Labeo rohita (rohu): 127172584
Help
Entry
127172584 CDS
T09007
Symbol
wdr45
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 4
KO
K22991
WD repeat-containing protein 45
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
127172584 (wdr45)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lroh04131
]
127172584 (wdr45)
Membrane trafficking [BR:
lroh04131
]
Autophagy
Other autophagy associated proteins
Others
127172584 (wdr45)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_EML_2
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_Vps41
BCAS3_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
Beta-prop_IFT80_2nd
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_TEP1_2nd
Motif
Other DBs
NCBI-GeneID:
127172584
NCBI-ProteinID:
XP_050977867
LinkDB
All DBs
Position
10:42020..47459
Genome browser
AA seq
358 aa
AA seq
DB search
MAQQRGVNSLQFNQDQSCFCCAMETGVRIYNVEPLMEKGHLDHEQVGSVALCSMLHRSNL
LAVVGGGVNPKFSEISVLIWDDAREVRDPKDKLVLEFTFTKPVLAVRMRHDKIIIVLKNR
IYVYSFPDNPVKLFEFDTRDNPKGLCDLCPSLEKQLLVFPGHKCGSLQLVDLSNTKPGTS
SAPFTINAHQSEIACLALNQPGSVVASASRKGTLIRLFDTTTRDKLVELRRGTDPATLYC
INFSHDSSFLCASSDKGTVHIFALKDTKLNRRSALARVGKVGPVIGQYVDSQWSLANFTV
PAECACICAFGKNTSKNVNSVIAICVDGTFHKYVFTPDGNCNREAFDVYLDICDDDDF
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atggctcaacagagaggagtcaacagccttcagttcaaccaggaccagagttgtttctgc
tgtgctatggaaacaggtgttcgtatttacaatgtggaacctttaatggaaaagggccat
ttagatcacgagcaggtgggcagcgttgctctgtgttcaatgcttcatcgatcaaacctc
ttggctgtggtgggaggcggcgtcaaccccaaattctctgagatctcagttttaatttgg
gatgatgctcgggaagtgcgagaccccaaggacaaattagttcttgagttcacattcacc
aaaccagtgttggctgtgcgtatgagacatgacaaaatcatcatcgtcctgaaaaacagg
atctacgtgtatagttttcccgacaaccctgtcaagctgtttgagtttgacactcgtgat
aacccgaaaggtctatgtgacctgtgccctagtttggaaaagcagctgttggttttccct
ggacacaaatgtggcagtctacagttagtggacctttccaacaccaaacctggcacatca
tctgctcctttcactatcaacgcacaccagagtgaaatcgcctgcctggcactgaaccag
cccggcagtgtggttgcgtctgcgtccagaaagggcacactgatccgtctgtttgacact
acaacacgagacaagctagtggaactacgaagaggaactgaccctgctacgctctactgt
attaatttcagccatgactcatcctttctgtgtgcatcgagtgacaagggaactgtgcac
atatttgctctgaaagacaccaaactgaatcggcgctctgctttggcgcgtgtaggaaag
gtaggtccggtcatcggacagtatgtggacagtcagtggtctctggctaatttcacggta
ccggctgagtgcgcttgcatctgtgccttcgggaagaacacctccaaaaatgtaaactct
gttattgccatatgtgttgatgggacattccataagtacgtcttcacccctgatggaaac
tgcaaccgcgaggcattcgatgtgtatctggacatttgcgacgatgatgatttctga
DBGET
integrated database retrieval system
