttgtttagtgttgctctgtac
actggagagatcaggacaattcggcggctgctggacaacgaccccagaaggcagaggctg
gtggttttggtcaaggacaacggtcagccgccgctgtcggccacggcctccatcatgttg
tcagttgttgacagcgtgccagaatccttgcctgattttggtgacctcgcgctcagccct
cagtaccggtcaaacctcacgctgtatttaatcgtatctctgggcgccgtttcattcacg
tttcttgtggctattattgtcctggctacaattaaaggattgaaggacaggaactcgtgc
tgtggatttcattctaacgactccgaaagtgacgtcattaagaagtctaacttgaacatt
catatatcaccgggatcaaacagacccgcgcactgcgtagaagtaaacgggagcaaccca
ataggtcaaaactactgctataaaatgtgtttgactccagagtcatctaaaagtgacttc
atgtttctcaaaccatgcagtccgaccggaacatcttctagaaataacatcaaggaaatg
gaaaataaaactttaacctggagcccagccagccacagtcttggtacaagaaatgggacg
acctccccaaatgaactcaaacagggaaacaaagaccaaaccctgaccaagaaccagctc
aattatacatataaaagccatacttcaataaacacaggcaggacactgcagcgcaggctg
attcaggactcagacaactatgcttacacatctgtcccacagtactggacctggggaaat
catatgcatgattataagacctcatccaaaggtggaggttttccaaatcgctcatggaca
cgttacaaccaacaagattcaattcaacccccaccagactatcagcataatgtttacatt
cccggaacaccatcaacactctgtacgcttaaactggcaaacaatggagacattgaagtc
tgcaactcattctcaacgtttggcaaaaagaaaaagccaaacaataacaatcaagaggac
gcaataataaccaatgattttttcaaatga
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