Labeo rohita (rohu): 127172474
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Entry
127172474 CDS
T09007
Symbol
etf1b
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1b isoform X1
KO
K03265
peptide chain release factor subunit 1
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
127172474 (etf1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lroh03019
]
127172474 (etf1b)
03012 Translation factors [BR:
lroh03012
]
127172474 (etf1b)
Messenger RNA biogenesis [BR:
lroh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
127172474 (etf1b)
Translation factors [BR:
lroh03012
]
Eukaryotic type
Release factors
127172474 (etf1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
baeRF_family10
acVLRF1
Ribosomal_L7Ae
Motif
Other DBs
NCBI-GeneID:
127172474
NCBI-ProteinID:
XP_050977710
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All DBs
Position
10:complement(13498540..13504624)
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AA seq
442 aa
AA seq
DB search
MADDPSAADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQISRVAKMLADEFGTAS
NIKSRVNRLSVLGAITSVQQRLKLYNKVPPNGLVVYCGTIVTEEGKEKKVNIDFEPFKPI
NTSLYLCDNKFHTEALTALLSDDSKFGFIVIDGSGALFGTLQGNTREVLHKFTVDLPKKH
GRGGQSALRFARLRMEKRHNYVRKVAETAVQLFVSNDKVNVAGLVLAGSADFKTELSQSD
MFDPRLQAKVLKLVDISYGGENGFNQAIELSAEVLSNVKFIQEKKLIGRYFDEISQDTGK
YCFGVEDTLKALEMGAVEILIVYENLDTMRYVLRCHGENTTPENDEKILYLTPEQEKDKS
HFTDKETGQEHELIESMPLLEWFANNYKKFGATLEIVTDKSQEGSQFVKGFGGIGGILRY
RVDFQGMEYQGDDDEFFDLDDY
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgaccccagcgcagcggacaggaacgtggaaatttggaagattaagaagttg
atcaaaagccttgaggcggctagaggaaatggcaccagtatgatttccctcatcatccca
cccaaggatcaaatctcgcgtgttgcgaagatgttggccgacgagttcggcaccgcttcg
aacatcaagagcagagtcaacagactctctgtgctgggagccattacctcagtacagcag
agactaaaactgtacaacaaagtgcctcctaatggcctggtggtgtattgtggcaccatt
gtgacagaggaaggcaaagagaagaaagtaaacattgattttgagccttttaaaccaatc
aacacatccttgtatttatgtgacaacaagttccatactgaggctctaacagctctgctg
tcagatgacagcaaatttggcttcattgtgattgatggtagtggtgccctgtttgggact
ttacaaggcaacacaagggaggtgttgcacaaatttactgtggacctgcccaaaaaacac
ggtagaggaggacagtctgctcttcgatttgctcgtttgagaatggagaagagacataac
tatgtgcgtaaggtagcggagacggctgtgcaactcttcgtgtccaatgacaaggtcaac
gtggcaggactggttctcgccggatcggctgacttcaagacggagctcagccagtcagac
atgtttgatccgaggttacaagccaaggttctgaagctggttgacatatcgtatggagga
gagaacggtttcaaccaggccattgagctttcggcggaagtgctgtccaatgtcaagttc
atccaagaaaagaaactaataggtcgatacttcgatgagatcagtcaggacacagggaag
tattgttttggagttgaagacacactcaaagcgctggagatgggagcggtggagattctt
atagtttacgagaacctggacactatgcgttatgtcctacgctgtcatggagaaaatact
acaccggaaaatgatgaaaagatactctatctgacaccggaacaggagaaggacaagtct
catttcactgacaaggagacgggtcaggagcatgagctgattgagagcatgccgctgctt
gagtggttcgccaataactacaagaagtttggggccacgctggaaatcgttacagacaaa
agccaggagggttcgcagtttgtgaaaggctttggaggcattggtggaatcttgcggtac
cgggtggacttccaaggcatggagtaccagggagatgatgatgagttctttgatttagat
gactactag
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