Labeo rohita (rohu): 127172498
Help
Entry
127172498 CDS
T09007
Name
(RefSeq) thrombospondin type-1 domain-containing protein 1
KO
K24433
thrombospondin type-1 domain-containing protein 1
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lroh04990
]
127172498
Domain-containing proteins not elsewhere classified [BR:
lroh04990
]
Thrombospondin domain-containing proteins
Other thrombospondin domain-containing proteins
127172498
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
THSD1_N
THSD1_D3
THSD1_D2
TSP_1
TSP1_spondin
TSP1_ADAMTS
TSP1_CCN
Motif
Other DBs
NCBI-GeneID:
127172498
NCBI-ProteinID:
XP_050977751
LinkDB
All DBs
Position
10:complement(10896747..10906572)
Genome browser
AA seq
871 aa
AA seq
DB search
MTQGFPTATPFVLLFLMGFAMAGIHLWPSMHIALSNASVFVDYSTESNLTDHRITVSLID
IDRNVTVLFRLLPSNQSEGSLEFNCSCFLYAGNFRFRLEQKHNLGVSNRSAIWWWSPVLH
VHWPTFHLAVDRGSNNRSSNDFRIGVYTNDNFHPCSSSKASTVFLDVSYLEQVEIGRKTF
EKVQNRTRHNITVVRSQHVEMPCASLLTERGYIQISLKSPHIQQDIKSSGPLYLSSIFSY
KLLVDNIYKSGCEGAVHVRRIAPPCTVTNGKVLLYKEESNDMAVPSQLAFNFLTQGENET
EFNCSIFDPGRNKYCFHLTLVYSKAPSLAQTCVIVQKHTRMWGPWQPWSGCSVTCGEGVR
ERVRECLLPSSGGMQCTGMVREQSHCSLEDCTEELPPPPLTPPPAVNSPLTGNLVVVAGI
SLCLAVILATIFITVWRKLCRAPKCSSMRRGSLHSPSGRKNSDEASICGHSLQRPSFSES
LQAAPLQKGLTMPAKQGPSDRGVLARQQSMTLPLPLSQDPERMSPSGQKILPPLFGYRLA
QQQLKEMKKKGLKEATQVYHVSQSPVDDTMLEAVASTPTGLTPVPQELDSPEESSSSHFR
IRSAFAEPTWPPKNNALSDRQKVDLLLSPPKTSFSVNSQRLERTADWVEMVERSRVPYSK
NPNFRRTSSFHENNQNQLPPSRPFRERSLTQVTPRQLPEGSCRSRHWEHTLPELEVWSCS
SPRITDNSVDHRRRPWVDTPPSQSNSKDSVPVTPTKEPLVDRHRVARSPSSALDRAERAE
QNWSRRGPSPIQRNILARKLREANSSTCQRQRSSTFSTSEQRRGRCRSLPLSADYSNSPY
NLTESEQHMMDISGYLGEDDGVEVLTIHKLT
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atgacacagggtttccctacagcgaccccatttgtgctgctcttcctgatgggatttgca
atggctggtatccatctctggccatcaatgcacatcgccttgagcaatgctagtgtgttt
gtggattacagcactgaaagcaacttaaccgaccacaggataacagtatcattgattgac
atcgacaggaatgttacagtactcttcaggttgcttccctccaaccaatcagaagggtca
ctggagttcaactgctcttgtttcctgtatgcaggtaatttcagattcagactggagcag
aaacacaaccttggtgtgtctaacaggagtgccatctggtggtggagtccagttctgcac
gtgcactggcccacctttcacctagctgtggatcgtggcagcaacaaccgaagctctaat
gactttaggattggagtgtacactaacgacaacttccatccttgttctagcagcaaagct
tcaactgtcttccttgacgtcagctacctggaacaagtcgagattgggaggaaaaccttc
gagaaggtgcagaaccggacaagacacaatattacagtagttaggtcacagcatgtggag
atgccatgtgcatcccttctgacagagcgtggctacatccagatttccttaaaatcccct
cacatccagcaagatataaaatcctctggtcctctttacctgtccagcatcttctcctac
aagcttcttgtggataacatttacaaaagtggctgtgagggagctgtgcatgtccgtcga
attgctcctccttgtacagttacaaatggaaaagttctgctttataaggaagagagtaat
gacatggctgttccctctcaattggccttcaatttcctcacgcaaggggagaatgagact
gagtttaactgctccatctttgaccctggaaggaataagtactgcttccatttaacactc
gtctacagtaaggctcccagtttagcccagacctgtgtgattgtgcaaaaacatacaaga
atgtggggaccttggcagccatggagtggttgtagtgtaacgtgtggagaaggggtgcgt
gagcgtgttcgtgaatgtctgctgccctctagtggtgggatgcaatgcactggcatggtc
agagagcagtcacactgttcactagaagattgcactgaggagcttccgcctccacccctc
acccctccgccagctgtgaactcgcccctaactgggaatctagtggtagtggctgggatc
tccctatgcctggctgtgatcctggccactatctttatcacagtgtggaggaaactctgc
cgtgctccgaagtgcagctccatgcgccgtggatctctccactctcccagtggtcggaag
aactctgatgaggcttctatctgtggtcacagcttacagagacccagtttctcagaaagt
ctccaagcagctccccttcagaagggacttactatgcctgcaaagcagggaccttcggac
cgaggtgtgttggctcgtcaacagagcatgacccttcctcttccactttctcaagacccg
gagaggatgtctccttctggtcaaaagatccttccacctctttttggctaccgcttggct
cagcaacagctcaaggagatgaagaaaaagggcttgaaagaggccactcaagtctaccat
gtgtcccagagtccagtggatgacaccatgctggaggcagtggcttcaacccctacaggt
ctaactccggtgccccaagaacttgacagcccagaagagtcaagcagcagccacttccgc
ataaggtctgcctttgcagaacccacgtggcctcccaaaaacaacgctttatcagacaga
caaaaagtggacttgttgctgagtcctccgaagacttcatttagtgtcaactcgcaacgt
cttgagcgtacggcagactgggtggagatggtagagcgcagtagagtgccatactccaag
aatcccaacttcagaagaacttcaagcttccacgagaacaaccaaaatcaactgcccccg
tcccgacccttccgagaaagaagcctgacccaggtgactccccgccagctaccagagggg
agctgtagaagcagacactgggagcatacacttcctgaacttgaggtctggtcttgttcc
agtcctagaataactgataactcagtggaccacaggagaagaccatgggttgacactccc
ccatctcagtcaaactccaaagattcagttccagtgacaccaacaaaagaacccttggtg
gatcgtcatcgcgtagcccgaagcccatcttctgcactggaccgagctgaacgggcagaa
cagaactggagcagaagaggtccctcacccatccagaggaacatactagcccggaagctc
agagaggctaattcatctacctgccaaagacaacgcagttccacattttctacctcagag
cagcgcaggggacgctgtcgcagtcttcctctctctgcggactatagcaactccccgtat
aatctcacagagtcagaacagcacatgatggacatttctggatacttgggtgaggatgat
ggagtagaggttctgactattcataaactcacctaa
DBGET
integrated database retrieval system
